More than 300 homologs were found in PanDaTox collection
for query gene Svir_00210 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  100 
 
 
221 aa  439  9.999999999999999e-123  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  49.77 
 
 
239 aa  198  3.9999999999999996e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  56.68 
 
 
224 aa  197  1.0000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  45.85 
 
 
219 aa  186  3e-46  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  46.76 
 
 
225 aa  182  3e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  46.79 
 
 
223 aa  182  3e-45  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  46.79 
 
 
222 aa  182  4.0000000000000006e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  47.22 
 
 
218 aa  181  6e-45  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  45.58 
 
 
216 aa  181  9.000000000000001e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  43.67 
 
 
228 aa  180  1e-44  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  44.95 
 
 
224 aa  180  2e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  45.37 
 
 
218 aa  180  2e-44  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  46.33 
 
 
217 aa  179  4e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  48.13 
 
 
218 aa  178  4.999999999999999e-44  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  49.78 
 
 
225 aa  178  5.999999999999999e-44  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  48.15 
 
 
209 aa  177  9e-44  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  46.82 
 
 
222 aa  176  2e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  45.41 
 
 
224 aa  176  3e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  45.83 
 
 
221 aa  175  4e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  47.32 
 
 
225 aa  176  4e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  46.79 
 
 
224 aa  175  5e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  44.29 
 
 
226 aa  174  8e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  44.05 
 
 
231 aa  174  9.999999999999999e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  46.05 
 
 
213 aa  172  3.9999999999999995e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  45 
 
 
225 aa  172  3.9999999999999995e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  45.25 
 
 
211 aa  172  5e-42  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.84 
 
 
226 aa  171  5.999999999999999e-42  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  46.54 
 
 
215 aa  171  5.999999999999999e-42  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  44.7 
 
 
222 aa  171  5.999999999999999e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  46.46 
 
 
228 aa  171  6.999999999999999e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013131  Caci_0637  two component transcriptional regulator, LuxR family  52.05 
 
 
229 aa  171  7.999999999999999e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.565019 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  46.58 
 
 
218 aa  171  7.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  41.67 
 
 
222 aa  171  9e-42  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  45.05 
 
 
225 aa  171  9e-42  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  45 
 
 
209 aa  171  9e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  49.54 
 
 
220 aa  170  1e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  48.39 
 
 
227 aa  171  1e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_014158  Tpau_1989  two component transcriptional regulator, LuxR family  52.56 
 
 
229 aa  171  1e-41  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  43.78 
 
 
234 aa  170  1e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  46.51 
 
 
221 aa  170  2e-41  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  45.87 
 
 
219 aa  170  2e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  42.27 
 
 
220 aa  169  3e-41  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  46.3 
 
 
220 aa  169  4e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  47.69 
 
 
221 aa  169  4e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  45.41 
 
 
219 aa  169  4e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  47.27 
 
 
226 aa  168  5e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  44.86 
 
 
217 aa  168  6e-41  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  45.5 
 
 
212 aa  168  7e-41  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  45.41 
 
 
224 aa  167  8e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  44.29 
 
 
219 aa  167  8e-41  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  43.78 
 
 
217 aa  167  8e-41  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  43.78 
 
 
228 aa  167  1e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  45.41 
 
 
234 aa  167  1e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  46.51 
 
 
234 aa  167  2e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  41.15 
 
 
250 aa  167  2e-40  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  45.12 
 
 
208 aa  166  2e-40  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  44.09 
 
 
225 aa  166  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  45.05 
 
 
227 aa  167  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  44.44 
 
 
226 aa  167  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  43.5 
 
 
231 aa  166  2.9999999999999998e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  46.26 
 
 
211 aa  165  4e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  45.7 
 
 
234 aa  165  4e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  45.66 
 
 
219 aa  166  4e-40  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  42.79 
 
 
206 aa  165  4e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  47.66 
 
 
212 aa  166  4e-40  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0747  two component transcriptional regulator, LuxR family  34.5 
 
 
232 aa  165  5e-40  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.643618  normal  0.38139 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  44.14 
 
 
228 aa  165  5e-40  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  44.64 
 
 
229 aa  165  5.9999999999999996e-40  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  46.61 
 
 
226 aa  165  5.9999999999999996e-40  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  45.58 
 
 
215 aa  165  5.9999999999999996e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  45.66 
 
 
221 aa  164  6.9999999999999995e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  41.47 
 
 
209 aa  164  6.9999999999999995e-40  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  47.22 
 
 
207 aa  164  6.9999999999999995e-40  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  41.47 
 
 
210 aa  164  8e-40  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.09 
 
 
226 aa  164  8e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2145  two component transcriptional regulator, LuxR family  47.85 
 
 
220 aa  164  8e-40  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0196231  n/a   
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  43.12 
 
 
232 aa  164  9e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  42.01 
 
 
230 aa  164  9e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  44.14 
 
 
234 aa  164  9e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  42.92 
 
 
224 aa  164  1.0000000000000001e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  44.29 
 
 
222 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  42.47 
 
 
223 aa  164  1.0000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  46.82 
 
 
227 aa  164  1.0000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  44.75 
 
 
220 aa  164  1.0000000000000001e-39  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  46.58 
 
 
220 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  44.24 
 
 
217 aa  164  1.0000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  45.45 
 
 
224 aa  163  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  44.2 
 
 
224 aa  163  2.0000000000000002e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  42.79 
 
 
214 aa  163  2.0000000000000002e-39  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.09 
 
 
229 aa  163  2.0000000000000002e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  44.95 
 
 
225 aa  163  2.0000000000000002e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013131  Caci_5428  two component transcriptional regulator, LuxR family  54.33 
 
 
201 aa  163  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.358603 
 
 
-
 
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  44.04 
 
 
221 aa  163  2.0000000000000002e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  41.28 
 
 
234 aa  162  3e-39  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  44.84 
 
 
241 aa  162  3e-39  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  43.38 
 
 
215 aa  162  3e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  45.87 
 
 
222 aa  162  3e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  45.05 
 
 
221 aa  162  3e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  47.44 
 
 
212 aa  162  4.0000000000000004e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  44.34 
 
 
213 aa  162  4.0000000000000004e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
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