13 homologs were found in PanDaTox collection
for query gene Tgr7_0023 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011901  Tgr7_0023  hypothetical protein  100 
 
 
137 aa  269  8.000000000000001e-72  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.0996823  n/a   
 
 
-
 
NC_013889  TK90_0540  hypothetical protein  44.57 
 
 
175 aa  124  6e-28  Thioalkalivibrio sp. K90mix  Bacteria  decreased coverage  0.00507326  normal 
 
 
-
 
NC_008340  Mlg_1375  hypothetical protein  40 
 
 
168 aa  80.9  0.000000000000006  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.48826  normal 
 
 
-
 
NC_007963  Csal_1035  hypothetical protein  42.2 
 
 
132 aa  80.1  0.000000000000009  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_2099  hypothetical protein  38.68 
 
 
139 aa  76.6  0.0000000000001  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1398  hypothetical protein  42.68 
 
 
158 aa  73.2  0.000000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0016  hypothetical protein  33.1 
 
 
164 aa  72.8  0.000000000001  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2828  hypothetical protein  30.4 
 
 
129 aa  70.9  0.000000000006  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2332  hypothetical protein  36.03 
 
 
148 aa  67.4  0.00000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00672726  normal 
 
 
-
 
NC_009620  Smed_4416  hypothetical protein  38.1 
 
 
147 aa  63.9  0.0000000007  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.740709 
 
 
-
 
NC_012850  Rleg_2637  hypothetical protein  29.81 
 
 
163 aa  57.4  0.00000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.813016  normal 
 
 
-
 
NC_013889  TK90_1404  hypothetical protein  30.77 
 
 
131 aa  51.6  0.000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_3164  hypothetical protein  31.33 
 
 
135 aa  43.9  0.0007  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.147575  normal  0.188251 
 
 
-
 
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