254 homologs were found in PanDaTox collection
for query gene Tgr7_0623 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011901  Tgr7_0623  hypothetical protein  100 
 
 
371 aa  762    Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4266  hypothetical protein  62.53 
 
 
372 aa  474  1e-133  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2962  filamentation induced by cAMP protein Fic  60.38 
 
 
375 aa  465  9.999999999999999e-131  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_04073  filamentation induced by cAMP protein Fic  59.78 
 
 
363 aa  448  1e-125  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03956  Fic protein family  63.44 
 
 
342 aa  439  9.999999999999999e-123  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4148  filamentation induced by cAMP protein Fic  56.02 
 
 
359 aa  422  1e-117  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0565  filamentation induced by cAMP protein Fic  55.43 
 
 
358 aa  413  1e-114  Serratia proteamaculans 568  Bacteria  hitchhiker  0.0018431  normal 
 
 
-
 
NC_013530  Xcel_0777  filamentation induced by cAMP protein Fic  50 
 
 
356 aa  302  6.000000000000001e-81  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.4104  n/a   
 
 
-
 
NC_013730  Slin_2152  filamentation induced by cAMP protein Fic  42.58 
 
 
374 aa  278  8e-74  Spirosoma linguale DSM 74  Bacteria  normal  0.164511  normal  0.297035 
 
 
-
 
NC_007955  Mbur_1221  filamentation induced by cAMP protein Fic  42.7 
 
 
358 aa  275  1.0000000000000001e-72  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007954  Sden_0294  filamentation induced by cAMP protein Fic  42.44 
 
 
359 aa  270  2.9999999999999997e-71  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_4037  filamentation induced by cAMP protein Fic  42.82 
 
 
360 aa  269  5.9999999999999995e-71  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0216  hypothetical protein  39.03 
 
 
373 aa  263  4.999999999999999e-69  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2528  filamentation induced by cAMP protein Fic  41.41 
 
 
357 aa  260  2e-68  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_2299  filamentation induced by cAMP protein Fic  39.61 
 
 
361 aa  253  3e-66  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_009714  CHAB381_1403  MloA  38.86 
 
 
359 aa  247  2e-64  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.10524  n/a   
 
 
-
 
NC_009707  JJD26997_1912  putative MloA protein  39.6 
 
 
356 aa  245  9e-64  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_4575  filamentation induced by cAMP protein Fic  39.89 
 
 
377 aa  241  1e-62  Spirosoma linguale DSM 74  Bacteria  normal  0.76172  normal 
 
 
-
 
NC_013061  Phep_3599  filamentation induced by cAMP protein Fic  37.06 
 
 
373 aa  240  2.9999999999999997e-62  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_003912  CJE1723  MloA protein, putative  38.97 
 
 
356 aa  239  5.999999999999999e-62  Campylobacter jejuni RM1221  Bacteria  normal  0.325605  n/a   
 
 
-
 
NC_007954  Sden_0297  hypothetical protein  56.42 
 
 
200 aa  224  2e-57  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2123  hypothetical protein  31.01 
 
 
368 aa  152  1e-35  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0190  filamentation induced by cAMP protein Fic  33.82 
 
 
384 aa  149  7e-35  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3955  filamentation induced by cAMP protein Fic  31.11 
 
 
384 aa  148  2.0000000000000003e-34  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_1471  filamentation induced by cAMP protein Fic  29.12 
 
 
369 aa  142  9.999999999999999e-33  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_008687  Pden_3305  filamentation induced by cAMP protein Fic  31.79 
 
 
393 aa  140  3e-32  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.735842 
 
 
-
 
NC_007794  Saro_0373  filamentation induced by cAMP protein Fic  29.67 
 
 
371 aa  138  2e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.5223  n/a   
 
 
-
 
NC_010002  Daci_1077  filamentation induced by cAMP protein Fic  31.23 
 
 
393 aa  136  6.0000000000000005e-31  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.750525 
 
 
-
 
NC_009667  Oant_0617  filamentation induced by cAMP protein Fic  31.88 
 
 
393 aa  136  6.0000000000000005e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0094  filamentation induced by cAMP protein Fic  32.36 
 
 
387 aa  133  3.9999999999999996e-30  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_2264  filamentation induced by cAMP protein Fic  27.22 
 
 
384 aa  133  3.9999999999999996e-30  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1541  filamentation induced by cAMP protein Fic  33.33 
 
 
364 aa  130  5.0000000000000004e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU0168  Fic family protein  28.75 
 
 
388 aa  129  6e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0315  filamentation induced by cAMP protein Fic  30.81 
 
 
398 aa  128  1.0000000000000001e-28  Polaromonas sp. JS666  Bacteria  normal  0.300424  normal 
 
 
-
 
NC_011761  AFE_0092  fic family protein  31.87 
 
 
358 aa  128  2.0000000000000002e-28  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_1499  filamentation induced by cAMP protein Fic  27.78 
 
 
374 aa  127  3e-28  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0300  filamentation induced by cAMP protein Fic  33.53 
 
 
398 aa  127  3e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.372367  normal 
 
