More than 300 homologs were found in PanDaTox collection
for query gene Tgr7_1425 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  100 
 
 
438 aa  852    Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  55.94 
 
 
637 aa  303  3.0000000000000004e-81  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  47.32 
 
 
541 aa  278  1e-73  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  49.06 
 
 
638 aa  276  6e-73  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  46.56 
 
 
634 aa  275  2.0000000000000002e-72  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  45.95 
 
 
712 aa  272  9e-72  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  51.27 
 
 
552 aa  270  5e-71  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  44.38 
 
 
713 aa  269  8e-71  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  46.42 
 
 
712 aa  269  8.999999999999999e-71  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.5 
 
 
523 aa  266  5e-70  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  46.06 
 
 
716 aa  266  7e-70  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  47.8 
 
 
543 aa  265  1e-69  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  49.09 
 
 
636 aa  263  4e-69  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  52.58 
 
 
679 aa  263  6e-69  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  42.55 
 
 
638 aa  259  5.0000000000000005e-68  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  44.03 
 
 
634 aa  259  6e-68  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  43.19 
 
 
637 aa  259  6e-68  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  45.61 
 
 
674 aa  257  3e-67  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  48.73 
 
 
552 aa  257  3e-67  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  43.24 
 
 
634 aa  257  4e-67  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
773 aa  256  5e-67  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
568 aa  255  9e-67  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
636 aa  252  7e-66  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  48.65 
 
 
572 aa  252  8.000000000000001e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  44.32 
 
 
541 aa  251  2e-65  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  43.26 
 
 
548 aa  251  2e-65  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
541 aa  250  4e-65  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  50.5 
 
 
624 aa  249  6e-65  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0160  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
653 aa  249  7e-65  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  42.03 
 
 
564 aa  249  1e-64  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  40.16 
 
 
541 aa  247  4e-64  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  42.74 
 
 
671 aa  245  9e-64  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  42.06 
 
 
559 aa  244  1.9999999999999999e-63  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  42.39 
 
 
672 aa  244  3e-63  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  49.33 
 
 
647 aa  243  3e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0539  methyl-accepting chemotaxis sensory transducer  45.09 
 
 
633 aa  243  3.9999999999999997e-63  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0563  methyl-accepting chemotaxis sensory transducer  45.09 
 
 
633 aa  243  3.9999999999999997e-63  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1999  methyl-accepting chemotaxis sensory transducer  41.01 
 
 
405 aa  243  3.9999999999999997e-63  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0567  methyl-accepting chemotaxis sensory transducer  45.09 
 
 
633 aa  243  3.9999999999999997e-63  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  41.6 
 
 
639 aa  243  5e-63  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  42.02 
 
 
573 aa  243  7e-63  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  44.25 
 
 
638 aa  242  9e-63  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
674 aa  241  1e-62  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  39.36 
 
 
638 aa  241  1e-62  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  44.25 
 
 
638 aa  241  2e-62  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  47.33 
 
 
638 aa  241  2e-62  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007954  Sden_2891  chemotaxis sensory transducer  41.71 
 
 
673 aa  241  2.9999999999999997e-62  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2130  methyl-accepting chemotaxis protein  42.3 
 
 
546 aa  239  5.999999999999999e-62  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.665531  n/a   
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  40.46 
 
 
568 aa  239  6.999999999999999e-62  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  46.56 
 
 
646 aa  239  6.999999999999999e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_008740  Maqu_2789  methyl-accepting chemotaxis sensory transducer  42.01 
 
 
545 aa  239  6.999999999999999e-62  Marinobacter aquaeolei VT8  Bacteria  normal  0.888266  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  44.29 
 
 
552 aa  238  2e-61  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1011  methyl-accepting chemotaxis sensory transducer  41.71 
 
 
675 aa  238  2e-61  Shewanella woodyi ATCC 51908  Bacteria  normal  0.547128  hitchhiker  0.00024543 
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  44.29 
 
 
552 aa  238  2e-61  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  44.85 
 
 
411 aa  238  2e-61  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  41.46 
 
 
638 aa  238  2e-61  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  40.96 
 
 
623 aa  237  3e-61  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  42.34 
 
 
640 aa  237  4e-61  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  46.04 
 
 
561 aa  236  5.0000000000000005e-61  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  44 
 
 
544 aa  236  6e-61  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  49.67 
 
 
647 aa  236  7e-61  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  43.49 
 
 
640 aa  236  7e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
674 aa  236  7e-61  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  43.85 
 
 
546 aa  236  8e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  42.86 
 
 
570 aa  235  1.0000000000000001e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  43.21 
 
 
629 aa  234  2.0000000000000002e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  47.25 
 
 
650 aa  234  2.0000000000000002e-60  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  46.04 
 
 
561 aa  234  2.0000000000000002e-60  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  46.67 
 
 
638 aa  234  2.0000000000000002e-60  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  42.93 
 
 
638 aa  233  3e-60  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  42.93 
 
 
638 aa  234  3e-60  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  43.87 
 
 
541 aa  233  4.0000000000000004e-60  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_009831  Ssed_0961  methyl-accepting chemotaxis sensory transducer  44.19 
 
 
675 aa  233  5e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  39.5 
 
 
554 aa  233  5e-60  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  40.17 
 
 
543 aa  233  5e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
560 aa  233  5e-60  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  44.52 
 
 
573 aa  233  6e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  43.11 
 
 
545 aa  233  6e-60  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
540 aa  233  7.000000000000001e-60  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  42.93 
 
 
638 aa  233  8.000000000000001e-60  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_009656  PSPA7_4141  chemotaxis transducer  45.63 
 
 
541 aa  231  1e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  39.44 
 
 
546 aa  231  1e-59  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.04 
 
 
628 aa  231  1e-59  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  39.04 
 
 
628 aa  232  1e-59  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  40.46 
 
 
548 aa  232  1e-59  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  42.3 
 
 
542 aa  232  1e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  41.81 
 
 
541 aa  231  1e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  42.67 
 
 
638 aa  232  1e-59  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  40.9 
 
 
539 aa  231  2e-59  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  42.02 
 
 
572 aa  231  2e-59  Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  39.04 
 
 
643 aa  230  3e-59  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
548 aa  230  3e-59  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  42.5 
 
 
638 aa  231  3e-59  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_48030  putative methyl-accepting chemotaxis transducer  46.6 
 
 
541 aa  231  3e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.478475 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  44.06 
 
 
545 aa  230  3e-59  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  43.49 
 
 
636 aa  229  5e-59  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  41.72 
 
 
554 aa  229  5e-59  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  43.82 
 
 
638 aa  229  6e-59  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  43.82 
 
 
638 aa  229  6e-59  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  43.82 
 
 
641 aa  229  6e-59  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
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