More than 300 homologs were found in PanDaTox collection
for query gene Synpcc7942_2122 on replicon NC_007604
Organism: Synechococcus elongatus PCC 7942



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  100 
 
 
391 aa  808    Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  72.56 
 
 
379 aa  581  1.0000000000000001e-165  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  72.37 
 
 
389 aa  575  1.0000000000000001e-163  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  70.45 
 
 
380 aa  571  1.0000000000000001e-162  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  70.45 
 
 
380 aa  571  1.0000000000000001e-162  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  71.7 
 
 
384 aa  566  1e-160  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  72.49 
 
 
388 aa  555  1e-157  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  70.13 
 
 
385 aa  547  1e-154  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  61.05 
 
 
386 aa  464  9.999999999999999e-131  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  58.42 
 
 
380 aa  464  1e-129  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  57.22 
 
 
379 aa  455  1e-127  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  60.11 
 
 
398 aa  452  1.0000000000000001e-126  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  58.49 
 
 
379 aa  444  1e-123  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  55.35 
 
 
379 aa  441  1e-123  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_007577  PMT9312_0848  carbamoyl phosphate synthase small subunit  53.48 
 
 
379 aa  437  1e-121  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  54.81 
 
 
379 aa  436  1e-121  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_0259  carbamoyl phosphate synthase small subunit  54.47 
 
 
384 aa  429  1e-119  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_09281  carbamoyl phosphate synthase small subunit  54.47 
 
 
384 aa  429  1e-119  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.87193  normal  0.0301636 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  56.53 
 
 
376 aa  418  1e-116  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  57.87 
 
 
386 aa  414  1e-114  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  57.07 
 
 
386 aa  410  1e-113  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  57.34 
 
 
374 aa  405  1.0000000000000001e-112  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  54.5 
 
 
377 aa  406  1.0000000000000001e-112  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  54.67 
 
 
374 aa  398  9.999999999999999e-111  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  54.93 
 
 
374 aa  398  9.999999999999999e-111  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  55.23 
 
 
391 aa  397  1e-109  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  54.5 
 
 
383 aa  394  1e-108  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  54.84 
 
 
373 aa  394  1e-108  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  54.13 
 
 
374 aa  389  1e-107  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  52.96 
 
 
369 aa  389  1e-107  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  55.43 
 
 
372 aa  389  1e-107  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  54.2 
 
 
372 aa  390  1e-107  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  54.4 
 
 
374 aa  390  1e-107  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  55.73 
 
 
373 aa  390  1e-107  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  53.48 
 
 
369 aa  387  1e-106  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  54.59 
 
 
373 aa  386  1e-106  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  52.29 
 
 
379 aa  381  1e-105  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  54.32 
 
 
373 aa  384  1e-105  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  53.39 
 
 
373 aa  384  1e-105  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  52.02 
 
 
369 aa  384  1e-105  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  54.32 
 
 
373 aa  384  1e-105  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  52.82 
 
 
371 aa  381  1e-104  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_013889  TK90_0698  carbamoyl-phosphate synthase, small subunit  52.69 
 
 
377 aa  380  1e-104  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.110228 
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  54.38 
 
 
373 aa  380  1e-104  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4372  carbamoyl phosphate synthase small subunit  48.02 
 
 
368 aa  376  1e-103  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  51.61 
 
 
367 aa  377  1e-103  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0133  carbamoyl-phosphate synthase, small subunit  51.33 
 
 
378 aa  376  1e-103  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  53.68 
 
 
359 aa  376  1e-103  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  51.71 
 
 
385 aa  372  1e-102  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  50.65 
 
 
397 aa  373  1e-102  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  52.24 
 
 
381 aa  374  1e-102  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  51.18 
 
 
393 aa  372  1e-102  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  51.04 
 
 
394 aa  369  1e-101  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  53.26 
 
 
358 aa  368  1e-101  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  51.48 
 
 
367 aa  371  1e-101  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  51.49 
 
