70 homologs were found in PanDaTox collection
for query gene Syncc9605_1200 on replicon NC_007516
Organism: Synechococcus sp. CC9605



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007516  Syncc9605_1200  putative anti-sigma regulatory factor (serine/threonine protein kinase)  100 
 
 
145 aa  294  3e-79  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_1270  putative anti-sigma regulatory factor (serine/threonine protein kinase)  80.45 
 
 
133 aa  206  6e-53  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_16351  anti-sigma regulatory factor (Ser/Thr protein kinase)  70.37 
 
 
164 aa  200  7e-51  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.109557 
 
 
-
 
NC_009976  P9211_07231  anti-sigma regulatory factor (Ser/Thr protein kinase)  72.09 
 
 
131 aa  200  7e-51  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal  0.152597 
 
 
-
 
NC_007335  PMN2A_0138  anti-sigma regulatory factor (Ser/Thr protein kinase)  64.62 
 
 
130 aa  175  2e-43  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_07701  anti-sigma regulatory factor (Ser/Thr protein kinase)  63.08 
 
 
130 aa  172  9.999999999999999e-43  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.0584131 
 
 
-
 
NC_008816  A9601_09371  anti-sigma regulatory factor (Ser/Thr protein kinase)  52.76 
 
 
144 aa  156  7e-38  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.596891  n/a   
 
 
-
 
NC_008817  P9515_10061  anti-sigma regulatory factor (Ser/Thr protein kinase)  55.65 
 
 
147 aa  155  2e-37  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.292837  n/a   
 
 
-
 
NC_009091  P9301_09361  anti-sigma regulatory factor (Ser/Thr protein kinase)  51.18 
 
 
144 aa  153  1e-36  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0877  anti-sigma regulatory factor (Ser/Thr protein kinase)  50.39 
 
 
144 aa  151  2e-36  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_4084  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.26 
 
 
146 aa  92.8  1e-18  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4123  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.26 
 
 
146 aa  92.8  1e-18  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3633  putative anti-sigma regulatory factor (Ser/Thr protein kinase)  39.26 
 
 
149 aa  90.9  5e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.327688 
 
 
-
 
NC_011729  PCC7424_3304  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.23 
 
 
153 aa  89  2e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_3653  putative anti-sigma regulatory factor serine/threonine protein kinase  41.18 
 
 
149 aa  89.4  2e-17  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1438  putative anti-sigma regulatory factor  40.62 
 
 
164 aa  87  7e-17  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0533473  normal  0.759887 
 
 
-
 
NC_011884  Cyan7425_3338  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.02 
 
 
138 aa  83.2  0.000000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2243  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.94 
 
 
159 aa  72.8  0.000000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0809953  normal  0.451472 
 
 
-
 
NC_008255  CHU_3500  anti-sigma regulatory factor  33.7 
 
 
133 aa  64.3  0.0000000005  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.314034  normal 
 
 
-
 
NC_008009  Acid345_2515  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.26 
 
 
148 aa  58.2  0.00000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.538602  normal  0.204677 
 
 
-
 
NC_010814  Glov_2102  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.34 
 
 
143 aa  57.4  0.00000006  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1228  putative anti-sigma regulatory factor (serine/threonine protein kinase)  34.34 
 
 
144 aa  57.4  0.00000006  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.011235 
 
 
-
 
NC_007484  Noc_2977  anti-sigma regulatory factor (Ser/Thr protein kinase  35.42 
 
 
141 aa  57.4  0.00000006  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2056  anti-sigma regulatory factor  32.95 
 
 
143 aa  55.5  0.0000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.773482  n/a   
 
 
-
 
NC_014148  Plim_2761  response regulator receiver  29.17 
 
 
300 aa  55.1  0.0000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.428071  n/a   
 
 
-
 
NC_013411  GYMC61_2468  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.5 
 
 
141 aa  54.7  0.0000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU1426  rsbW protein, putative  33.33 
 
 
149 aa  54.3  0.0000005  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2317  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.67 
 
 
155 aa  53.5  0.0000009  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.128595  normal  0.13523 
 
 
-
 
NC_009943  Dole_0141  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.16 
 
 
160 aa  53.5  0.0000009  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2329  response regulator receiver  28.8 
 
 
301 aa  53.1  0.000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.25746  n/a   
 
 
-
 
NC_008609  Ppro_2661  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
151 aa  52.4  0.000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0789133  n/a   
 
 
-
 
NC_011898  Ccel_0401  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.37 
 
 
144 aa  52.8  0.000002  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00256167  n/a   
 
 
-
 
NC_013501  Rmar_1323  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.57 
 
 
134 aa  52.4  0.000002  Rhodothermus marinus DSM 4252  Bacteria  normal  0.105677  n/a   
 
 
-
 
NC_014148  Plim_3703  response regulator receiver  34.75 
 
 
303 aa  52  0.000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.301456  n/a   
 
