More than 300 homologs were found in PanDaTox collection
for query gene Svir_30030 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_30030  drug resistance transporter, EmrB/QacA subfamily  100 
 
 
487 aa  930    Saccharomonospora viridis DSM 43017  Bacteria  decreased coverage  0.00171806  normal 
 
 
-
 
NC_014210  Ndas_2424  drug resistance transporter, EmrB/QacA subfamily  51.53 
 
 
496 aa  461  1e-129  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.153591 
 
 
-
 
NC_013521  Sked_06270  drug resistance transporter, EmrB/QacA subfamily  52.07 
 
 
490 aa  437  1e-121  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0268  drug resistance transporter, EmrB/QacA subfamily  52.62 
 
 
500 aa  434  1e-120  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0312698  decreased coverage  0.00157172 
 
 
-
 
NC_012669  Bcav_0845  drug resistance transporter, EmrB/QacA subfamily  52.42 
 
 
489 aa  397  1e-109  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.222515  normal  0.167552 
 
 
-
 
NC_008541  Arth_0161  EmrB/QacA family drug resistance transporter  48.55 
 
 
494 aa  393  1e-108  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0326  drug resistance transporter, EmrB/QacA subfamily  47.05 
 
 
490 aa  390  1e-107  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014151  Cfla_1298  drug resistance transporter, EmrB/QacA subfamily  53.1 
 
 
500 aa  385  1e-106  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.000893352  hitchhiker  0.00471574 
 
 
-
 
NC_013172  Bfae_05820  drug resistance transporter, EmrB/QacA subfamily  46.95 
 
 
510 aa  374  1e-102  Brachybacterium faecium DSM 4810  Bacteria  normal  0.835158  n/a   
 
 
-
 
NC_013947  Snas_5520  drug resistance transporter, EmrB/QacA subfamily  49.8 
 
 
502 aa  374  1e-102  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3361  drug resistance transporter, EmrB/QacA subfamily  48.12 
 
 
492 aa  359  5e-98  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_02600  drug resistance transporter, EmrB/QacA subfamily  47.22 
 
 
505 aa  358  9e-98  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1459  EmrB/QacA family drug resistance transporter  44.07 
 
 
483 aa  354  2e-96  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.257317  n/a   
 
 
-
 
NC_011658  BCAH187_A1003  lincomycin resistance protein LmrB  40.43 
 
 
480 aa  343  5e-93  Bacillus cereus AH187  Bacteria  normal  0.2001  n/a   
 
 
-
 
NC_006274  BCZK0734  lincomycin resistance protein  40.43 
 
 
480 aa  342  8e-93  Bacillus cereus E33L  Bacteria  normal  0.498733  n/a   
 
 
-
 
NC_014158  Tpau_3099  drug resistance transporter, EmrB/QacA subfamily  45.95 
 
 
491 aa  338  1.9999999999999998e-91  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0959  permease, general substrate transporter  39.75 
 
 
482 aa  326  7e-88  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0281229  n/a   
 
 
-
 
NC_005945  BAS0971  EmrB/QacA family drug resistance transporter  39.92 
 
 
482 aa  325  1e-87  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1038  EmrB/QacA family drug resistance transporter  39.92 
 
 
482 aa  325  1e-87  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1116  drug resistance transporter, EmrB/QacA family  39.34 
 
 
482 aa  321  1.9999999999999998e-86  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000271146 
 
 
-
 
NC_006274  BCZK0949  permease, general substrate transporter  39.34 
 
 
482 aa  320  3.9999999999999996e-86  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000025972  n/a   
 
 
-
 
NC_013169  Ksed_14700  drug resistance transporter, EmrB/QacA subfamily  45.89 
 
 
491 aa  312  7.999999999999999e-84  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0438074  normal  0.116411 
 
 
-
 
NC_013205  Aaci_2909  drug resistance transporter, EmrB/QacA subfamily  40 
 
 
635 aa  306  6e-82  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000610887  n/a   
 
 
-
 
NC_011773  BCAH820_1028  drug resistance transporter, EmrB/QacA family  38.59 
 
 
491 aa  303  4.0000000000000003e-81  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.10576e-22 
 
