16 homologs were found in PanDaTox collection
for query gene Swoo_0641 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_0641  curli production assembly/transport component CsgE, putative  100 
 
 
131 aa  269  1e-71  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  7.25097e-06  unclonable  1.49917e-08 
 
 
-
 
NC_008321  Shewmr4_0868  curli production assembly/transport component CsgE, putative  70 
 
 
136 aa  192  1e-48  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3154  curli production assembly/transport component CsgE, putative  70 
 
 
136 aa  192  1e-48  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0969  curli production assembly/transport component CsgE, putative  68.38 
 
 
136 aa  191  2e-48  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3255  curli production assembly/transport component CsgE, putative  69.23 
 
 
136 aa  192  2e-48  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1024  curli production assembly/transport component CsgE, putative  69.84 
 
 
136 aa  187  3e-47  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1036  curli production assembly/transport component CsgE, putative  69.84 
 
 
136 aa  187  3e-47  Shewanella baltica OS195  Bacteria  normal  normal  0.730845 
 
 
-
 
NC_009052  Sbal_3336  curli production assembly/transport component CsgE, putative  69.84 
 
 
136 aa  187  3e-47  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3687  curli production assembly/transport component CsgE, putative  73.81 
 
 
135 aa  187  4e-47  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_1003  curli production assembly/transport component CsgE, putative  69.05 
 
 
136 aa  187  6e-47  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2986  curli production assembly/transport component CsgE, putative  69.47 
 
 
136 aa  186  8e-47  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2859  curli production assembly/transport component CsgE, putative  70.48 
 
 
113 aa  167  4e-41  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01504  curli production assembly/transport component  34.91 
 
 
130 aa  86.3  1e-16  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2857  assembly/transport component in curli production, CsgE precursor  38.82 
 
 
153 aa  55.1  3e-07  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.121415  n/a   
 
 
-
 
NC_007492  Pfl01_1991  curli assembly protein CsgE  28.85 
 
 
130 aa  41.2  0.005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0133038  normal  0.0969826 
 
 
-
 
NC_009512  Pput_2297  curli assembly protein CsgE  28.71 
 
 
133 aa  40  0.01  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>