More than 300 homologs were found in PanDaTox collection
for query gene TM1040_2227 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007802  Jann_2564  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  53.99 
 
 
1089 aa  884    Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0460  MCP methyltransferase, CheR-type  56.33 
 
 
837 aa  903    Ruegeria sp. TM1040  Bacteria  normal  0.604812  normal 
 
 
-
 
NC_008044  TM1040_2227  MCP methyltransferase, CheR-type  100 
 
 
824 aa  1697    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_0327  putative PAS/PAC sensor protein  35.68 
 
 
1008 aa  430  1e-119  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_011060  Ppha_0229  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  36.29 
 
 
1138 aa  431  1e-119  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0314  Signal transduction histidine kinase (STHK) with CheB and CheR activity  35.73 
 
 
1399 aa  430  1e-119  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A2183  hypothetical protein  35.46 
 
 
980 aa  425  1e-117  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.850093 
 
 
-
 
NC_008639  Cpha266_1788  putative PAS/PAC sensor protein  36.47 
 
 
998 aa  426  1e-117  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0563  putative PAS/PAC sensor protein  36.4 
 
 
1035 aa  420  1e-116  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2376  signal transduction histidine kinase with CheB and CheR activity  34.49 
 
 
1407 aa  419  9.999999999999999e-116  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2549  fused CheR-type MCP methyltransferase and PAS sensor protein  36.08 
 
 
1006 aa  414  1e-114  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0780  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  34.88 
 
 
887 aa  410  1e-113  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0673  signal transduction histidine kinase with CheB and CheR activity  33.46 
 
 
1215 aa  406  1.0000000000000001e-112  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1410  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  33.07 
 
 
1120 aa  407  1.0000000000000001e-112  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.132886  n/a   
 
 
-
 
NC_007955  Mbur_0399  MCP methyltransferase, CheR-type  31.93 
 
 
820 aa  409  1.0000000000000001e-112  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_011060  Ppha_1653  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  34.94 
 
 
993 aa  403  1e-111  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2045  CheB methylesterase:MCP methyltransferase, CheR-type  34.51 
 
 
868 aa  401  9.999999999999999e-111  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2162  MCP methyltransferase/methylesterase, CheR/CheB  33.9 
 
 
879 aa  399  1e-109  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_2460  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  34.62 
 
 
971 aa  398  1e-109  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_010803  Clim_1600  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  35.87 
 
 
1000 aa  396  1e-109  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3165  signal transduction histidine kinase with CheB and CheR activity  35.28 
 
 
1306 aa  398  1e-109  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3046  hypothetical protein  33.45 
 
 
1010 aa  395  1e-108  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00164382 
 
 
-
 
NC_008709  Ping_1840  MCP methyltransferase, CheR-type  31.65 
 
 
840 aa  395  1e-108  Psychromonas ingrahamii 37  Bacteria  normal  0.59391  normal  0.603716 
 
 
-
 
NC_008709  Ping_3128  MCP methyltransferase, CheR-type  32.56 
 
 
840 aa  394  1e-108  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4278  putative PAS/PAC sensor protein  33 
 
 
1027 aa  391  1e-107  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1703  signal transduction histidine kinase with CheB and CheR activity  33 
 
 
1408 aa  392  1e-107  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.433463  normal 
 
 
-
 
NC_013061  Phep_3913  PAS sensor protein  33.05 
 
 
1337 aa  388  1e-106  Pedobacter heparinus DSM 2366  Bacteria  normal  0.290527  normal  0.28306 
 
 
-
 
NC_010625  Bphy_6399  signal transduction histidine kinase with CheB and CheR activity  34.67 
 
 
1361 aa  386  1e-105  Burkholderia phymatum STM815  Bacteria  normal  0.191888  normal 
 
 
-
 
NC_013132  Cpin_7206  signal transduction histidine kinase with CheB and CheR activity  33.33 
 
 
1499 aa  384  1e-105  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2229  methylesterase CheB/methylase CheR  35.84 
 
 
1170 aa  383  1e-105  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.840236  n/a   
 
