More than 300 homologs were found in PanDaTox collection
for query gene Swit_2428 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011369  Rleg2_4271  phenylalanyl-tRNA synthetase subunit beta  49.63 
 
 
810 aa  744    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1630  phenylalanyl-tRNA synthetase, beta subunit  53.02 
 
 
807 aa  760    Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0126985 
 
 
-
 
NC_010511  M446_5318  phenylalanyl-tRNA synthetase, beta subunit  53.69 
 
 
808 aa  778    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0273897 
 
 
-
 
NC_009636  Smed_3487  phenylalanyl-tRNA synthetase subunit beta  51 
 
 
808 aa  756    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR2123  phenylalanyl-tRNA synthetase subunit beta  53.34 
 
 
804 aa  767    Brucella suis 1330  Bacteria  normal  0.615312  n/a   
 
 
-
 
NC_011365  Gdia_3094  phenylalanyl-tRNA synthetase subunit beta  47.36 
 
 
820 aa  672    Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.067961 
 
 
-
 
NC_009428  Rsph17025_2491  phenylalanyl-tRNA synthetase subunit beta  50.86 
 
 
805 aa  706    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0221  phenylalanyl-tRNA synthetase, beta subunit  53.07 
 
 
812 aa  733    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1838  phenylalanyl-tRNA synthetase, beta subunit  50.61 
 
 
810 aa  698    Methylocella silvestris BL2  Bacteria  n/a    normal  0.0684561 
 
 
-
 
NC_007406  Nwi_0065  phenylalanyl-tRNA synthetase subunit beta  49.45 
 
 
812 aa  715    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.145265 
 
 
-
 
NC_010725  Mpop_1604  phenylalanyl-tRNA synthetase, beta subunit  52.9 
 
 
807 aa  754    Methylobacterium populi BJ001  Bacteria  normal  0.140835  normal  0.0323303 
 
 
-
 
NC_010581  Bind_3247  phenylalanyl-tRNA synthetase, beta subunit  49.45 
 
 
806 aa  723    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1761  phenylalanyl-tRNA synthetase subunit beta  49.69 
 
 
805 aa  702    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0036  phenylalanyl-tRNA synthetase subunit beta  52.11 
 
 
803 aa  761    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.393053  n/a   
 
 
-
 
NC_010505  Mrad2831_3155  phenylalanyl-tRNA synthetase, beta subunit  52.22 
 
 
806 aa  764    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2428  phenylalanyl-tRNA synthetase subunit beta  100 
 
 
792 aa  1568    Sphingomonas wittichii RW1  Bacteria  normal  normal  0.153279 
 
 
-
 
NC_009667  Oant_0797  phenylalanyl-tRNA synthetase subunit beta  51.92 
 
 
804 aa  756    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3524  phenylalanyl-tRNA synthetase subunit beta  47.96 
 
 
800 aa  647    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0212  phenylalanyl-tRNA synthetase subunit beta  50.25 
 
 
802 aa  738    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0237  phenylalanyl-tRNA synthetase subunit beta  49.13 
 
 
798 aa  678    Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0047  phenylalanyl-tRNA synthetase subunit beta  51.99 
 
 
802 aa  747    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0689  phenylalanyl-tRNA synthetase subunit beta  64.41 
 
 
796 aa  956    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.428867  n/a   
 
 
-
 
NC_007802  Jann_0454  phenylalanyl-tRNA synthetase subunit beta  49.69 
 
 
800 aa  692    Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0444  phenylalanyl-tRNA synthetase subunit beta  49.94 
 
 
803 aa  720    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.341552  normal 
 
 
-
 
NC_007958  RPD_0162  phenylalanyl-tRNA synthetase subunit beta  51.18 
 
 
824 aa  741    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.676244  normal 
 
 
-
 
NC_007964  Nham_0073  phenylalanyl-tRNA synthetase subunit beta  49.63 
 
 
817 aa  736    Nitrobacter hamburgensis X14  Bacteria  normal  0.252873  n/a   
 
 
-
 
NC_008043  TM1040_3623  phenylalanyl-tRNA synthetase subunit beta  48.64 
 
 
798 aa  694    Ruegeria sp. TM1040  Bacteria  normal  normal  0.117267 
 
 
-
 
NC_008048  Sala_2783  phenylalanyl-tRNA synthetase subunit beta  65.96 
 
 
798 aa  945    Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4536  phenylalanyl-tRNA synthetase subunit beta  49.81 
 
