More than 300 homologs were found in PanDaTox collection
for query gene Suden_1178 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_1178  methyl-accepting chemotaxis sensory transducer  100 
 
 
530 aa  1059    Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1434  chemotaxis sensory transducer  32.03 
 
 
530 aa  265  2e-69  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1826  chemotaxis sensory transducer  39.89 
 
 
650 aa  241  2.9999999999999997e-62  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1039  protease htpx  37.96 
 
 
656 aa  238  1e-61  Campylobacter concisus 13826  Bacteria  normal  0.0758551  n/a   
 
 
-
 
NC_013512  Sdel_2141  chemotaxis sensory transducer  40.62 
 
 
708 aa  236  1.0000000000000001e-60  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1331  methyl-accepting chemotaxis sensory transducer  39.4 
 
 
563 aa  234  3e-60  Campylobacter curvus 525.92  Bacteria  normal  0.158014  n/a   
 
 
-
 
NC_009802  CCC13826_0840  cache domain-contain protein  38.71 
 
 
566 aa  228  2e-58  Campylobacter concisus 13826  Bacteria  normal  0.287851  n/a   
 
 
-
 
NC_013512  Sdel_0112  chemotaxis sensory transducer  39.64 
 
 
563 aa  227  5.0000000000000005e-58  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1205  chemotaxis sensory transducer  37.64 
 
 
713 aa  221  3e-56  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0113  chemotaxis sensory transducer  37.82 
 
 
563 aa  220  3.9999999999999997e-56  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1932  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
682 aa  216  7e-55  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0262  chemotaxis sensory transducer  38.1 
 
 
650 aa  214  3.9999999999999995e-54  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0562  putative methyl-accepting chemotaxis protein  29.69 
 
 
530 aa  213  9e-54  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.191806  n/a   
 
 
-
 
NC_013512  Sdel_1432  chemotaxis sensory transducer  37.6 
 
 
546 aa  212  1e-53  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.138665  n/a   
 
 
-
 
NC_013512  Sdel_0631  chemotaxis sensory transducer  35.79 
 
 
656 aa  211  2e-53  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00821954  n/a   
 
 
-
 
NC_012039  Cla_0544  MCP-domain signal transduction protein  29.46 
 
 
530 aa  206  7e-52  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0988  methyl-accepting chemotaxis sensory transducer  35.99 
 
 
652 aa  204  2e-51  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0819  chemotaxis sensory transducer  34.37 
 
 
627 aa  192  1e-47  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.113637  n/a   
 
 
-
 
NC_013512  Sdel_1930  chemotaxis sensory transducer  34.37 
 
 
625 aa  191  2e-47  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1854  chemotaxis sensory transducer  40.51 
 
 
536 aa  191  2.9999999999999997e-47  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1073  chemotaxis sensory transducer  36.06 
 
 
633 aa  191  4e-47  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00919731  n/a   
 
 
-
 
NC_013512  Sdel_1931  chemotaxis sensory transducer  33.24 
 
 
621 aa  189  2e-46  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0975  membrane protein, putative, degenerate  26.94 
 
 
530 aa  184  4.0000000000000006e-45  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1860  chemotaxis sensory transducer  32.47 
 
 
533 aa  165  2.0000000000000002e-39  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00521087  n/a   
 
 
-
 
NC_009715  CCV52592_2035  putative transducer  36.09 
 
 
626 aa  164  4.0000000000000004e-39  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1286  methyl-accepting chemotaxis sensory transducer  30.07 
 
 
538 aa  155  1e-36  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  26.51 
 
 
541 aa  153  8e-36  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  26.64 
 
 
528 aa  149  8e-35  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_009457  VC0395_A0916  methyl-accepting chemotaxis protein  26.41 
 
 
543 aa  148  2.0000000000000003e-34  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000029497  n/a   
 
 
-
 
NC_008787  CJJ81176_0046  methyl-accepting chemotaxis protein  36.16 
 
 
584 aa  145  2e-33  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0019  methyl-accepting chemotaxis protein  36.16 
 
 
593 aa  144  3e-33  Campylobacter jejuni RM1221  Bacteria  normal  0.314472  n/a   
 
 
-
 
NC_009483  Gura_4401  methyl-accepting chemotaxis sensory transducer  27.55 
 
 
695 aa  144  5e-33  Geobacter uraniireducens Rf4  Bacteria  normal  0.896591  n/a   
 
 
-
 
NC_007298  Daro_0926  histidine kinase, HAMP region: chemotaxis sensory transducer  29.31 
 
 
539 aa  143  6e-33  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1498  methyl-accepting chemotaxis sensory transducer  34.55 
 
 
687 aa  143  9e-33  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000111484  normal 
 
 
-
 
NC_012039  Cla_0087  MCP-domain signal transduction protein  36.57 
 
 
600 aa  142  1.9999999999999998e-32  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  27.24 
 
 
696 aa  142  1.9999999999999998e-32  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_008321  Shewmr4_0924  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
543 aa  137  4e-31  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003151  methyl-accepting chemotaxis protein  28.89 
 
 
541 aa  137  5e-31  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00103096  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  29.44 
 
 
554 aa  137  6.0000000000000005e-31  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  27.29 
 
 
636 aa  136  8e-31  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  30.39 
 
 
578 aa  136  9e-31  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0959  methyl-accepting chemotaxis sensory transducer  34.8 
 
 
543 aa  136  9e-31  Shewanella sp. MR-7  Bacteria  normal  0.656726  normal  0.666936 
 
 
-
 
NC_008577  Shewana3_0923  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
543 aa  135  9.999999999999999e-31  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  32.91 
 
