10 homologs were found in PanDaTox collection
for query gene Tery_3647 on replicon NC_008312
Organism: Trichodesmium erythraeum IMS101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008312  Tery_3647  CpcD phycobilisome linker-like  100 
 
 
67 aa  140  6e-33  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.303319 
 
 
-
 
NC_011729  PCC7424_2636  CpcD phycobilisome linker domain protein  94.03 
 
 
67 aa  133  7e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.702541 
 
 
-
 
NC_011726  PCC8801_2788  CpcD phycobilisome linker domain protein  92.54 
 
 
67 aa  132  1e-30  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3313  CpcD phycobilisome linker domain protein  92.54 
 
 
67 aa  132  1e-30  Cyanothece sp. PCC 8802  Bacteria  normal  0.120836  normal  0.473644 
 
 
-
 
NC_011884  Cyan7425_4996  CpcD phycobilisome linker domain protein  89.55 
 
 
67 aa  129  9e-30  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2434  CpcD phycobilisome linker domain-containing protein  84.85 
 
 
68 aa  124  4e-28  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0325  LC 7.8 apoprotein (core components of the phycobilisomes)  77.61 
 
 
67 aa  116  9e-26  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2623  CpcD phycobilisome linker-like  81.54 
 
 
68 aa  115  3e-25  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  6.6809e-13  normal 
 
 
-
 
NC_007516  Syncc9605_2199  linker polypeptide, allophycocyanin-associated  69.23 
 
 
66 aa  103  8e-22  Synechococcus sp. CC9605  Bacteria  normal  0.545624  normal 
 
 
-
 
NC_007513  Syncc9902_0477  linker polypeptide, allophycocyanin-associated  66.15 
 
 
66 aa  100  8e-21  Synechococcus sp. CC9902  Bacteria  normal  0.655742  n/a   
 
 
-
 
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