 
807 aa  751    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.140615 
 
 
-
 
NC_008254  Meso_0677  phenylalanyl-tRNA synthetase subunit beta  51.75 
 
 
801 aa  764    Chelativorans sp. BNC1  Bacteria  normal  0.443307  n/a   
 
 
-
 
NC_009720  Xaut_1930  phenylalanyl-tRNA synthetase, beta subunit  51.36 
 
 
804 aa  724    Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0326717 
 
 
-
 
NC_009049  Rsph17029_0407  phenylalanyl-tRNA synthetase subunit beta  49.69 
 
 
805 aa  702    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.70562  normal 
 
 
-
 
NC_011989  Avi_0209  phenylalanyl-tRNA synthetase subunit beta  49.69 
 
 
807 aa  750    Agrobacterium vitis S4  Bacteria  normal  0.212777  n/a   
 
 
-
 
NC_010338  Caul_1188  phenylalanyl-tRNA synthetase subunit beta  48.9 
 
 
812 aa  691    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5551  phenylalanyl-tRNA synthetase, beta subunit  52.71 
 
 
808 aa  765    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.325824  n/a   
 
 
-
 
NC_011757  Mchl_1912  phenylalanyl-tRNA synthetase, beta subunit  49.77 
 
 
850 aa  731    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.24608 
 
 
-
 
NC_008783  BARBAKC583_1312  phenylalanyl-tRNA synthetase subunit beta  49.13 
 
 
803 aa  721    Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_2039  phenylalanyl-tRNA synthetase subunit beta  53.28 
 
 
804 aa  768    Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2262  phenylalanyl-tRNA synthetase subunit beta  49.31 
 
 
795 aa  651    Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.283733 
 
 
-
 
NC_008347  Mmar10_0132  phenylalanyl-tRNA synthetase subunit beta  48.26 
 
 
799 aa  629  1e-179  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0361  phenylalanyl-tRNA synthetase subunit beta  47.27 
 
 
827 aa  609  1e-173  Acidiphilium cryptum JF-5  Bacteria  normal  0.996315  n/a   
 
 
-
 
NC_002978  WD0425  phenylalanyl-tRNA synthetase subunit beta  39.4 
 
 
779 aa  558  1e-157  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0587  phenylalanyl-tRNA synthetase subunit beta  35.52 
 
 
785 aa  515  1e-144  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_007799  ECH_0434  phenylalanyl-tRNA synthetase subunit beta  35.51 
 
 
788 aa  506  9.999999999999999e-143  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2592  phenylalanyl-tRNA synthetase, beta subunit  37.39 
 
 
794 aa  485  1e-135  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.0126631 
 
 
-
 
NC_010717  PXO_01388  phenylalanyl-tRNA synthetase subunit beta  40.33 
 
 
792 aa  485  1e-135  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.547763  n/a   
 
 
-
 
NC_011071  Smal_2800  phenylalanyl-tRNA synthetase subunit beta  39.73 
 
 
802 aa  480  1e-134  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0432  phenylalanyl-tRNA synthetase subunit beta  38.43 
 
 
792 aa  476  1e-133  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0368  phenylalanyl-tRNA synthetase beta subunit  38.12 
 
 
796 aa  477  1e-133  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1893  phenylalanyl-tRNA synthetase subunit beta  35.8 
 
 
795 aa  472  1e-132  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3020  phenylalanyl-tRNA synthetase subunit beta  38.72 
 
 
796 aa  467  9.999999999999999e-131  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2620  phenylalanyl-tRNA synthetase subunit beta  35.83 
 
 
795 aa  467  9.999999999999999e-131  Yersinia pestis Angola  Bacteria  hitchhiker  0.00723547  normal 
 
 
-
 
NC_008340  Mlg_0763  phenylalanyl-tRNA synthetase subunit beta  38.39 
 
 
797 aa  466  9.999999999999999e-131  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1717  phenylalanyl-tRNA synthetase subunit beta  35.71 
 
 
795 aa  467  9.999999999999999e-131  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00142202  n/a   
 
 
-
 
NC_010465  YPK_1825  phenylalanyl-tRNA synthetase subunit beta  35.83 
 
 
795 aa  468  9.999999999999999e-131  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.713489  n/a   
 
 
-
 
NC_002977  MCA0698  phenylalanyl-tRNA synthetase, beta subunit  38.29 
 
 
791 aa  464  1e-129  Methylococcus capsulatus str. Bath  Bacteria  normal  0.155841  n/a   
 
