More than 300 homologs were found in PanDaTox collection
for query gene Tcr_0027 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007520  Tcr_0027  methyl-accepting chemotaxis sensory transducer  100 
 
 
959 aa  1969    Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.37 
 
 
1170 aa  420  1e-116  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0077  methyl-accepting chemotaxis sensory transducer  31.56 
 
 
941 aa  370  1e-101  Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.000232315  n/a   
 
 
-
 
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.7 
 
 
954 aa  286  1.0000000000000001e-75  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0574  methyl-accepting chemotaxis sensory transducer  33.86 
 
 
815 aa  283  9e-75  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0777  methyl-accepting chemotaxis sensory transducer  34.48 
 
 
712 aa  274  7e-72  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0361  methyl-accepting chemotaxis sensory transducer  30.24 
 
 
601 aa  243  1e-62  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  31.77 
 
 
843 aa  230  8e-59  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  31.99 
 
 
740 aa  226  1e-57  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  32.87 
 
 
745 aa  226  1e-57  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  33.18 
 
 
706 aa  222  3e-56  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  30.93 
 
 
755 aa  222  3e-56  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  42.71 
 
 
547 aa  221  5e-56  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  39.66 
 
 
860 aa  221  5e-56  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  42.71 
 
 
547 aa  221  5e-56  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  42.71 
 
 
547 aa  221  6e-56  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  42.71 
 
 
547 aa  221  7e-56  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.03 
 
 
888 aa  220  8.999999999999998e-56  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  37.39 
 
 
678 aa  219  2e-55  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3335  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
547 aa  218  2.9999999999999998e-55  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.499063 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  30.36 
 
 
733 aa  218  4e-55  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  36.96 
 
 
767 aa  218  4e-55  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  30.68 
 
 
753 aa  216  9.999999999999999e-55  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  38.14 
 
 
610 aa  216  1.9999999999999998e-54  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.57 
 
 
1123 aa  215  3.9999999999999995e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_4355  methyl-accepting chemotaxis sensory transducer  41.03 
 
 
540 aa  213  1e-53  Pectobacterium wasabiae WPP163  Bacteria  normal  0.31766  n/a   
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
572 aa  213  2e-53  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  39.72 
 
 
719 aa  212  2e-53  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_4072  methyl-accepting chemotaxis sensory transducer  41.03 
 
 
540 aa  211  4e-53  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
559 aa  211  4e-53  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  43.11 
 
 
579 aa  211  4e-53  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  40.83 
 
 
547 aa  211  4e-53  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  40.83 
 
 
547 aa  211  6e-53  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  43.11 
 
 
581 aa  211  6e-53  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  40.83 
 
 
547 aa  210  1e-52  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  40.48 
 
 
547 aa  210  1e-52  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  39.68 
 
 
679 aa  210  1e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  40.14 
 
 
547 aa  209  2e-52  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  38.28 
 
 
542 aa  209  2e-52  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  40.83 
 
 
543 aa  208  3e-52  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
555 aa  209  3e-52  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  38 
 
 
863 aa  208  3e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  32.5 
 
 
705 aa  209  3e-52  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  40.83 
 
 
553 aa  209  3e-52  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5166  methyl-accepting chemotaxis sensory transducer  34.43 
 
 
669 aa  208  5e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  38.33 
 
 
945 aa  207  5e-52  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  41.89 
 
 
569 aa  207  5e-52  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_2238  methyl-accepting chemotaxis sensory transducer  39.93 
 
 
546 aa  207  7e-52  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1503  methyl-accepting chemotaxis protein III  39.93 
 
 
546 aa  207  8e-52  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.07 
 
 
864 aa  207  8e-52  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  28.73 
 
 
752 aa  207  9e-52  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  39.79 
 
 
561 aa  207  1e-51  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  38.71 
 
 
679 aa  207  1e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.12 
 
 
665 aa  206  2e-51  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_010498  EcSMS35_1753  methyl-accepting chemotaxis protein III  39.59 
 
 
546 aa  206  2e-51  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  2.79367e-17 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  39.12 
 
 
664 aa  206  2e-51  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2022  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.42 
 
 
748 aa  206  2e-51  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  39.04 
 
 
661 aa  206  2e-51  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  37.87 
 
 
651 aa  206  2e-51  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  39.59 
 
 
546 aa  205  3e-51  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  39.59 
 
 
546 aa  205  3e-51  Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_012892  B21_01390  hypothetical protein  39.59 
 