 
-
 
NC_013440  Hoch_3250  signal transduction histidine kinase with CheB and CheR activity  34.05 
 
 
1348 aa  385  1e-105  Haliangium ochraceum DSM 14365  Bacteria  normal  0.534329  normal  0.0270765 
 
 
-
 
NC_011891  A2cp1_3377  signal transduction histidine kinase with CheB and CheR activity  34.31 
 
 
1242 aa  383  1e-105  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3183  signal transduction histidine kinase  34.43 
 
 
1279 aa  385  1e-105  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0905  putative PAS/PAC sensor protein  35.84 
 
 
1170 aa  384  1e-105  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.968727 
 
 
-
 
NC_008340  Mlg_1118  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  33.82 
 
 
852 aa  383  1e-105  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.742809 
 
 
-
 
NC_013730  Slin_3102  signal transduction histidine kinase with CheB and CheR activity  34.6 
 
 
1418 aa  381  1e-104  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4639  signal transduction histidine kinase with CheB and CheR activity  33.45 
 
 
1453 aa  379  1e-103  Haliangium ochraceum DSM 14365  Bacteria  normal  0.432269  normal 
 
 
-
 
NC_007643  Rru_A1500  Signal transduction histidine kinase (STHK) with CheB and CheR activity  34.44 
 
 
1483 aa  379  1e-103  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2264  putative PAS/PAC sensor protein  35.16 
 
 
1165 aa  376  1e-103  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620072  normal  0.0600346 
 
 
-
 
NC_013440  Hoch_1404  signal transduction histidine kinase with CheB and CheR activity  34.35 
 
 
1759 aa  375  1e-102  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2487  signal transduction histidine kinase with CheB and CheR activity  33.55 
 
 
1535 aa  374  1e-102  Desulfovibrio vulgaris DP4  Bacteria  normal  0.162467  normal  0.455724 
 
 
-
 
NC_008044  TM1040_1028  signal transduction histidine kinase with CheB and CheR activity  31.77 
 
 
1248 aa  370  1e-101  Ruegeria sp. TM1040  Bacteria  normal  normal  0.507304 
 
 
-
 
NC_007348  Reut_B4915  PAS  34.42 
 
 
1384 aa  367  1e-100  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5252  signal transduction histidine kinase with CheB and CheR activity  33.62 
 
 
1698 aa  365  2e-99  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_12648  Signal Transduction Histidine Kinase (STHK) with CheB and CheRactivity  32.3 
 
 
1200 aa  365  2e-99  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3013  MCP methyltransferase, CheR-type  34.27 
 
 
877 aa  363  1e-98  Rhodoferax ferrireducens T118  Bacteria  normal  0.404945  n/a   
 
 
-
 
NC_013440  Hoch_3278  signal transduction histidine kinase with CheB and CheR activity  33.55 
 
 
2468 aa  362  1e-98  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0267066 
 
 
-
 
NC_010725  Mpop_0310  MCP methyltransferase, CheR-type  33.51 
 
 
1149 aa  362  1e-98  Methylobacterium populi BJ001  Bacteria  normal  0.512157  normal 
 
 
-
 
NC_008576  Mmc1_3390  MCP methyltransferase, CheR-type  40.8 
 
 
617 aa  362  2e-98  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5776  putative PAS/PAC sensor protein  33.25 
 
 
1160 aa  362  2e-98  Sinorhizobium medicae WSM419  Bacteria  normal  0.491611  normal  0.0137055 
 
 
-
 
NC_010580  Bind_3835  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  32.64 
 
 
1167 aa  359  9.999999999999999e-98  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4422  signal transduction histidine kinase with CheB and CheR activity  32.72 
 
 
1274 aa  359  9.999999999999999e-98  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.381764  normal 
 
 
-
 
NC_008752  Aave_2417  signal transduction histidine kinase with CheB and CheR activity  33.58 
 
 
1535 aa  358  1.9999999999999998e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  0.117494  normal 
 
 
-
 
NC_007908  Rfer_2355  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  41.27 
 