 
-
 
NC_008740  Maqu_2056  phenylalanyl-tRNA synthetase subunit beta  35.59 
 
 
790 aa  463  1e-129  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2185  phenylalanyl-tRNA synthetase subunit beta  35.84 
 
 
795 aa  465  1e-129  Pectobacterium wasabiae WPP163  Bacteria  normal  0.861692  n/a   
 
 
-
 
NC_008345  Sfri_1709  phenylalanyl-tRNA synthetase subunit beta  35.38 
 
 
795 aa  459  9.999999999999999e-129  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.739174  n/a   
 
 
-
 
NC_007520  Tcr_1662  phenylalanyl-tRNA synthetase, beta subunit  34.37 
 
 
793 aa  456  1e-127  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1804  phenylalanyl-tRNA synthetase subunit beta  37.5 
 
 
793 aa  456  1e-127  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2048  phenylalanyl-tRNA synthetase subunit beta  35.67 
 
 
795 aa  455  1.0000000000000001e-126  Dickeya dadantii Ech703  Bacteria  normal  0.424555  n/a   
 
 
-
 
NC_013422  Hneap_1315  phenylalanyl-tRNA synthetase, beta subunit  35.84 
 
 
799 aa  454  1.0000000000000001e-126  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2149  phenylalanyl-tRNA synthetase subunit beta  34.94 
 
 
795 aa  453  1.0000000000000001e-126  Serratia proteamaculans 568  Bacteria  normal  0.625217  normal 
 
 
-
 
NC_009092  Shew_2215  phenylalanyl-tRNA synthetase subunit beta  35.27 
 
 
795 aa  455  1.0000000000000001e-126  Shewanella loihica PV-4  Bacteria  normal  normal  0.188862 
 
 
-
 
NC_011094  SeSA_A1433  phenylalanyl-tRNA synthetase subunit beta  34.73 
 
 
795 aa  450  1e-125  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.030197 
 
 
-
 
NC_011149  SeAg_B1835  phenylalanyl-tRNA synthetase subunit beta  34.86 
 
 
795 aa  451  1e-125  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000347523  n/a   
 
 
-
 
NC_011083  SeHA_C1466  phenylalanyl-tRNA synthetase subunit beta  34.86 
 
 
795 aa  451  1e-125  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_20470  phenylalanyl-tRNA synthetase subunit beta  36.52 
 
 
792 aa  451  1e-125  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2007  phenylalanyl-tRNA synthetase subunit beta  34.86 
 
 
795 aa  451  1e-125  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.693647 
 
 
-
 
NC_012912  Dd1591_1956  phenylalanyl-tRNA synthetase subunit beta  35.47 
 
 
795 aa  449  1e-125  Dickeya zeae Ech1591  Bacteria  normal  0.186913  n/a   
 
 
-
 
NC_011080  SNSL254_A1449  phenylalanyl-tRNA synthetase subunit beta  34.86 
 
 
795 aa  451  1e-125  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1952  phenylalanyl-tRNA synthetase subunit beta  35.22 
 
 
795 aa  451  1e-125  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_01682  phenylalanyl-tRNA synthetase beta subunit  34.98 
 
 
795 aa  446  1.0000000000000001e-124  Escherichia coli BL21(DE3)  Bacteria  normal  0.0961927  n/a   
 
 
-
 
CP001637  EcDH1_1929  phenylalanyl-tRNA synthetase, beta subunit  34.98 
 
 
795 aa  446  1.0000000000000001e-124  Escherichia coli DH1  Bacteria  hitchhiker  0.0000518334  n/a   
 
 
-
 
NC_012892  B21_01671  hypothetical protein  34.98 
 
 
795 aa  446  1.0000000000000001e-124  Escherichia coli BL21  Bacteria  normal  0.0686641  n/a   
 
 
-
 
NC_009901  Spea_2469  phenylalanyl-tRNA synthetase subunit beta  33.91 
 
 
795 aa  448  1.0000000000000001e-124  Shewanella pealeana ATCC 700345  Bacteria  normal  0.228112  n/a   
 
 
-
 
NC_009800  EcHS_A1793  phenylalanyl-tRNA synthetase subunit beta  34.98 
 
 
795 aa  446  1.0000000000000001e-124  Escherichia coli HS  Bacteria  hitchhiker  0.000955232  n/a   
 
 
-
 
NC_010513  Xfasm12_2094  phenylalanyl-tRNA synthetase subunit beta  36.38 
 
 
792 aa  447  1.0000000000000001e-124  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1918  phenylalanyl-tRNA synthetase subunit beta  34.98 
 