 
381 aa  368  1e-101  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  52 
 
 
381 aa  370  1e-101  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  50.26 
 
 
384 aa  371  1e-101  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_009092  Shew_2839  carbamoyl phosphate synthase small subunit  51.84 
 
 
390 aa  369  1e-101  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00340084  normal  0.0286195 
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  52.8 
 
 
377 aa  369  1e-101  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  51.33 
 
 
381 aa  370  1e-101  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_002977  MCA1853  carbamoyl phosphate synthase small subunit  53.1 
 
 
378 aa  365  1e-100  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0936768  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  51.49 
 
 
381 aa  366  1e-100  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  51.49 
 
 
381 aa  366  1e-100  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  50 
 
 
440 aa  365  1e-100  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  51.49 
 
 
381 aa  366  1e-100  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  47.33 
 
 
376 aa  367  1e-100  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  51.64 
 
 
385 aa  365  1e-100  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  51.2 
 
 
382 aa  367  1e-100  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  51.06 
 
 
382 aa  367  1e-100  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  51.49 
 
 
381 aa  365  1e-100  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  52.02 
 
 
366 aa  368  1e-100  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  51.49 
 
 
381 aa  366  1e-100  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  51.06 
 
 
391 aa  367  1e-100  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2002  carbamoyl-phosphate synthase, small subunit  49.87 
 
 
379 aa  366  1e-100  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  51.49 
 
 
381 aa  366  1e-100  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  51.46 
 
 
379 aa  367  1e-100  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  52.45 
 
 
359 aa  367  1e-100  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  51.49 
 
 
381 aa  366  1e-100  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  51.06 
 
 
382 aa  366  1e-100  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  51.06 
 
 
382 aa  366  1e-100  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  52.41 
 
 
381 aa  365  1e-100  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  51.89 
 
 
380 aa  364  1e-99  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  48.95 
 
 
383 aa  364  1e-99  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  50 
 
 
401 aa  364  1e-99  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0995  carbamoyl phosphate synthase small subunit  52.53 
 
 
381 aa  364  1e-99  Shewanella denitrificans OS217  Bacteria  normal  0.055995  n/a   
 
 
-
 
NC_010002  Daci_4932  carbamoyl-phosphate synthase, small subunit  50.92 
 
 
388 aa  364  1e-99  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.259128 
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  51.07 
 
 
393 aa  363  2e-99  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_003910  CPS_3459  carbamoyl phosphate synthase small subunit  49.73 
 
 
383 aa  363  2e-99  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3103  carbamoyl-phosphate synthase, small subunit  51.03 
 
 
397 aa  364  2e-99  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.450122  normal 
 
 
-
 
NC_007404  Tbd_1127  carbamoyl-phosphate synthase small subunit  51.32 
 
 
379 aa  363  2e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.390679  normal 
 
 
-
 
NC_014230  CA2559_05860  carbamoyl-phosphate synthase small subunit  47.38 
 
 
373 aa  364  2e-99  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.261865  n/a   
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  50.82 
 
 
369 aa  363  3e-99  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_009370  OSTLU_28074  Carbamoyl-phosphate synthase S chain  48.67 
 
 
415 aa  363  3e-99  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.210414 
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  50.52 
 
 
416 aa  363  3e-99  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009511  Swit_0435  carbamoyl phosphate synthase small subunit  48.95 
 
 
392 aa  363  4e-99  Sphingomonas wittichii RW1  Bacteria  normal  0.29183  normal 
 
 
-
 
NC_008060  Bcen_0809  carbamoyl phosphate synthase small subunit  51.62 
 
 
380 aa  363  4e-99  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  51.62 
 
 
380 aa  363  4e-99  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  50.67 
 
 
384 aa  362  7.0000000000000005e-99  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_011992  Dtpsy_1456  carbamoyl-phosphate synthase, small subunit  51.46 
 
 
390 aa  361  9e-99  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
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