 
-
 
NC_011658  BCAH187_A1115  drug resistance transporter, EmrB/QacA family  38.9 
 
 
491 aa  303  7.000000000000001e-81  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0888  EmrB/QacA family drug resistance transporter  38.38 
 
 
486 aa  302  1e-80  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0944  EmrB/QacA family drug resistance transporter  38.38 
 
 
486 aa  302  1e-80  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4325  drug resistance transporter, EmrB/QacA family  37.78 
 
 
491 aa  301  3e-80  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0845  EmrB/QacA family drug resistance transporter  37.58 
 
 
491 aa  298  2e-79  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0988  drug resistance transporter, EmrB/QacA family  37.24 
 
 
491 aa  296  4e-79  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1468  EmrB/QacA family drug resistance transporter  36.03 
 
 
491 aa  293  6e-78  Psychrobacter sp. PRwf-1  Bacteria  normal  0.986472  normal  0.151461 
 
 
-
 
NC_012793  GWCH70_1833  drug resistance transporter, EmrB/QacA subfamily  37.1 
 
 
564 aa  293  6e-78  Geobacillus sp. WCH70  Bacteria  normal  0.0281974  n/a   
 
 
-
 
NC_013411  GYMC61_2448  drug resistance transporter, EmrB/QacA subfamily  37.65 
 
 
570 aa  292  1e-77  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A3232  drug resistance transporter, EmrB/QacA family  37.37 
 
 
513 aa  286  5.999999999999999e-76  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2014  drug resistance transporter, EmrB/QacA family  36.64 
 
 
513 aa  286  5.999999999999999e-76  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_2982  multidrug resistance protein B  36.96 
 
 
492 aa  285  2.0000000000000002e-75  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3230  drug resistance transporter, EmrB/QacA family  36.96 
 
 
492 aa  284  3.0000000000000004e-75  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008528  OEOE_0877  major facilitator superfamily permease  33.87 
 
 
496 aa  284  3.0000000000000004e-75  Oenococcus oeni PSU-1  Bacteria  normal  0.192576  n/a   
 
 
-
 
NC_006274  BCZK2922  multidrug resistance protein B  36.96 
 
 
492 aa  282  9e-75  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2994  EmrB/QacA family drug resistance transporter  36.96 
 
 
492 aa  281  2e-74  Bacillus anthracis str. Sterne  Bacteria  normal  0.218586  n/a   
 
 
-
 
NC_007530  GBAA_3223  EmrB/QacA family drug resistance transporter  36.96 
 
 
492 aa  281  2e-74  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0356226  n/a   
 
 
-
 
NC_011658  BCAH187_A3251  drug resistance transporter, EmrB/QacA family  37.06 
 
 
492 aa  281  2e-74  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3240  EmrB/QacA family drug resistance transporter  36.76 
 
 
492 aa  280  5e-74  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3194  EmrB/QacA family drug resistance transporter  38.57 
 
 
484 aa  280  6e-74  Bacillus cereus ATCC 10987  Bacteria  normal  0.794509  n/a   
 
 
-
 
NC_002976  SERP2340  EmrB/QacA family drug resistance transporter  33.62 
 
 
472 aa  278  1e-73  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2937  EmrB/QacA family drug resistance transporter  36.03 
 
 
492 aa  278  1e-73  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.486174  n/a   
 
 
-
 
NC_009632  SaurJH1_2488  EmrB/QacA family drug resistance transporter  35.63 
 
 
479 aa  278  2e-73  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2440  EmrB/QacA family drug resistance transporter  35.63 
 
 
479 aa  278  2e-73  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2739  EmrB/QacA family drug resistance transporter  37.06 
 
 
482 aa  277  3e-73  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.00000169232  n/a   
 
 
-
 
NC_013205  Aaci_2428  drug resistance transporter, EmrB/QacA subfamily  39.51 
 
 
561 aa  276  6e-73  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0683901  n/a   
 
 
-
 
NC_013204  Elen_2489  drug resistance transporter, EmrB/QacA subfamily  37.29 
 
 
657 aa  275  2.0000000000000002e-72  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_22510  drug resistance transporter, EmrB/QacA subfamily  35.43 
 
