More than 300 homologs were found in PanDaTox collection
for query gene Svir_16350 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  100 
 
 
307 aa  613  9.999999999999999e-175  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  53.85 
 
 
336 aa  311  1e-83  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  52.55 
 
 
409 aa  300  2e-80  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  53.57 
 
 
306 aa  297  2e-79  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  54.39 
 
 
311 aa  295  5e-79  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  54.39 
 
 
311 aa  295  7e-79  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  54.39 
 
 
311 aa  295  7e-79  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  56.08 
 
 
424 aa  288  6e-77  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  50.51 
 
 
320 aa  281  8.000000000000001e-75  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  48.82 
 
 
326 aa  275  9e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  46.84 
 
 
463 aa  269  5e-71  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  50 
 
 
404 aa  267  1e-70  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  47.06 
 
 
307 aa  260  3e-68  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  48.87 
 
 
394 aa  259  4e-68  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  53.28 
 
 
466 aa  256  3e-67  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  48.77 
 
 
407 aa  252  4.0000000000000004e-66  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  42.26 
 
 
393 aa  228  1e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  41.61 
 
 
404 aa  210  3e-53  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  39.1 
 
 
509 aa  203  3e-51  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  36.42 
 
 
497 aa  196  4.0000000000000005e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  39.86 
 
 
504 aa  189  7e-47  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  43.18 
 
 
434 aa  188  1e-46  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  40.93 
 
 
434 aa  188  1e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  39.13 
 
 
390 aa  187  1e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  39.42 
 
 
505 aa  184  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  44.72 
 
 
296 aa  182  7e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  40.94 
 
 
313 aa  180  2.9999999999999997e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  41.37 
 
 
512 aa  179  4e-44  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  36.7 
 
 
453 aa  176  5e-43  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  39.74 
 
 
486 aa  175  9.999999999999999e-43  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  39.42 
 
 
303 aa  173  2.9999999999999996e-42  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  37.11 
 
 
521 aa  172  6.999999999999999e-42  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  40.15 
 
 
573 aa  171  1e-41  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  40.14 
 
 
491 aa  170  3e-41  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  35.23 
 
 
478 aa  164  2.0000000000000002e-39  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  36.57 
 
 
489 aa  162  9e-39  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  37.67 
 
 
545 aa  161  1e-38  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  38.29 
 
 
481 aa  160  2e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  39.44 
 
 
625 aa  160  2e-38  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  36.51 
 
 
414 aa  159  7e-38  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  35.28 
 
 
567 aa  158  1e-37  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  40.7 
 
 
363 aa  156  3e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  35.46 
 
 
549 aa  155  6e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  34.67 
 
 
362 aa  155  7e-37  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  36.39 
 
 
420 aa  155  8e-37  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  34.44 
 
 
481 aa  155  1e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  35.11 
 
 
468 aa  153  2.9999999999999998e-36  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  35.58 
 
 
560 aa  152  8e-36  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  31.55 
 
 
618 aa  151  2e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  34.81 
 
 
538 aa  149  5e-35  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  33.44 
 
 
480 aa  149  7e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  31.95 
 
 
468 aa  148  1.0000000000000001e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  37.06 
 
 
349 aa  148  1.0000000000000001e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  33.12 
 
 
506 aa  147  2.0000000000000003e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  31.8 
 
 
400 aa  147  2.0000000000000003e-34  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  35.15 
 
 
374 aa  146  3e-34  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  34.42 
 
 
493 aa  147  3e-34  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  30.89 
 
 
530 aa  146  4.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  34.35 
 
 
382 aa  146  5e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  34.29 
 
 
619 aa  142  8e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  35.69 
 
 
490 aa  141  9.999999999999999e-33  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  35.69 
 
 
490 aa  141  9.999999999999999e-33  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  33.66 
 
 
493 aa  141  9.999999999999999e-33  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  34.31 
 
 
497 aa  140  1.9999999999999998e-32  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  33.44 
 
 
584 aa  140  1.9999999999999998e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  35.69 
 
 
490 aa  141  1.9999999999999998e-32  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  35.27 
 
 
443 aa  139  3.9999999999999997e-32  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  36.84 
 
 
520 aa  139  7.999999999999999e-32  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  33.77 
 
 
676 aa  139  8.999999999999999e-32  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  31.66 
 
 
522 aa  138  1e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  39.42 
 
 
490 aa  138  1e-31  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  34.47 
 
 
732 aa  138  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  32.59 
 
 
379 aa  138  1e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  33.1 
 
 
465 aa  137  2e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  34.59 
 
 
419 aa  137  2e-31  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  35.71 
 
 
517 aa  136  4e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  36.67 
 
 
551 aa  134  1.9999999999999998e-30  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  33.33 
 
 
512 aa  134  3e-30  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  37.82 
 
 
381 aa  133  3.9999999999999996e-30  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  32.99 
 
 
516 aa  131  1.0000000000000001e-29  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  35.14 
 
 
432 aa  131  1.0000000000000001e-29  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  37.1 
 
 
377 aa  131  1.0000000000000001e-29  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  31.18 
 
 
365 aa  131  2.0000000000000002e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  35.96 
 
 
319 aa  130  2.0000000000000002e-29  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  31.65 
 
 
417 aa  131  2.0000000000000002e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  33.77 
 
 
410 aa  129  4.0000000000000003e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  39.38 
 
 
405 aa  129  7.000000000000001e-29  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  35.45 
 
 
563 aa  128  1.0000000000000001e-28  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_009921  Franean1_5903  cell envelope-related transcriptional attenuator  34.26 
 
 
508 aa  126  4.0000000000000003e-28  Frankia sp. EAN1pec  Bacteria  normal  normal  0.667474 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  31.68 
 
 
520 aa  126  5e-28  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  32.07 
 
 
442 aa  125  8.000000000000001e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  32.82 
 
 
414 aa  125  8.000000000000001e-28  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  34.63 
 
 
453 aa  125  9e-28  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  39.55 
 
 
495 aa  125  9e-28  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  33.61 
 
 
403 aa  123  4e-27  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  30.65 
 
 
445 aa  123  5e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  34.03 
 
 
380 aa  122  6e-27  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  36.62 
 
 
358 aa  122  8e-27  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  32.87 
 
 
395 aa  122  9e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  31.12 
 
 
699 aa  121  9.999999999999999e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
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