19 homologs were found in PanDaTox collection
for query gene Syncc9902_1728 on replicon NC_007513
Organism: Synechococcus sp. CC9902



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007513  Syncc9902_1728  photosystem I reaction center subunit III  100 
 
 
158 aa  323  4e-88  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0634  photosystem I reaction center subunit III (PsaF)  87.34 
 
 
158 aa  264  3e-70  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1250  photosystem I reaction center subunit III precursor  64.15 
 
 
159 aa  202  2e-51  Synechococcus elongatus PCC 7942  Bacteria  hitchhiker  0.0041736  normal 
 
 
-
 
NC_008820  P9303_06701  photosystem I PsaF protein (subunit III)  57.65 
 
 
170 aa  195  2e-49  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_4002  photosystem I reaction center protein PsaF subunit III  53.05 
 
 
164 aa  172  2e-42  Cyanothece sp. PCC 7425  Bacteria  normal  0.0318686  hitchhiker  3.20389e-09 
 
 
-
 
NC_011729  PCC7424_1183  photosystem I reaction center protein PsaF subunit III  54.88 
 
 
162 aa  171  4e-42  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.366807 
 
 
-
 
NC_013161  Cyan8802_2714  photosystem I reaction center protein PsaF subunit III  53.94 
 
 
165 aa  168  3e-41  Cyanothece sp. PCC 8802  Bacteria  unclonable  7.62882e-07  normal  0.402807 
 
 
-
 
NC_011726  PCC8801_3402  photosystem I reaction center protein PsaF subunit III  53.94 
 
 
165 aa  168  3e-41  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_1478  photosystem I reaction center protein PsaF, subunit III  52.44 
 
 
164 aa  160  6e-39  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  1.94219e-12  normal 
 
 
-
 
NC_008819  NATL1_05241  photosystem I PsaF protein (subunit III)  47.28 
 
 
185 aa  157  7e-38  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.161495 
 
 
-
 
NC_007335  PMN2A_1801  photosystem I PsaF protein (subunit III)  47.28 
 
 
185 aa  156  1e-37  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1634  photosystem I reaction center protein PsaF, subunit III  52.73 
 
 
163 aa  156  1e-37  Trichodesmium erythraeum IMS101  Bacteria  normal  0.764261  normal 
 
 
-
 
NC_014248  Aazo_4978  photosystem I reaction center protein PsaF subunit III  48.17 
 
 
164 aa  153  1e-36  'Nostoc azollae' 0708  Bacteria  unclonable  1.64624e-06  n/a   
 
 
-
 
NC_009976  P9211_04691  photosystem I PsaF protein (subunit III)  45.9 
 
 
183 aa  142  2e-33  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.23747  normal  0.566924 
 
 
-
 
NC_009091  P9301_04941  photosystem I PsaF protein (subunit III)  40.76 
 
 
184 aa  132  1e-30  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_05241  photosystem I PsaF protein (subunit III)  40.76 
 
 
184 aa  132  1e-30  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0469  photosystem I PsaF protein (subunit III)  40.76 
 
 
184 aa  131  3e-30  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_05331  photosystem I PsaF protein (subunit III)  45.14 
 
 
184 aa  128  3e-29  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_009358  OSTLU_31108  psaF, PSI-F, subunit III, photosystem I polypeptide  39.38 
 
 
232 aa  108  2e-23  Ostreococcus lucimarinus CCE9901  Eukaryota  decreased coverage  0.000169321  n/a   
 
 
-
 
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