 
494 aa  272  1e-71  Brachybacterium faecium DSM 4810  Bacteria  normal  0.319093  n/a   
 
 
-
 
NC_002976  SERP1944  EmrB/QacA family drug resistance transporter  31.75 
 
 
658 aa  270  5e-71  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1519  EmrB/QacA family drug resistance transporter  33.4 
 
 
502 aa  265  1e-69  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0561  drug resistance transporter, EmrB/QacA family  35.76 
 
 
599 aa  263  4.999999999999999e-69  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000151463  hitchhiker  0.00000000000000678179 
 
 
-
 
NC_010184  BcerKBAB4_4399  EmrB/QacA family drug resistance transporter  37.78 
 
 
597 aa  263  6e-69  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00696651  n/a   
 
 
-
 
NC_009632  SaurJH1_2422  EmrB/QacA family drug resistance transporter  32.93 
 
 
643 aa  263  6.999999999999999e-69  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.845412  n/a   
 
 
-
 
NC_009487  SaurJH9_2376  EmrB/QacA family drug resistance transporter  32.93 
 
 
643 aa  263  6.999999999999999e-69  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4699  EmrB/QacA family drug resistance transporter  35.54 
 
 
599 aa  262  1e-68  Bacillus cereus ATCC 10987  Bacteria  normal  0.0449963  n/a   
 
 
-
 
NC_009674  Bcer98_3254  EmrB/QacA family drug resistance transporter  37.32 
 
 
579 aa  261  1e-68  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0725  major facilitator superfamily permease  31.85 
 
 
490 aa  261  3e-68  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal  0.29773 
 
 
-
 
NC_005945  BAS4464  EmrB/QacA family drug resistance transporter  37.44 
 
 
599 aa  258  2e-67  Bacillus anthracis str. Sterne  Bacteria  normal  0.737474  n/a   
 
 
-
 
NC_006274  BCZK4310  multidrug resistance protein B  37.44 
 
 
599 aa  258  2e-67  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4683  drug resistance transporter, EmrB/QacA family  37.44 
 
 
599 aa  258  2e-67  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.74665e-44 
 
 
-
 
NC_007530  GBAA_4812  EmrB/QacA family drug resistance transporter  37.44 
 
 
599 aa  258  2e-67  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.127812  n/a   
 
 
-
 
NC_011658  BCAH187_A4692  drug resistance transporter, EmrB/QacA family  37.19 
 
 
599 aa  258  2e-67  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000143582  n/a   
 
 
-
 
NC_005957  BT9727_4299  multidrug resistance protein B  37.19 
 
 
599 aa  257  3e-67  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.649426  n/a   
 
 
-
 
NC_011725  BCB4264_A4676  drug resistance transporter, EmrB/QacA family  37.19 
 
 
599 aa  257  3e-67  Bacillus cereus B4264  Bacteria  hitchhiker  0.00195609  n/a   
 
 
-
 
NC_008531  LEUM_1863  major facilitator superfamily permease  33.94 
 
 
465 aa  253  6e-66  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.0147099  n/a   
 
 
-
 
NC_002976  SERP1766  EmrB/QacA family drug resistance transporter  31.99 
 
 
479 aa  250  4e-65  Staphylococcus epidermidis RP62A  Bacteria  normal  0.239731  n/a   
 
 
-
 
NC_009632  SaurJH1_2236  EmrB/QacA family drug resistance transporter  33.05 
 
 
481 aa  247  3e-64  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.126562  n/a   
 
 
-
 
NC_009487  SaurJH9_2198  EmrB/QacA family drug resistance transporter  33.05 
 
 
481 aa  247  3e-64  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.0460557  n/a   
 
 
-
 
NC_010816  BLD_0659  permease of the major facilitator superfamily  35.03 
 
 
683 aa  244  1.9999999999999999e-63  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1318  EmrB/QacA family drug resistance transporter  36.26 
 
 
465 aa  236  9e-61  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1423  major facilitator superfamily permease  35.06 
 
 
464 aa  233  7.000000000000001e-60  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.904673  hitchhiker  0.0000661431 
 
