15 homologs were found in PanDaTox collection
for query gene TDE1988 on replicon NC_002967
Organism: Treponema denticola ATCC 35405



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002967  TDE1988  hypothetical protein  100 
 
 
923 aa  1883    Treponema denticola ATCC 35405  Bacteria  normal  0.36521  n/a   
 
 
-
 
NC_014150  Bmur_1234  trep  25.72 
 
 
924 aa  145  4e-33  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00000000941039  n/a   
 
 
-
 
NC_009718  Fnod_0538  hypothetical protein  25.35 
 
 
885 aa  65.9  0.000000003  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.000796497  n/a   
 
 
-
 
NC_010483  TRQ2_1792  hypothetical protein  27.31 
 
 
836 aa  59.7  0.0000003  Thermotoga sp. RQ2  Bacteria  normal  0.201909  n/a   
 
 
-
 
NC_013730  Slin_1741  hypothetical protein  21.28 
 
 
977 aa  57  0.000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_1733  hypothetical protein  27.17 
 
 
836 aa  55.8  0.000003  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1730  WD40 domain protein beta Propeller  21.51 
 
 
982 aa  55.8  0.000003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.16258  n/a   
 
 
-
 
NC_014212  Mesil_2423  WD40 domain protein beta Propeller  21.6 
 
 
881 aa  52.4  0.00004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010830  Aasi_0028  hypothetical protein  23.75 
 
 
914 aa  49.3  0.0004  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_013946  Mrub_0325  WD40 domain-containing protein beta Propeller  25.75 
 
 
901 aa  47  0.002  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1737  WD-40-like beta propeller repeat-containing protein  22.86 
 
 
1021 aa  46.2  0.003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.349792  n/a   
 
 
-
 
NC_009675  Anae109_2060  WD40 domain-containing protein  26.9 
 
 
1206 aa  45.8  0.003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.456517  normal  0.995925 
 
 
-
 
NC_011891  A2cp1_2193  WD40 domain protein beta Propeller  24.6 
 
 
1077 aa  46.2  0.003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5623  WD40 domain protein beta Propeller  21.95 
 
 
956 aa  45.4  0.005  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.101899 
 
 
-
 
NC_011145  AnaeK_2102  WD40 domain protein beta Propeller  24.6 
 
 
1078 aa  44.3  0.01  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
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