 
1008 aa  356  1e-96  Rhodoferax ferrireducens T118  Bacteria  normal  0.71741  n/a   
 
 
-
 
NC_010086  Bmul_3193  signal transduction histidine kinase with CheB and CheR activity  33.68 
 
 
1380 aa  355  1e-96  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.112764 
 
 
-
 
NC_013037  Dfer_5571  signal transduction histidine kinase with CheB and CheR activity  31.4 
 
 
1218 aa  355  2e-96  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.273526  normal 
 
 
-
 
NC_010581  Bind_0707  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  33.55 
 
 
1190 aa  352  1e-95  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3018  signal transduction histidine kinase with CheB and CheR activity  32.95 
 
 
1371 aa  351  3e-95  Pseudomonas putida GB-1  Bacteria  normal  normal  0.980757 
 
 
-
 
NC_010505  Mrad2831_5709  MCP methyltransferase, CheR-type  33.93 
 
 
853 aa  350  9e-95  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.729466 
 
 
-
 
NC_011004  Rpal_3739  MCP methyltransferase, CheR-type  32.54 
 
 
1045 aa  348  2e-94  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1237  chemotaxis response regulator (methyltransferase)  32.49 
 
 
1618 aa  346  8.999999999999999e-94  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5176  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  31.68 
 
 
1404 aa  343  9e-93  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.190634 
 
 
-
 
NC_007484  Noc_1601  CheB methylesterase, CheR methyltransferase, hybrid histidine kinase  30.97 
 
 
1222 aa  340  8e-92  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.472526  n/a   
 
 
-
 
NC_007961  Nham_4605  MCP methyltransferase, CheR-type  31.34 
 
 
1092 aa  336  1e-90  Nitrobacter hamburgensis X14  Bacteria  normal  0.315944  n/a   
 
 
-
 
NC_009467  Acry_3169  signal transduction histidine kinase with CheB and CheR activity  41.88 
 
 
1445 aa  330  6e-89  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1302  signal transduction histidine kinase with CheB and CheR activity  31.6 
 
 
1220 aa  321  3e-86  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.772751 
 
 
-
 
NC_011145  AnaeK_0372  signal transduction histidine kinase with CheB and CheR activity  39.23 
 
 
1233 aa  315  2.9999999999999996e-84  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4430  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  38.64 
 
 
1158 aa  313  5.999999999999999e-84  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4696  signal transduction histidine kinase with CheB and CheR activity  32.04 
 
 
1214 aa  313  6.999999999999999e-84  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6264  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  32.34 
 
 
1163 aa  294  5e-78  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6211  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  30.68 
 
 
1061 aa  294  6e-78  Methylobacterium sp. 4-46  Bacteria  normal  0.820077  normal  0.703655 
 
 
-
 
NC_007953  Bxe_C0521  multi sensor hybrid histidine kinase  37.02 
 
 
1344 aa  291  2e-77  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1297  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  29.84 
 
 
1168 aa  289  2e-76  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2975  diguanylate cyclase with PAS/PAC sensor  37.39 
 
 
1084 aa  285  2.0000000000000002e-75  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1716  MCP methyltransferase, CheR-type  36.95 
 
 
856 aa  283  8.000000000000001e-75  Halorhodospira halophila SL1  Bacteria  normal  0.92135  n/a   
 
 
-
 
NC_002977  MCA1246  methyltransferase CheR, putative  32.71 
 
 
1378 aa  278  3e-73  Methylococcus capsulatus str. Bath  Bacteria  normal  0.271052  n/a   
 
 
-
 
NC_007952  Bxe_B1520  signal transduction histidine kinase (STHK) with CheB and CheR activity  36.59 
 
 
1303 aa  278  4e-73  Burkholderia xenovorans LB400  Bacteria  normal  0.124967  normal 
 
 
-
 
NC_011368  Rleg2_5237  MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor  30.16 
 
 
1324 aa  268  2e-70  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.395635 
 
 
-
 
NC_007964  Nham_3990  MCP methyltransferase, CheR-type  38.02 
 
 
432 aa  259  2e-67  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5175  MCP methyltransferase, CheR-type  28.64 
 