 
546 aa  205  3e-51  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  39.59 
 
 
546 aa  206  3e-51  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  39.12 
 
 
664 aa  205  3e-51  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  39.86 
 
 
552 aa  205  4e-51  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_012850  Rleg_3005  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
665 aa  204  5e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_2004  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.26 
 
 
591 aa  204  7e-51  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  0.0000000000169064  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  38.37 
 
 
792 aa  204  8e-51  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  36.82 
 
 
583 aa  204  8e-51  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  39.58 
 
 
545 aa  204  8e-51  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  38.82 
 
 
657 aa  204  8e-51  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3714  methyl-accepting chemotaxis protein  36.66 
 
 
679 aa  204  9e-51  Agrobacterium vitis S4  Bacteria  normal  0.0885803  n/a   
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  39.59 
 
 
470 aa  204  9e-51  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_010515  Bcenmc03_3785  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
620 aa  203  9.999999999999999e-51  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0060774  normal  0.0147123 
 
 
-
 
NC_009831  Ssed_1002  methyl-accepting chemotaxis protein-like protein  30.4 
 
 
1100 aa  203  9.999999999999999e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_27970  chemotaxis sensory transducer  40.28 
 
 
575 aa  203  9.999999999999999e-51  Azotobacter vinelandii DJ  Bacteria  normal  0.0997024  n/a   
 
 
-
 
NC_008391  Bamb_5471  methyl-accepting chemotaxis sensory transducer  39.3 
 
 
620 aa  203  9.999999999999999e-51  Burkholderia ambifaria AMMD  Bacteria  normal  0.407039  normal 
 
 
-
 
NC_012917  PC1_0380  methyl-accepting chemotaxis sensory transducer  40.41 
 
 
539 aa  203  9.999999999999999e-51  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3723  methyl-accepting chemotaxis sensory transducer  40.41 
 
 
539 aa  203  9.999999999999999e-51  Dickeya zeae Ech1591  Bacteria  normal  0.359916  n/a   
 
 
-
 
NC_009636  Smed_0082  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
665 aa  202  1.9999999999999998e-50  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_0463  methyl-accepting chemotaxis sensory transducer  38.94 
 
 
517 aa  202  1.9999999999999998e-50  Serratia proteamaculans 568  Bacteria  hitchhiker  0.000944533  normal  0.933191 
 
 
-
 
NC_013421  Pecwa_0431  methyl-accepting chemotaxis sensory transducer  40.41 
 
 
539 aa  202  1.9999999999999998e-50  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3618  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
620 aa  202  1.9999999999999998e-50  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0344374  normal 
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.1 
 
 
701 aa  202  1.9999999999999998e-50  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  38.48 
 
 
656 aa  203  1.9999999999999998e-50  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  38.48 
 
 
656 aa  202  1.9999999999999998e-50  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  38.48 
 
 
657 aa  202  1.9999999999999998e-50  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  39.61 
 
 
628 aa  202  1.9999999999999998e-50  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  38.82 
 
 
654 aa  202  3e-50  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  36.18 
 
 
775 aa  202  3e-50  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_010086  Bmul_4997  methyl-accepting chemotaxis sensory transducer  39.3 
 
 
620 aa  202  3e-50  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.245568 
 
 
-
 
NC_007963  Csal_1989  methyl-accepting chemotaxis sensory transducer  39.22 
 
 
556 aa  202  3e-50  Chromohalobacter salexigens DSM 3043  Bacteria  decreased coverage  0.00286784  n/a   
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  39.31 
 
 
544 aa  202  3e-50  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_008061  Bcen_4628  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
620 aa  202  3e-50  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3736  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
620 aa  202  3e-50  Burkholderia cenocepacia HI2424  Bacteria  normal  0.455432  normal  0.0212994 
 
 
-
 
NC_012917  PC1_1669  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
560 aa  202  3e-50  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  37.46 
 
 
567 aa  202  3.9999999999999996e-50  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3560  methyl-accepting chemotaxis sensory transducer  40.07 
 
 
538 aa  201  3.9999999999999996e-50  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0826  methyl-accepting chemotaxis sensory transducer  37.27 
 
 
529 aa  201  3.9999999999999996e-50  Dickeya dadantii Ech703  Bacteria  normal  0.227259  n/a   
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  36.56 
 
 
525 aa  202  3.9999999999999996e-50  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
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