 
-
 
NC_014150  Bmur_1112  putative anti-sigma regulatory factor, serine/threonine protein kinase  24 
 
 
160 aa  51.6  0.000003  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2394  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.03 
 
 
150 aa  49.7  0.00001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2901  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.12 
 
 
144 aa  49.7  0.00001  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00340315  n/a   
 
 
-
 
NC_009767  Rcas_4212  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.63 
 
 
144 aa  48.9  0.00002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.797188  normal  0.229717 
 
 
-
 
NC_011884  Cyan7425_0773  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.82 
 
 
140 aa  48.5  0.00003  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0030  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.63 
 
 
144 aa  48.1  0.00004  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.786698 
 
 
-
 
NC_013171  Apre_1471  putative signal transduction histidine kinase  30.99 
 
 
127 aa  47.8  0.00005  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1685  anti-sigma B factor  27.4 
 
 
142 aa  47.4  0.00006  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_3223  multi-sensor signal transduction histidine kinase  35.16 
 
 
654 aa  47.4  0.00007  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009972  Haur_1623  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.32 
 
 
154 aa  46.6  0.0001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1340  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.82 
 
 
139 aa  45.8  0.0002  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.00268511  unclonable  0.00000109238 
 
 
-
 
NC_011830  Dhaf_4432  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.53 
 
 
149 aa  45.1  0.0003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2999  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.72 
 
 
136 aa  45.4  0.0003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2331  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.21 
 
 
151 aa  44.7  0.0005  Rhodothermus marinus DSM 4252  Bacteria  normal  0.571842  n/a   
 
 
-
 
NC_011831  Cagg_3034  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.49 
 
 
155 aa  43.9  0.0008  Chloroflexus aggregans DSM 9485  Bacteria  normal  decreased coverage  0.00000275353 
 
 
-
 
NC_011146  Gbem_2650  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.29 
 
 
141 aa  43.9  0.0008  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1584  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.29 
 
 
141 aa  43.9  0.0008  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008009  Acid345_2985  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.21 
 
 
321 aa  43.1  0.001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.369432  normal 
 
 
-
 
NC_009767  Rcas_4100  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.85 
 
 
154 aa  43.5  0.001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39959  normal  0.110814 
 
 
-
 
NC_009523  RoseRS_3290  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.72 
 
 
160 aa  42.7  0.002  Roseiflexus sp. RS-1  Bacteria  normal  0.018648  normal 
 
 
-
 
NC_007796  Mhun_1346  histidine kinase  26.67 
 
 
390 aa  42.4  0.002  Methanospirillum hungatei JF-1  Archaea  normal  0.0129942  normal  0.400624 
 
 
-
 
NC_009972  Haur_1624  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.72 
 
 
154 aa  42.4  0.002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2744  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.14 
 
 
155 aa  42  0.002  Thermobispora bispora DSM 43833  Bacteria  normal  0.813583  normal 
 
 
-
 
NC_007512  Plut_1162  putative anti-sigma regulatory factor (serine/threonine protein kinase)  33.67 
 
 
135 aa  42.4  0.002  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.00000640606  normal  0.134591 
 
 
-
 
NC_013223  Dret_1393  putative anti-sigma regulatory factor, serine/threonine protein kinase  30 
 
 
159 aa  42  0.003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.132217  normal  0.754718 
 
 
-
 
NC_009483  Gura_2043  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.84 
 
 
141 aa  42  0.003  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000388253  n/a   
 
 
-
 
NC_011830  Dhaf_3441  anti-sigma F factor  31.11 
 
 
145 aa  42  0.003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4605  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.63 
 
 
155 aa  41.6  0.004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0373  anti-sigma F factor  26.77 
 
 
146 aa  41.2  0.005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_3289  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.84 
 
 
147 aa  41.2  0.005  Roseiflexus sp. RS-1  Bacteria  normal  0.0615968  normal 
 
 
-
 
NC_011060  Ppha_1516  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.21 
 
 
131 aa  41.2  0.005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.124385  n/a   
 
 
-
 
NC_012029  Hlac_1704  histidine kinase  34.04 
 
 
294 aa  40.8  0.006  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.318661  normal 
 
 
-
 
NC_007514  Cag_0611  putative anti-sigma regulatory factor (serine/threonine protein kinase)  31.67 
 
 
136 aa  40.4  0.008  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.0000000221562  n/a   
 
 
-
 
NC_013158  Huta_2186  histidine kinase  32.39 
 
 
383 aa  40.4  0.009  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0452975  n/a   
 
 
-
 
NC_013595  Sros_3929  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.87 
 
 
176 aa  40  0.01  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0862817  hitchhiker  0.00846982 
 
 
-
 
NC_011831  Cagg_2399  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.39 
 
 
142 aa  40  0.01  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.477606 
 
 
-
 
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