More than 300 homologs were found in PanDaTox collection
for query gene TBFG_10833 on replicon NC_009565
Organism: Mycobacterium tuberculosis F11



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009565  TBFG_10833  transcriptional regulatory protein  100 
 
 
255 aa  499  1e-140  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00597919 
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  76.17 
 
 
257 aa  380  1e-105  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  76.17 
 
 
257 aa  380  1e-105  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  76.17 
 
 
257 aa  380  1e-105  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  78.42 
 
 
278 aa  373  1e-102  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal 
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  74.53 
 
 
267 aa  365  1e-100  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  75.22 
 
 
270 aa  335  5e-91  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  74.03 
 
 
243 aa  330  2e-89  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  74.44 
 
 
250 aa  320  9.999999999999999e-87  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  68.33 
 
 
237 aa  291  9e-78  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  64.05 
 
 
237 aa  290  1e-77  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  64.16 
 
 
251 aa  286  2e-76  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  64.13 
 
 
232 aa  286  2.9999999999999996e-76  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  67.26 
 
 
256 aa  285  5e-76  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.0528352 
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  61.09 
 
 
239 aa  283  2.0000000000000002e-75  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0279779 
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  64.91 
 
 
259 aa  282  3.0000000000000004e-75  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  60.73 
 
 
250 aa  282  3.0000000000000004e-75  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  62.45 
 
 
261 aa  282  4.0000000000000003e-75  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  68.42 
 
 
264 aa  278  7e-74  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  60.67 
 
 
247 aa  277  1e-73  Frankia sp. EAN1pec  Bacteria  normal  normal  0.186762 
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  58.97 
 
 
239 aa  275  7e-73  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  60 
 
 
253 aa  273  2.0000000000000002e-72  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  62.18 
 
 
240 aa  272  5.000000000000001e-72  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  68.27 
 
 
249 aa  271  9e-72  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  58.87 
 
 
255 aa  270  1e-71  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  60.62 
 
 
257 aa  270  2e-71  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  61.64 
 
 
241 aa  263  3e-69  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000121276 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  59.41 
 
 
243 aa  263  3e-69  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  59.57 
 
 
248 aa  261  6.999999999999999e-69  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.190602 
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  61.64 
 
 
249 aa  260  2e-68  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal 
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  57.4 
 
 
236 aa  257  1e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  58.18 
 
 
232 aa  243  1.9999999999999999e-63  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  57.53 
 
 
232 aa  241  7e-63  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  49.39 
 
 
266 aa  238  5.999999999999999e-62  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  42.75 
 
 
296 aa  216  2.9999999999999998e-55  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009565  TBFG_12898  transcriptional regulator  47.58 
 
 
252 aa  164  2.0000000000000002e-39  Mycobacterium tuberculosis F11  Bacteria  normal  0.385025  normal 
 
 
-
 
NC_013169  Ksed_03550  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  42.68 
 
 
261 aa  148  7e-35  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.329191  normal 
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  46.67 
 
 
258 aa  135  6.0000000000000005e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  42.21 
 
 
238 aa  125  8.000000000000001e-28  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  36.41 
 
 
232 aa  121  9e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  50 
 
 
217 aa  119  4.9999999999999996e-26  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  37.7 
 
 
229 aa  119  4.9999999999999996e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  36.08 
 
 
223 aa  115  5e-25  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  36.08 
 
 
223 aa  115  5e-25  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1191  response regulator  36.6 
 
 
223 aa  115  6e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  44.8 
 
 
236 aa  115  6.9999999999999995e-25  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_006274  BCZK1193  response regulator  36.08 
 
 
223 aa  115  7.999999999999999e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  36.08 
 
 
223 aa  115  7.999999999999999e-25  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013552  DhcVS_944  transcriptional regulator  45.45 
 
 
223 aa  114  1.0000000000000001e-24  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  36.08 
 
 
223 aa  114  1.0000000000000001e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  36.08 
 