 
795 aa  446  1.0000000000000001e-124  Escherichia coli ATCC 8739  Bacteria  normal  0.333448  normal  0.421493 
 
 
-
 
NC_011353  ECH74115_2431  phenylalanyl-tRNA synthetase subunit beta  34.98 
 
 
795 aa  446  1e-123  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.175376  normal 
 
 
-
 
NC_009801  EcE24377A_1932  phenylalanyl-tRNA synthetase subunit beta  34.98 
 
 
795 aa  446  1e-123  Escherichia coli E24377A  Bacteria  hitchhiker  0.0000000047761  n/a   
 
 
-
 
NC_009457  VC0395_A0844  phenylalanyl-tRNA synthetase subunit beta  35.27 
 
 
795 aa  442  1e-123  Vibrio cholerae O395  Bacteria  hitchhiker  0.000000000714216  n/a   
 
 
-
 
NC_010577  XfasM23_2015  phenylalanyl-tRNA synthetase subunit beta  36.25 
 
 
792 aa  444  1e-123  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1603  phenylalanyl-tRNA synthetase subunit beta  34.77 
 
 
795 aa  445  1e-123  Shewanella denitrificans OS217  Bacteria  normal  0.643795  n/a   
 
 
-
 
NC_010498  EcSMS35_1477  phenylalanyl-tRNA synthetase subunit beta  34.85 
 
 
795 aa  444  1e-123  Escherichia coli SMS-3-5  Bacteria  normal  0.020093  normal 
 
 
-
 
NC_010658  SbBS512_E1955  phenylalanyl-tRNA synthetase subunit beta  34.98 
 
 
795 aa  444  1e-123  Shigella boydii CDC 3083-94  Bacteria  normal  0.111711  n/a   
 
 
-
 
NC_008321  Shewmr4_1809  phenylalanyl-tRNA synthetase subunit beta  34.19 
 
 
795 aa  443  1e-123  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1864  phenylalanyl-tRNA synthetase subunit beta  34.07 
 
 
795 aa  442  1e-123  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2672  phenylalanyl-tRNA synthetase subunit beta  35.06 
 
 
794 aa  442  9.999999999999999e-123  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0492  phenylalanyl-tRNA synthetase subunit beta  34.94 
 
 
792 aa  441  9.999999999999999e-123  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.229173  n/a   
 
 
-
 
NC_007947  Mfla_1998  phenylalanyl-tRNA synthetase beta subunit  37.04 
 
 
784 aa  440  9.999999999999999e-123  Methylobacillus flagellatus KT  Bacteria  normal  0.109142  normal 
 
 
-
 
NC_009831  Ssed_2597  phenylalanyl-tRNA synthetase subunit beta  33.42 
 
 
795 aa  442  9.999999999999999e-123  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0200655  normal 
 
 
-
 
NC_008322  Shewmr7_2168  phenylalanyl-tRNA synthetase subunit beta  34.07 
 
 
795 aa  441  9.999999999999999e-123  Shewanella sp. MR-7  Bacteria  normal  0.0570245  normal 
 
 
-
 
NC_004347  SO_2086  phenylalanyl-tRNA synthetase subunit beta  33.79 
 
 
795 aa  437  1e-121  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1829  phenylalanyl-tRNA synthetase subunit beta  34.03 
 
 
795 aa  436  1e-121  Shewanella putrefaciens CN-32  Bacteria  unclonable  0.00000186413  n/a   
 
 
-
 
NC_009665  Shew185_1901  phenylalanyl-tRNA synthetase subunit beta  33.91 
 
 
795 aa  438  1e-121  Shewanella baltica OS185  Bacteria  hitchhiker  0.00294003  n/a   
 
 
-
 
NC_011663  Sbal223_2418  phenylalanyl-tRNA synthetase subunit beta  33.91 
 
 
795 aa  438  1e-121  Shewanella baltica OS223  Bacteria  decreased coverage  0.000318266  hitchhiker  0.0000890505 
 
 
-
 
NC_009997  Sbal195_1908  phenylalanyl-tRNA synthetase subunit beta  33.66 
 
 
795 aa  437  1e-121  Shewanella baltica OS195  Bacteria  hitchhiker  0.00255913  normal 
 
 
-
 
NC_009052  Sbal_1874  phenylalanyl-tRNA synthetase subunit beta  33.66 
 
 
795 aa  436  1e-121  Shewanella baltica OS155  Bacteria  decreased coverage  0.000755096  n/a   
 
 
-
 
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