More than 300 homologs were found in PanDaTox collection
for query gene Tfu_2737 on replicon NC_007333
Organism: Thermobifida fusca YX



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007333  Tfu_2737  transcriptional regulatory protein  100 
 
 		 253 aa  508  1e-143  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  84.26 
 
 		 255 aa  401  1e-111  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  78.7 
 
 		 237 aa  351  5e-96  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  67.84 
 
 		 251 aa  337  9.999999999999999e-92  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  70.17 
 
 		 237 aa  333  1e-90  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  72.6 
 
 		 264 aa  309  2.9999999999999997e-83  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  69.14 
 
 		 261 aa  309  2.9999999999999997e-83  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  67.81 
 
 		 250 aa  300  1e-80  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  68.4 
 
 		 247 aa  300  1e-80  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.186762 
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  68.83 
 
 		 259 aa  297  1e-79  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  65.64 
 
 		 249 aa  285  5e-76  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal  1 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  66.08 
 
 		 243 aa  280  1e-74  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  59.76 
 
 		 248 aa  280  2e-74  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.190602 
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  60.49 
 
 		 257 aa  278  7e-74  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  61.84 
 
 		 232 aa  277  1e-73  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  62.28 
 
 		 232 aa  277  1e-73  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  59.92 
 
 		 250 aa  277  1e-73  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  63.44 
 
 		 241 aa  274  1.0000000000000001e-72  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.0000121276 
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  63.56 
 
 		 257 aa  273  2.0000000000000002e-72  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  63.56 
 
 		 257 aa  273  2.0000000000000002e-72  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  63.56 
 
 		 257 aa  273  2.0000000000000002e-72  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  59.92 
 
 		 240 aa  271  1e-71  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  62.67 
 
 		 267 aa  271  1e-71  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  62.28 
 
 		 239 aa  270  1e-71  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  63.3 
 
 		 278 aa  269  4e-71  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal  1 
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  60.53 
 
 		 239 aa  268  5e-71  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0279779 
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  64.49 
 
 		 255 aa  268  8.999999999999999e-71  Mycobacterium tuberculosis F11  Bacteria  normal  1  hitchhiker  0.00597919 
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  59.91 
 
 		 249 aa  263  2e-69  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  62.82 
 
 		 243 aa  263  2e-69  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  61.4 
 
 		 256 aa  260  2e-68  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.0528352 
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  59.57 
 
 		 232 aa  260  2e-68  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  59.83 
 
 		 270 aa  253  3e-66  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  57.64 
 
 		 236 aa  253  3e-66  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  52.52 
 
 		 266 aa  246  2e-64  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  46.13 
 
 		 296 aa  228  7e-59  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_013169  Ksed_03550  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  48.29 
 
 		 261 aa  167  1e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.329191  normal  1 
 
 
-
 
NC_009565  TBFG_12898  transcriptional regulator  46.22 
 
 		 252 aa  149  6e-35  Mycobacterium tuberculosis F11  Bacteria  normal  0.385025  normal  1 
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  47.46 
 
 		 258 aa  142  7e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_19870  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  43.82 
 
 		 224 aa  137  2e-31  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.931606  normal  1 
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  54.03 
 
 		 217 aa  134  9.999999999999999e-31  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1126  transcriptional regulator  50.81 
 
 		 223 aa  129  5.0000000000000004e-29  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.0000289398  n/a   
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  48.44 
 
 		 236 aa  129  7.000000000000001e-29  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_013552  DhcVS_944  transcriptional regulator  53.6 
 
 		 223 aa  127  1.0000000000000001e-28  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  42.86 
 
 		 238 aa  127  2.0000000000000002e-28  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_009455  DehaBAV1_0955  two component transcriptional regulator  50.4 
 
 		 223 aa  122  4e-27  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  46.34 
 
 		 224 aa  120  1.9999999999999998e-26  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  39.67 
 
 		 231 aa  115  6e-25  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  35.91 
 
 		 223 aa  115  6e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  35.91 
 
 		 223 aa  114  1.0000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  35.36 
 
 		 223 aa  114  1.0000000000000001e-24  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  35.91 
 
 		 223 aa  114  1.0000000000000001e-24  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  35.36 
 
 		 223 aa  114  1.0000000000000001e-24  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  36.22 
 
 		 226 aa  114  1.0000000000000001e-24  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  35.91 
 
 		 223 aa  114  1.0000000000000001e-24  Bacillus cereus G9842  Bacteria  normal  1  normal  0.910988 
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  44.88 
 