 
223 aa  114  1.0000000000000001e-24  Bacillus cereus G9842  Bacteria  normal  normal  0.910988 
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  36.08 
 
 
223 aa  114  1.0000000000000001e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1126  transcriptional regulator  44.7 
 
 
223 aa  113  3e-24  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.0000289398  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  35 
 
 
237 aa  113  3e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  37.88 
 
 
231 aa  112  7.000000000000001e-24  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  36.6 
 
 
223 aa  111  1.0000000000000001e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  35.57 
 
 
223 aa  111  1.0000000000000001e-23  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  39.58 
 
 
236 aa  111  1.0000000000000001e-23  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  34.36 
 
 
235 aa  110  1.0000000000000001e-23  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  35.57 
 
 
223 aa  111  1.0000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  36.67 
 
 
235 aa  110  2.0000000000000002e-23  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_009092  Shew_3419  two component transcriptional regulator  38.07 
 
 
242 aa  110  2.0000000000000002e-23  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  36.67 
 
 
235 aa  109  3e-23  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  36.67 
 
 
235 aa  110  3e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  36.67 
 
 
235 aa  110  3e-23  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  36.67 
 
 
235 aa  110  3e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  36.67 
 
 
235 aa  110  3e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  36.67 
 
 
235 aa  110  3e-23  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_010816  BLD_1073  putative response regulator  33.62 
 
 
234 aa  109  3e-23  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  36.67 
 
 
235 aa  110  3e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  36.67 
 
 
235 aa  110  3e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  36.67 
 
 
235 aa  110  3e-23  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_011830  Dhaf_2286  two component transcriptional regulator, winged helix family  35.18 
 
 
231 aa  110  3e-23  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000188753  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  34.67 
 
 
236 aa  110  3e-23  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  36.67 
 
 
235 aa  109  4.0000000000000004e-23  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_009455  DehaBAV1_0955  two component transcriptional regulator  42.96 
 
 
223 aa  109  4.0000000000000004e-23  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0997  response regulator receiver  36.98 
 
 
228 aa  109  5e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1600  two component transcriptional regulator  41.45 
 
 
224 aa  108  6e-23  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000237714  n/a   
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  38.54 
 
 
226 aa  108  8.000000000000001e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  38.51 
 
 
234 aa  108  8.000000000000001e-23  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  35.11 
 
 
233 aa  108  1e-22  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00991602 
 
 
-
 
NC_013165  Shel_19870  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  53.85 
 
 
224 aa  108  1e-22  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.931606  normal 
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  36 
 
 
235 aa  108  1e-22  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  36.53 
 
 
228 aa  107  2e-22  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  42.4 
 
 
224 aa  106  3e-22  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  38.51 
 
 
235 aa  106  3e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  32.73 
 
 
239 aa  106  3e-22  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  37.58 
 
 
228 aa  106  4e-22  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  36.84 
 
 
229 aa  106  4e-22  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4687  two component transcriptional regulator, winged helix family  34.38 
 
 
230 aa  106  4e-22  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000000280381  n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  38.37 
 
 
226 aa  105  5e-22  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  36.13 
 
 
228 aa  105  5e-22  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  36.84 
 
 
229 aa  105  6e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  37.99 
 
 
226 aa  105  6e-22  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  33.69 
 
 
223 aa  105  7e-22  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_013235  Namu_4929  two component transcriptional regulator, winged helix family  38.33 
 
 
226 aa  105  1e-21  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0578  two component transcriptional regulator  38.22 
 
 
240 aa  104  1e-21  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0082  two component transcriptional regulator  37.19 
 
 
228 aa  105  1e-21  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0875  two component transcriptional regulator  35.96 
 
 
242 aa  103  2e-21  Petrotoga mobilis SJ95  Bacteria  decreased coverage  0.000486966  n/a   
 
 
-
 
NC_011830  Dhaf_0940  two component transcriptional regulator, winged helix family  36.56 
 
 
237 aa  103  2e-21  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.324642  n/a   
 
 
-
 
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