6 homologs were found in PanDaTox collection
for query gene TM1040_3838 on replicon NC_008042
Organism: Ruegeria sp. TM1040



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008042  TM1040_3838  hypothetical protein  100 
 
 
65 aa  129  9e-30  Ruegeria sp. TM1040  Bacteria  normal  0.552938  normal  0.0614797 
 
 
-
 
NC_008042  TM1040_3853  hypothetical protein  48.33 
 
 
63 aa  57  9e-08  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0377  hypothetical protein  48.39 
 
 
70 aa  52.8  1e-06  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00362783  n/a   
 
 
-
 
NC_007641  Rru_B0036  hypothetical protein  44.26 
 
 
388 aa  52.8  2e-06  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_20981  hypothetical protein  38.98 
 
 
63 aa  45.1  0.0003  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.416247 
 
 
-
 
NC_007335  PMN2A_2181  hypothetical protein  44.23 
 
 
60 aa  44.3  0.0006  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.119525  n/a   
 
 
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