9 homologs were found in PanDaTox collection
for query gene TM1040_0798 on replicon NC_008044
Organism: Ruegeria sp. TM1040



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008044  TM1040_0798  hypothetical protein  100 
 
 
193 aa  397  9.999999999999999e-111  Ruegeria sp. TM1040  Bacteria  normal  decreased coverage  0.000000625591 
 
 
-
 
NC_008044  TM1040_1674  hypothetical protein  30.77 
 
 
189 aa  87.4  1e-16  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1322  NusG antitermination factor  32.71 
 
 
173 aa  50.4  0.00002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0848  NusG antitermination factor  31.15 
 
 
354 aa  44.7  0.0009  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.000000981169  n/a   
 
 
-
 
NC_008347  Mmar10_1807  transcription antitermination protein nusG  25.83 
 
 
177 aa  43.1  0.002  Maricaulis maris MCS10  Bacteria  normal  0.379623  normal  0.264433 
 
 
-
 
NC_009616  Tmel_0641  NusG antitermination factor  29.47 
 
 
356 aa  42.4  0.004  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.000301277  n/a   
 
 
-
 
NC_011830  Dhaf_0405  NusG antitermination factor  29.81 
 
 
175 aa  42.4  0.004  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000000000272103  n/a   
 
 
-
 
NC_014150  Bmur_1953  NusG antitermination factor  25.26 
 
 
195 aa  41.6  0.007  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00519694  n/a   
 
 
-
 
NC_013501  Rmar_1103  NusG antitermination factor  39.22 
 
 
186 aa  41.6  0.008  Rhodothermus marinus DSM 4252  Bacteria  hitchhiker  0.00324857  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>