 		 233 aa  114  1.0000000000000001e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  hitchhiker  0.00991602 
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  35.91 
 
 		 223 aa  114  1.0000000000000001e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  35.91 
 
 		 223 aa  115  1.0000000000000001e-24  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  35.91 
 
 		 223 aa  114  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_005957  BT9727_1191  response regulator  35.36 
 
 		 223 aa  114  2.0000000000000002e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  35.91 
 
 		 223 aa  114  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013203  Apar_0432  putative two component transcriptional regulator, winged helix family  44 
 
 		 224 aa  113  3e-24  Atopobium parvulum DSM 20469  Bacteria  hitchhiker  0.000490664  normal  1 
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  37.27 
 
 		 228 aa  112  4.0000000000000004e-24  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  37.7 
 
 		 232 aa  111  1.0000000000000001e-23  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_3871  two component transcriptional regulator, winged helix family  40.11 
 
 		 227 aa  109  4.0000000000000004e-23  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000000473157  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  36.42 
 
 		 228 aa  109  4.0000000000000004e-23  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  33.9 
 
 		 223 aa  108  6e-23  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  39.18 
 
 		 235 aa  108  7.000000000000001e-23  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  36.76 
 
 		 229 aa  108  1e-22  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  33.93 
 
 		 236 aa  106  4e-22  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  47.76 
 
 		 231 aa  106  4e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal  1 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  38.97 
 
 		 239 aa  105  5e-22  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_011830  Dhaf_1756  two component transcriptional regulator, winged helix family  35.39 
 
 		 230 aa  105  6e-22  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.769657  n/a   
 
 
-
 
NC_007413  Ava_1922  two component transcriptional regulator  38.51 
 
 		 228 aa  105  7e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  38.12 
 
 		 236 aa  105  8e-22  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  36.88 
 
 		 227 aa  105  8e-22  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  35.94 
 
 		 237 aa  105  9e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007604  Synpcc7942_2305  two component transcriptional regulator  37.5 
 
 		 228 aa  104  1e-21  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.79647 
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  38.04 
 
 		 239 aa  104  1e-21  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  33.2 
 
 		 239 aa  104  1e-21  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  35.16 
 
 		 232 aa  104  1e-21  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  33.2 
 
 		 239 aa  104  1e-21  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_011729  PCC7424_2242  two component transcriptional regulator, winged helix family  31.7 
 
 		 224 aa  103  2e-21  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.415885 
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  44.07 
 
 		 239 aa  103  2e-21  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  32.96 
 
 		 230 aa  103  2e-21  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  34.57 
 
 		 236 aa  102  4e-21  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal  1 
 
 
-
 
NC_011898  Ccel_1658  two component transcriptional regulator, winged helix family  41.41 
 
 		 230 aa  103  4e-21  Clostridium cellulolyticum H10  Bacteria  normal  0.515101  n/a   
 
 
-
 
NC_011830  Dhaf_4050  two component transcriptional regulator, winged helix family  40 
 
 		 227 aa  102  5e-21  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00552008  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  47.2 
 
 		 235 aa  102  5e-21  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  35.48 
 
 		 240 aa  102  6e-21  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal  1 
 
 
-
 
NC_008530  LGAS_0064  DNA-binding response regulator  40.12 
 
 		 235 aa  102  6e-21  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.611294  normal  1 
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  32.91 
 
 		 235 aa  102  6e-21  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_010501  PputW619_0154  two component transcriptional regulator  34.05 
 
 		 229 aa  101  9e-21  Pseudomonas putida W619  Bacteria  normal  1  normal  0.596099 
 
 
-
 
NC_012560  Avin_48520  phosphate regulon response regulator; PhoB  35.29 
 
 		 229 aa  101  9e-21  Azotobacter vinelandii DJ  Bacteria  normal  0.0667889  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  47.2 
 
 		 235 aa  101  1e-20  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_004578  PSPTO_5477  phosphate regulon transcriptional regulatory protein PhoB  34.05 
 
 		 229 aa  101  1e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  34.52 
 
 		 235 aa  101  1e-20  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_013216  Dtox_3085  two component transcriptional regulator, winged helix family  38.1 
 
 		 232 aa  101  1e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.00000000315463  hitchhiker  0.000599707 
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  34.52 
 
 		 235 aa  101  1e-20  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_012793  GWCH70_1924  two component transcriptional regulator, winged helix family  35.14 
 
 		 225 aa  101  1e-20  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_4408  two component transcriptional regulator  35.03 
 
 		 229 aa  101  1e-20  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.0897949 
 
 
-
 
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