 
-
 
NC_013170  Ccur_11090  drug resistance transporter, EmrB/QacA subfamily  34.88 
 
 
640 aa  231  2e-59  Cryptobacterium curtum DSM 15641  Bacteria  decreased coverage  0.000431734  normal 
 
 
-
 
NC_011830  Dhaf_1686  drug resistance transporter, EmrB/QacA subfamily  32.26 
 
 
620 aa  218  2e-55  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.892029  n/a   
 
 
-
 
NC_013721  HMPREF0424_0354  drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family protein  32.51 
 
 
542 aa  214  2.9999999999999995e-54  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0998  putative permease  33.77 
 
 
548 aa  208  2e-52  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0290  major facilitator superfamily permease  32.07 
 
 
463 aa  208  2e-52  Oenococcus oeni PSU-1  Bacteria  normal  0.146864  n/a   
 
 
-
 
NC_008528  OEOE_1853  major facilitator superfamily permease  32.22 
 
 
471 aa  206  9e-52  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0425  drug resistance transporter, EmrB/QacA subfamily  30.37 
 
 
485 aa  204  4e-51  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG1707  EmrB/QacA family drug resistance transporter  30.85 
 
 
499 aa  201  3e-50  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.00395265  n/a   
 
 
-
 
NC_009513  Lreu_0360  major facilitator transporter  32.07 
 
 
461 aa  200  3.9999999999999996e-50  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_08630  drug resistance transporter, EmrB/QacA subfamily  30.18 
 
 
509 aa  199  7e-50  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal  0.315329 
 
 
-
 
NC_009972  Haur_2761  EmrB/QacA family drug resistance transporter  28.54 
 
 
545 aa  193  6e-48  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.00000648651  n/a   
 
 
-
 
NC_009513  Lreu_1299  major facilitator transporter  30.67 
 
 
479 aa  191  2e-47  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1471  major facilitator superfamily permease  35.55 
 
 
454 aa  191  2e-47  Lactococcus lactis subsp. cremoris SK11  Bacteria  decreased coverage  0.00462633  n/a   
 
 
-
 
NC_013204  Elen_2667  drug resistance transporter, EmrB/QacA subfamily  29.98 
 
 
485 aa  190  4e-47  Eggerthella lenta DSM 2243  Bacteria  normal  0.0905281  normal  0.424193 
 
 
-
 
NC_008527  LACR_1383  major facilitator superfamily permease  30.91 
 
 
519 aa  190  5.999999999999999e-47  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.601618  n/a   
 
 
-
 
NC_009513  Lreu_0947  EmrB/QacA family drug resistance transporter  29.95 
 
 
462 aa  189  1e-46  Lactobacillus reuteri DSM 20016  Bacteria  decreased coverage  0.000000000410718  n/a   
 
 
-
 
NC_013165  Shel_23660  drug resistance transporter, EmrB/QacA subfamily  31.02 
 
 
461 aa  188  2e-46  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.629317  normal  0.503051 
 
 
-
 
NC_008531  LEUM_0963  major facilitator superfamily permease  30.13 
 
 
449 aa  188  2e-46  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.337437  n/a   
 
 
-
 
NC_008531  LEUM_0546  major facilitator superfamily permease  32.68 
 
 
448 aa  186  6e-46  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.000674821  n/a   
 
 
-
 
NC_008531  LEUM_1880  major facilitator superfamily permease  30.88 
 
 
503 aa  186  7e-46  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0280  major facilitator transporter  29.06 
 
 
466 aa  185  1.0000000000000001e-45  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.0000000040332  n/a   
 
 
-
 
NC_008527  LACR_1628  major facilitator superfamily permease  29.76 
 
 
457 aa  183  7e-45  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.139658  n/a   
 
 
-
 
NC_009972  Haur_1415  EmrB/QacA family drug resistance transporter  30.22 
 
 
475 aa  182  1e-44  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.00176967  n/a   
 
 
-
 
NC_008528  OEOE_1378  major facilitator superfamily permease  30.42 
 
 
512 aa  182  1e-44  Oenococcus oeni PSU-1  Bacteria  normal  0.0602023  n/a   
 
 
-
 
NC_009921  Franean1_3660  EmrB/QacA family drug resistance transporter  33.57 
 
 
558 aa  180  4.999999999999999e-44  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
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