More than 300 homologs were found in PanDaTox collection
for query gene Svir_06070 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  100 
 
 
514 aa  1030    Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  55.02 
 
 
410 aa  349  8e-95  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  45.67 
 
 
522 aa  310  5e-83  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  48.73 
 
 
676 aa  293  6e-78  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  43.11 
 
 
567 aa  283  4.0000000000000003e-75  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  46.49 
 
 
732 aa  283  7.000000000000001e-75  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  42.37 
 
 
493 aa  279  8e-74  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  43.68 
 
 
497 aa  277  4e-73  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  42.11 
 
 
493 aa  275  2.0000000000000002e-72  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  44.08 
 
 
490 aa  274  3e-72  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  44.08 
 
 
490 aa  274  3e-72  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  44.08 
 
 
490 aa  274  3e-72  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  46.73 
 
 
496 aa  266  8e-70  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  43.89 
 
 
517 aa  260  3e-68  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  41.22 
 
 
538 aa  256  8e-67  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_009565  TBFG_13519  hypothetical protein  42.72 
 
 
512 aa  234  4.0000000000000004e-60  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.100718 
 
 
-
 
NC_014158  Tpau_1296  cell envelope-related transcriptional attenuator  40.63 
 
 
414 aa  228  2e-58  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  38.66 
 
 
521 aa  202  9.999999999999999e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_013131  Caci_8771  cell envelope-related transcriptional attenuator  34.53 
 
 
547 aa  197  6e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.359858 
 
 
-
 
NC_013131  Caci_1912  cell envelope-related transcriptional attenuator  32.87 
 
 
664 aa  195  1e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7119  cell envelope-related transcriptional attenuator  43.12 
 
 
382 aa  187  6e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1299  cell envelope-related transcriptional attenuator  37 
 
 
340 aa  177  3e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  31.48 
 
 
497 aa  168  2e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  37.26 
 
 
491 aa  154  2.9999999999999998e-36  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  31.43 
 
 
512 aa  151  3e-35  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  33.66 
 
 
390 aa  151  3e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  28.99 
 
 
509 aa  149  1.0000000000000001e-34  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  36.3 
 
 
468 aa  141  1.9999999999999998e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  32.67 
 
 
520 aa  141  3e-32  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  29.51 
 
 
505 aa  136  9.999999999999999e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  31.52 
 
 
530 aa  135  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  33 
 
 
486 aa  134  3e-30  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  31.18 
 
 
504 aa  132  1.0000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  29.66 
 
 
618 aa  132  1.0000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  32.14 
 
 
625 aa  132  2.0000000000000002e-29  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  30.43 
 
 
414 aa  131  4.0000000000000003e-29  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  35.55 
 
 
320 aa  129  1.0000000000000001e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  32.35 
 
 
466 aa  127  5e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  30.47 
 
 
540 aa  126  9e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  32.29 
 
 
545 aa  125  1e-27  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  30.65 
 
 
420 aa  124  4e-27  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_09620  cell envelope-related function transcriptional attenuator common domain protein  34.94 
 
 
353 aa  122  9.999999999999999e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.369888 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  33.21 
 
 
394 aa  122  9.999999999999999e-27  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  30.07 
 
 
560 aa  122  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  30.32 
 
 
549 aa  122  1.9999999999999998e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  30.17 
 
 
326 aa  121  3.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  33.99 
 
 
404 aa  121  3.9999999999999996e-26  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  31.31 
 
 
481 aa  121  3.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  28.74 
 
 
573 aa  120  4.9999999999999996e-26  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  28.28 
 
 
362 aa  120  7.999999999999999e-26  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  33.11 
 
 
336 aa  119  9.999999999999999e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  31.03 
 
 
481 aa  119  9.999999999999999e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  30.47 
 
 
400 aa  118  1.9999999999999998e-25  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  30 
 
 
406 aa  119  1.9999999999999998e-25  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  30.45 
 
 
434 aa  118  3e-25  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  32.86 
 
 
307 aa  118  3e-25  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  30.94 
 
 
407 aa  117  6.9999999999999995e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  31.9 
 
 
307 aa  116  1.0000000000000001e-24  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  28.32 
 
 
734 aa  115  2.0000000000000002e-24  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  28.82 
 
 
432 aa  113  8.000000000000001e-24  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  30.11 
 
 
395 aa  113  9e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  30.03 
 
 
417 aa  113  1.0000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  30.54 
 
 
424 aa  112  2.0000000000000002e-23  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  30.54 
 
 
516 aa  112  2.0000000000000002e-23  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  28.66 
 
 
349 aa  111  3e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  32.53 
 
 
463 aa  111  4.0000000000000004e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  32.09 
 
 
468 aa  109  9.000000000000001e-23  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  30.65 
 
 
311 aa  108  2e-22  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  30.65 
 
 
311 aa  108  2e-22  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  29.62 
 
 
311 aa  108  2e-22  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  29.56 
 
 
393 aa  108  3e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  30.49 
 
 
379 aa  108  3e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  28.4 
 
 
520 aa  108  3e-22  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  29.59 
 
 
506 aa  107  4e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  29.46 
 
 
442 aa  107  4e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  27.67 
 
 
584 aa  107  4e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  28.48 
 
 
453 aa  107  5e-22  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  28.72 
 
 
489 aa  107  6e-22  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  28.15 
 
 
684 aa  107  7e-22  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  31.99 
 
 
409 aa  106  9e-22  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  29.38 
 
 
377 aa  106  1e-21  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_013093  Amir_3559  cell envelope-related transcriptional attenuator  33.48 
 
 
352 aa  105  3e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  0.153801  n/a   
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  26.03 
 
 
382 aa  103  7e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  27.46 
 
 
521 aa  103  7e-21  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  31.17 
 
 
526 aa  102  1e-20  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  30.53 
 
 
487 aa  102  1e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  30.67 
 
 
306 aa  103  1e-20  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  29.25 
 
 
374 aa  102  2e-20  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  26.55 
 
 
404 aa  102  2e-20  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  31.46 
 
 
619 aa  101  3e-20  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  26.49 
 
 
478 aa  101  3e-20  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  32.89 
 
 
499 aa  101  3e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  31.68 
 
 
643 aa  99  2e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  30.38 
 
 
303 aa  98.2  3e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  29.23 
 
 
381 aa  96.7  1e-18  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  28.28 
 
 
363 aa  95.9  2e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  27.51 
 
 
391 aa  95.1  3e-18  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  26.57 
 
 
434 aa  94.4  5e-18  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_014151  Cfla_3214  cell envelope-related transcriptional attenuator  30.9 
 
 
443 aa  92  2e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00000235319 
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  27.51 
 
 
649 aa  92  2e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>