13 homologs were found in PanDaTox collection
for query gene Swoo_0071 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_0071  exopolysaccharide biosynthesis protein-like protein  100 
 
 
298 aa  613  1e-175  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.019972 
 
 
-
 
NC_008781  Pnap_3188  exopolysaccharide biosynthesis protein-like protein  30.38 
 
 
296 aa  137  2e-31  Polaromonas naphthalenivorans CJ2  Bacteria  hitchhiker  0.00782189  hitchhiker  0.00453447 
 
 
-
 
NC_010498  EcSMS35_2256  hypothetical protein  25.82 
 
 
269 aa  107  2e-22  Escherichia coli SMS-3-5  Bacteria  normal  0.803632  normal 
 
 
-
 
NC_010571  Oter_3262  hypothetical protein  27.42 
 
 
293 aa  99.8  5e-20  Opitutus terrae PB90-1  Bacteria  normal  0.249418  normal  0.24171 
 
 
-
 
NC_010571  Oter_2503  hypothetical protein  23.59 
 
 
356 aa  86.3  5e-16  Opitutus terrae PB90-1  Bacteria  normal  0.394231  normal 
 
 
-
 
NC_008148  Rxyl_3094  hypothetical protein  27.17 
 
 
287 aa  76.6  0.0000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2864  hypothetical protein  25.45 
 
 
275 aa  67  0.0000000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1915  polysaccharide pyruvyl transferase  25.33 
 
 
355 aa  50.8  0.00003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0611  Exopolysaccharide biosynthesis protein-like protein  24.17 
 
 
321 aa  50.1  0.00004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.261467 
 
 
-
 
NC_007952  Bxe_B1722  hypothetical protein  24.75 
 
 
317 aa  47.4  0.0003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.257484 
 
 
-
 
NC_008146  Mmcs_3112  polysaccharide pyruvyl transferase  22.3 
 
 
320 aa  43.5  0.004  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3172  polysaccharide pyruvyl transferase  22.3 
 
 
320 aa  43.5  0.004  Mycobacterium sp. KMS  Bacteria  normal  0.475453  normal 
 
 
-
 
NC_011369  Rleg2_2968  polysaccharide pyruvyl transferase  24.22 
 
 
343 aa  43.9  0.004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.41225  normal 
 
 
-
 
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