 
823 aa  256  9e-67  Burkholderia phymatum STM815  Bacteria  normal  normal  0.367936 
 
 
-
 
NC_007348  Reut_B5191  CheB methylesterase:MCP methyltransferase, CheR-type  30.56 
 
 
813 aa  255  2.0000000000000002e-66  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0566  MCP methyltransferase, CheR-type with PAS/PAC sensor  33.94 
 
 
1193 aa  253  1e-65  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1989  MCP methyltransferase, CheR-type with PAS/PAC sensor  31.1 
 
 
1110 aa  230  6e-59  Spirosoma linguale DSM 74  Bacteria  normal  0.175442  normal  0.013335 
 
 
-
 
NC_013132  Cpin_3640  MCP methyltransferase, CheR-type with PAS/PAC sensor  29.86 
 
 
1303 aa  223  9e-57  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.581797 
 
 
-
 
NC_008789  Hhal_0370  protein-glutamate O-methyltransferase  30.44 
 
 
639 aa  223  9e-57  Halorhodospira halophila SL1  Bacteria  normal  0.181962  n/a   
 
 
-
 
NC_010717  PXO_03023  methyltransferase  32.95 
 
 
604 aa  214  4.9999999999999996e-54  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.361036  n/a   
 
 
-
 
NC_014248  Aazo_0227  MCP methyltransferase  29.26 
 
 
631 aa  209  1e-52  'Nostoc azollae' 0708  Bacteria  normal  0.993793  n/a   
 
 
-
 
NC_009622  Smed_6341  putative PAS/PAC sensor protein  32.62 
 
 
629 aa  201  3e-50  Sinorhizobium medicae WSM419  Bacteria  normal  0.433344  normal  0.230755 
 
 
-
 
NC_011729  PCC7424_0433  MCP methyltransferase, CheR-type with PAS/PAC sensor  28.71 
 
 
618 aa  194  6e-48  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_2635  CheB methylesterase  42.13 
 
 
262 aa  181  4e-44  Magnetococcus sp. MC-1  Bacteria  normal  0.177706  normal 
 
 
-
 
NC_011884  Cyan7425_3121  MCP methyltransferase, CheR-type with PAS/PAC sensor  37.1 
 
 
617 aa  174  6.999999999999999e-42  Cyanothece sp. PCC 7425  Bacteria  normal  0.0152355  normal  0.805919 
 
 
-
 
NC_009622  Smed_6342  CheB methylesterase  34.62 
 
 
336 aa  164  5.0000000000000005e-39  Sinorhizobium medicae WSM419  Bacteria  normal  0.582664  normal  0.191496 
 
 
-
 
NC_009637  MmarC7_0177  protein-glutamate O-methyltransferase  34.96 
 
 
270 aa  158  3e-37  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009135  MmarC5_0737  protein-glutamate O-methyltransferase  32.39 
 
 
270 aa  150  1.0000000000000001e-34  Methanococcus maripaludis C5  Archaea  normal  0.730545  n/a   
 
 
-
 
NC_009975  MmarC6_1725  MCP methyltransferase, CheR-type  32.93 
 
 
270 aa  148  5e-34  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_1581  protein-glutamate O-methyltransferase  35.77 
 
 
269 aa  147  6e-34  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.175681  normal  0.125652 
 
 
-
 
NC_007355  Mbar_A0983  chemotaxis protein methyltransferase  34.9 
 
 
302 aa  144  5e-33  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009634  Mevan_0259  protein-glutamate O-methyltransferase  32.26 
 
 
279 aa  144  5e-33  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2113  MCP methyltransferase, CheR-type  28.12 
 
 
565 aa  144  8e-33  Magnetococcus sp. MC-1  Bacteria  normal  0.982588  normal 
 
 
-
 
NC_010506  Swoo_1962  MCP methyltransferase, CheR-type  32.45 
 
 
279 aa  141  3.9999999999999997e-32  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0162659  normal  0.0775956 
 
 
-
 
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