More than 300 homologs were found in PanDaTox collection
for query gene Tgr7_1963 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
637 aa  1266    Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  58.4 
 
 
636 aa  667    Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  47 
 
 
638 aa  582  1.0000000000000001e-165  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  47.41 
 
 
637 aa  572  1.0000000000000001e-162  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  48.42 
 
 
634 aa  563  1.0000000000000001e-159  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  47.64 
 
 
634 aa  560  1e-158  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  47.63 
 
 
634 aa  558  1e-157  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_0567  methyl-accepting chemotaxis sensory transducer  48.42 
 
 
633 aa  528  1e-149  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0539  methyl-accepting chemotaxis sensory transducer  48.42 
 
 
633 aa  527  1e-148  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0563  methyl-accepting chemotaxis sensory transducer  48.42 
 
 
633 aa  524  1e-147  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3773  methyl-accepting chemotaxis sensory transducer  49.07 
 
 
633 aa  508  9.999999999999999e-143  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1479  methyl-accepting chemotaxis sensory transducer  33.28 
 
 
640 aa  356  5.999999999999999e-97  Magnetococcus sp. MC-1  Bacteria  normal  0.0522747  normal  0.0374393 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  58.79 
 
 
674 aa  352  2e-95  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  54.96 
 
 
541 aa  345  1e-93  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  53.11 
 
 
713 aa  337  3.9999999999999995e-91  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  51.01 
 
 
640 aa  332  1e-89  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  52.68 
 
 
712 aa  330  5.0000000000000004e-89  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  52.68 
 
 
712 aa  328  1.0000000000000001e-88  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  54.46 
 
 
716 aa  326  7e-88  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  43.56 
 
 
624 aa  325  1e-87  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  54.96 
 
 
543 aa  322  1.9999999999999998e-86  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  58.26 
 
 
679 aa  318  3e-85  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  47.03 
 
 
540 aa  314  3.9999999999999997e-84  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  59.06 
 
 
523 aa  311  2e-83  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  52.11 
 
 
552 aa  310  5.9999999999999995e-83  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  45.53 
 
 
773 aa  306  5.0000000000000004e-82  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  55.94 
 
 
438 aa  304  3.0000000000000004e-81  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  50.14 
 
 
559 aa  302  2e-80  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2177  methyl-accepting chemotaxis sensory transducer  30.02 
 
 
619 aa  300  4e-80  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0042391  normal  0.0195698 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  47.43 
 
 
548 aa  300  7e-80  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  50.41 
 
 
552 aa  297  4e-79  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  34.92 
 
 
638 aa  296  7e-79  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  49.72 
 
 
633 aa  296  7e-79  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  52.44 
 
 
544 aa  296  8e-79  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  51.2 
 
 
638 aa  295  1e-78  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  51.2 
 
 
638 aa  296  1e-78  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  49 
 
 
640 aa  295  2e-78  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  42.52 
 
 
638 aa  295  2e-78  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  47.96 
 
 
541 aa  294  4e-78  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  52.85 
 
 
561 aa  293  9e-78  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  50.6 
 
 
638 aa  292  1e-77  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  51.01 
 
 
629 aa  292  2e-77  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  53.03 
 
 
561 aa  291  3e-77  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  49.72 
 
 
568 aa  291  3e-77  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  48.18 
 
 
564 aa  290  4e-77  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  46.03 
 
 
568 aa  290  5.0000000000000004e-77  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  51.81 
 
 
552 aa  290  7e-77  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  51.81 
 
 
552 aa  290  7e-77  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  50.72 
 
 
640 aa  289  1e-76  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  46.32 
 
 
558 aa  289  1e-76  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  50.57 
 
 
638 aa  288  2e-76  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  50.43 
 
 
560 aa  288  2e-76  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_007778  RPB_1030  methyl-accepting chemotaxis sensory transducer  34.39 
 
 
653 aa  288  2e-76  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  56.09 
 
 
572 aa  288  2e-76  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  50.42 
 
 
714 aa  288  2e-76  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  43.21 
 
 
638 aa  287  4e-76  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  50.14 
 
 
714 aa  286  5.999999999999999e-76  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  51.34 
 
 
560 aa  285  2.0000000000000002e-75  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  45.92 
 
 
639 aa  285  2.0000000000000002e-75  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  43.21 
 
 
546 aa  284  3.0000000000000004e-75  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  48.42 
 
 
539 aa  284  3.0000000000000004e-75  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  47.61 
 
 
541 aa  284  4.0000000000000003e-75  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  47.47 
 
 
642 aa  284  4.0000000000000003e-75  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_009253  Dred_2461  methyl-accepting chemotaxis sensory transducer  31.29 
 
 
626 aa  284  4.0000000000000003e-75  Desulfotomaculum reducens MI-1  Bacteria  normal  0.670502  n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  44.11 
 
 
554 aa  284  4.0000000000000003e-75  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
636 aa  284  4.0000000000000003e-75  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  48 
 
 
672 aa  283  9e-75  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  48.06 
 
 
558 aa  282  1e-74  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2593  methyl-accepting chemotaxis sensory transducer  46.26 
 
 
540 aa  282  1e-74  Pseudomonas putida W619  Bacteria  normal  normal  0.591477 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  46.45 
 
 
541 aa  282  1e-74  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  46.89 
 
 
554 aa  281  3e-74  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  49.71 
 
 
647 aa  281  3e-74  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  48.5 
 
 
554 aa  281  3e-74  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  45.04 
 
 
554 aa  281  3e-74  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  45.89 
 
 
541 aa  281  3e-74  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  44.77 
 
 
554 aa  280  5e-74  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  44.77 
 
 
554 aa  280  5e-74  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  50 
 
 
650 aa  280  6e-74  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  49.7 
 
 
638 aa  280  6e-74  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  47.88 
 
 
619 aa  280  6e-74  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009052  Sbal_0160  methyl-accepting chemotaxis sensory transducer  47.92 
 
 
653 aa  280  7e-74  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  45.14 
 
 
554 aa  280  7e-74  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  47.44 
 
 
541 aa  279  1e-73  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  46.76 
 
 
544 aa  279  1e-73  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.5 
 
 
554 aa  279  1e-73  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  44.5 
 
 
554 aa  279  1e-73  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  47.16 
 
 
541 aa  278  2e-73  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  45.35 
 
 
541 aa  278  2e-73  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  53.04 
 
 
646 aa  278  2e-73  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  44.5 
 
 
554 aa  278  2e-73  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  44.92 
 
 
554 aa  278  3e-73  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  46.2 
 
 
541 aa  277  3e-73  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  46.63 
 
 
642 aa  277  5e-73  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  48.16 
 
 
596 aa  277  5e-73  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  44.54 
 
 
541 aa  276  6e-73  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  47.46 
 
 
554 aa  276  6e-73  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  47.16 
 
 
541 aa  276  6e-73  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  46.02 
 
 
634 aa  276  7e-73  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  47.76 
 
 
554 aa  276  8e-73  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  46.09 
 
 
425 aa  276  9e-73  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>