 
-
 
NC_008554  Sfum_2057  filamentation induced by cAMP protein Fic  30.86 
 
 
377 aa  125  8.000000000000001e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.280737  normal 
 
 
-
 
NC_009523  RoseRS_0276  filamentation induced by cAMP protein Fic  28.94 
 
 
387 aa  125  1e-27  Roseiflexus sp. RS-1  Bacteria  normal  0.475066  unclonable  0.0000132219 
 
 
-
 
NC_010571  Oter_0995  filamentation induced by cAMP protein Fic  28.09 
 
 
386 aa  125  2e-27  Opitutus terrae PB90-1  Bacteria  normal  0.0390266  hitchhiker  0.00286673 
 
 
-
 
NC_007796  Mhun_1731  filamentation induced by cAMP protein Fic  27.04 
 
 
380 aa  124  2e-27  Methanospirillum hungatei JF-1  Archaea  normal  0.142592  normal 
 
 
-
 
NC_007514  Cag_2003  fic family protein  28.53 
 
 
377 aa  123  4e-27  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.0278833  n/a   
 
 
-
 
NC_011883  Ddes_2358  filamentation induced by cAMP protein Fic  28.18 
 
 
371 aa  123  6e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013924  Nmag_4188  filamentation induced by cAMP protein Fic  26.4 
 
 
381 aa  120  4.9999999999999996e-26  Natrialba magadii ATCC 43099  Archaea  normal  0.635354  n/a   
 
 
-
 
NC_011830  Dhaf_4488  filamentation induced by cAMP protein Fic  27.56 
 
 
380 aa  119  7.999999999999999e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0835  fic family protein  29.62 
 
 
386 aa  117  3e-25  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0509  filamentation induced by cAMP protein Fic  29.28 
 
 
387 aa  116  7.999999999999999e-25  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3268  filamentation induced by cAMP protein Fic  29.67 
 
 
381 aa  115  1.0000000000000001e-24  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.592904  normal 
 
 
-
 
NC_002967  TDE0233  fic family protein  26.29 
 
 
377 aa  113  6e-24  Treponema denticola ATCC 35405  Bacteria  normal  0.638848  n/a   
 
 
-
 
NC_004116  SAG2119  hypothetical protein  26.96 
 
 
373 aa  112  7.000000000000001e-24  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0010  hypothetical protein  30 
 
 
383 aa  112  9e-24  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_2249  filamentation induced by cAMP protein Fic  28.57 
 
 
389 aa  112  1.0000000000000001e-23  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2109  filamentation induced by cAMP protein Fic  26.61 
 
 
391 aa  110  4.0000000000000004e-23  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_2006  filamentation induced by cAMP protein Fic  28.65 
 
 
401 aa  108  1e-22  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.0414865 
 
 
-
 
NC_013739  Cwoe_1010  filamentation induced by cAMP protein Fic  29.94 
 
 
401 aa  106  8e-22  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3924  filamentation induced by cAMP protein Fic  31.73 
 
 
391 aa  105  1e-21  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0625  filamentation induced by cAMP protein Fic  27.4 
 
 
392 aa  105  1e-21  Methanococcus maripaludis C5  Archaea  normal  0.849792  n/a   
 
 
-
 
NC_013093  Amir_1101  filamentation induced by cAMP protein Fic  31.13 
 
 
438 aa  103  4e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0415  filamentation induced by cAMP protein Fic  28.74 
 
 
390 aa  102  9e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_1900  filamentation induced by cAMP protein Fic  27.71 
 
 
394 aa  102  1e-20  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_013158  Huta_2627  filamentation induced by cAMP protein Fic  27.53 
 
 
384 aa  101  2e-20  Halorhabdus utahensis DSM 12940  Archaea  normal  0.828217  n/a   
 
 
-
 
NC_007519  Dde_0970  fic family protein  28.9 
 
 
389 aa  101  2e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.987747  n/a   
 
 
-
 
NC_007777  Francci3_0673  filamentation induced by cAMP protein Fic  27.08 
 
 
398 aa  101  2e-20  Frankia sp. CcI3  Bacteria  normal  0.974543  normal  0.0892383 
 
 
-
 
NC_009338  Mflv_0293  filamentation induced by cAMP protein Fic  25.98 
 
 
394 aa  101  2e-20  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.970284  decreased coverage  0.0093527 
 
 
-
 
NC_009975  MmarC6_0037  filamentation induced by cAMP protein Fic  26.32 
 
 
392 aa  99.4  9e-20  Methanococcus maripaludis C6  Archaea  normal  0.450631  n/a   
 
 
-
 
NC_013744  Htur_3972  filamentation induced by cAMP protein Fic  26.32 
 
 
385 aa  97.1  4e-19  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_013223  Dret_1880  filamentation induced by cAMP protein Fic  28.13 
 
 
389 aa  96.3  9e-19  Desulfohalobium retbaense DSM 5692  Bacteria  hitchhiker  0.000804249  decreased coverage  0.000268134 
 
 
-
 
NC_010505  Mrad2831_2527  filamentation induced by cAMP protein Fic  27.47 
 
 
412 aa  95.1  2e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2374  filamentation induced by cAMP protein Fic  27.01 
 
 
392 aa  89.7  7e-17  Conexibacter woesei DSM 14684  Bacteria  normal  0.0692926  normal  0.0752567 
 
 
-
 
NC_012918  GM21_2726  filamentation induced by cAMP protein Fic  31.75 
 
 
395 aa  88.2  2e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011059  Paes_2305  filamentation induced by cAMP protein Fic  32.17 
 
 
141 aa  79  0.0000000000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.900404 
 
 
-
 
NC_009727  CBUD_2174  Fic family protein  29.15 
 
 
348 aa  77.8  0.0000000000003  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2207  hypothetical protein  29.15 
 
 
348 aa  77.4  0.0000000000003  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.00000284697  n/a   
 
 
-
 
NC_008554  Sfum_3863  filamentation induced by cAMP protein Fic  28.22 
 
 
334 aa  73.6  0.000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0343511 
 
 
-
 
NC_013739  Cwoe_5696  filamentation induced by cAMP protein Fic  28.85 
 
 
358 aa  72.8  0.000000000008  Conexibacter woesei DSM 14684  Bacteria  decreased coverage  0.00196433  normal 
 
 
-
 
NC_008463  PA14_28800  hypothetical protein  30.94 
 
 
331 aa  71.2  0.00000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000000000287413  decreased coverage  0.000000000406133 
 
 
-
 
NC_013174  Jden_0044  filamentation induced by cAMP protein Fic  30.99 
 
 
419 aa  71.2  0.00000000003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.203132 
 
 
-
 
NC_009943  Dole_0416  filamentation induced by cAMP protein Fic  29.65 
 
 
336 aa  70.5  0.00000000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1798  filamentation induced by cAMP protein Fic  32.81 
 
 
427 aa  70.1  0.00000000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  hitchhiker  0.000000635308  n/a   
 
 
-
 
NC_009675  Anae109_0607  filamentation induced by cAMP protein Fic  30.14 
 
 
412 aa  68.6  0.0000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_0601  filamentation induced by cAMP protein Fic  31.71 
 
 
408 aa  68.2  0.0000000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4167  filamentation induced by cAMP protein Fic  31.41 
 
 
351 aa  68.6  0.0000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.120401  normal 
 
 
-
 
NC_008347  Mmar10_2315  filamentation induced by cAMP protein Fic  30.41 
 
 
376 aa  67.8  0.0000000003  Maricaulis maris MCS10  Bacteria  normal  0.655269  normal 
 
 
-
 
NC_012803  Mlut_22980  hypothetical protein  30 
 
 
406 aa  67.4  0.0000000004  Micrococcus luteus NCTC 2665  Bacteria  normal  0.249401  n/a   
 
 
-
 
NC_007519  Dde_2494  hypothetical protein  32.08 
 
 
342 aa  67  0.0000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE2641  Fic family protein  26.87 
 
 
328 aa  65.5  0.000000001  Treponema denticola ATCC 35405  Bacteria  unclonable  0.000000103829  n/a   
 
 
-
 
NC_013530  Xcel_3251  filamentation induced by cAMP protein Fic  32.84 
 
 
393 aa  65.9  0.000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0798212  n/a   
 
 
-
 
NC_013169  Ksed_22590  hypothetical protein  41.94 
 
 
429 aa  65.9  0.000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2669  Fic family protein  34.65 
 
 
330 aa  66.2  0.000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0903  filamentation induced by cAMP protein Fic  24.01 
 
 
347 aa  64.7  0.000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.000226959 
 
 
-
 
NC_011891  A2cp1_0593  filamentation induced by cAMP protein Fic  26.58 
 
 
412 aa  65.1  0.000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1972  filamentation induced by cAMP protein Fic  29.32 
 
 
349 aa  64.7  0.000000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.335925  n/a   
 
 
-
 
NC_007955  Mbur_1532  filamentation induced by cAMP protein Fic  26.7 
 
 
438 aa  63.9  0.000000004  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_014151  Cfla_0154  filamentation induced by cAMP protein Fic  38.14 
 
 
393 aa  63.5  0.000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0242065 
 
 
-
 
NC_008345  Sfri_1955  filamentation induced by cAMP protein Fic  37.25 
 
 
333 aa  63.2  0.000000006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.484154  n/a   
 
 
-
 
NC_011663  Sbal223_3472  filamentation induced by cAMP protein Fic  37.25 
 
 
333 aa  63.2  0.000000007  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2194  filamentation induced by cAMP protein Fic  36.84 
 
 
400 aa  63.2  0.000000008  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0152  Fic family protein  23.6 
 
 
416 aa  62.8  0.000000009  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.19734 
 
 
-
 
NC_013595  Sros_3247  hypothetical protein  32.69 
 
 
377 aa  62.8  0.00000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.199811  normal  0.982755 
 
 
-
 
NC_008528  OEOE_1450  Fic family protein  32.17 
 
 
410 aa  62.8  0.00000001  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
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