 
702 aa  136  9.999999999999999e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  29.9 
 
 
539 aa  135  1.9999999999999998e-30  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0106  methyl-accepting chemotaxis sensory transducer  33.1 
 
 
540 aa  135  1.9999999999999998e-30  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  35.45 
 
 
623 aa  135  1.9999999999999998e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  33.57 
 
 
553 aa  134  3.9999999999999996e-30  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_009715  CCV52592_0397  methyl-accepting chemotaxis protein  33.22 
 
 
655 aa  133  6e-30  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1409  methyl-accepting chemotaxis protein  33.22 
 
 
655 aa  133  6e-30  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  34.11 
 
 
543 aa  133  6.999999999999999e-30  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  34.11 
 
 
543 aa  133  6.999999999999999e-30  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  29.35 
 
 
553 aa  133  7.999999999999999e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  33.68 
 
 
688 aa  133  9e-30  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  24.3 
 
 
696 aa  133  1.0000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1202  chemotaxis sensory transducer  33.54 
 
 
380 aa  132  1.0000000000000001e-29  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0908  methyl-accepting chemotaxis sensory transducer  34.11 
 
 
543 aa  132  1.0000000000000001e-29  Shewanella baltica OS155  Bacteria  normal  0.073872  n/a   
 
 
-
 
NC_009783  VIBHAR_02418  hypothetical protein  30.23 
 
 
578 aa  132  2.0000000000000002e-29  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  28.01 
 
 
693 aa  132  2.0000000000000002e-29  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  36.17 
 
 
544 aa  132  2.0000000000000002e-29  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1963  chemotaxis sensory transducer  26.73 
 
 
535 aa  132  2.0000000000000002e-29  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  29.04 
 
 
568 aa  132  2.0000000000000002e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0938  methyl-accepting chemotaxis sensory transducer  31.88 
 
 
548 aa  132  2.0000000000000002e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0925  methyl-accepting chemotaxis sensory transducer  33.77 
 
 
543 aa  132  2.0000000000000002e-29  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
688 aa  131  3e-29  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_009665  Shew185_3424  methyl-accepting chemotaxis sensory transducer  31.88 
 
 
548 aa  131  3e-29  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3579  methyl-accepting chemotaxis sensory transducer  34.11 
 
 
543 aa  131  3e-29  Shewanella baltica OS195  Bacteria  normal  normal  0.0986947 
 
 
-
 
NC_011663  Sbal223_3352  methyl-accepting chemotaxis sensory transducer  31.88 
 
 
573 aa  131  3e-29  Shewanella baltica OS223  Bacteria  normal  0.729863  normal 
 
 
-
 
NC_009997  Sbal195_3549  methyl-accepting chemotaxis sensory transducer  31.88 
 
 
548 aa  130  4.0000000000000003e-29  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  31.53 
 
 
541 aa  131  4.0000000000000003e-29  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  27.84 
 
 
638 aa  130  4.0000000000000003e-29  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  30.81 
 
 
638 aa  130  5.0000000000000004e-29  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  24.65 
 
 
698 aa  130  6e-29  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  37.69 
 
 
564 aa  130  6e-29  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  32.49 
 
 
554 aa  130  7.000000000000001e-29  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  34.24 
 
 
545 aa  130  8.000000000000001e-29  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_010506  Swoo_4441  methyl-accepting chemotaxis sensory transducer  31.73 
 
 
654 aa  130  8.000000000000001e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0942  putative methyl-accepting chemotaxis sensory transducer  29.78 
 
 
495 aa  130  8.000000000000001e-29  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.000202207  normal 
 
 
-
 
NC_011138  MADE_01222  methyl-accepting chemotaxis protein  30.11 
 
 
580 aa  129  1.0000000000000001e-28  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.566871  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  32.32 
 
 
554 aa  129  1.0000000000000001e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  38.16 
 
 
545 aa  129  1.0000000000000001e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  35.32 
 
 
555 aa  129  1.0000000000000001e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2937  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
495 aa  129  1.0000000000000001e-28  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000865197  normal  0.384283 
 
 
-
 
NC_008322  Shewmr7_3019  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
495 aa  129  1.0000000000000001e-28  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00108184  normal 
 
 
-
 
NC_008577  Shewana3_3116  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
495 aa  129  1.0000000000000001e-28  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00299178  normal 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
688 aa  129  2.0000000000000002e-28  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_009052  Sbal_1082  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
495 aa  128  2.0000000000000002e-28  Shewanella baltica OS155  Bacteria  hitchhiker  0.000101058  n/a   
 
 
-
 
NC_007492  Pfl01_2554  chemotaxis sensory transducer  33.7 
 
 
663 aa  128  2.0000000000000002e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.486048 
 
 
-
 
NC_009997  Sbal195_1176  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
495 aa  128  2.0000000000000002e-28  Shewanella baltica OS195  Bacteria  hitchhiker  0.00652986  normal 
 
 
-
 
NC_007575  Suden_0209  methyl-accepting chemotaxis sensory transducer  42.63 
 
 
658 aa  129  2.0000000000000002e-28  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.603066  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  30.35 
 
 
640 aa  129  2.0000000000000002e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  29.35 
 
 
548 aa  128  2.0000000000000002e-28  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  29.43 
 
 
545 aa  129  2.0000000000000002e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_009665  Shew185_1142  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
495 aa  128  3e-28  Shewanella baltica OS185  Bacteria  normal  0.0413666  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  29.03 
 
 
631 aa  128  3e-28  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.02 
 
 
628 aa  127  4.0000000000000003e-28  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_011663  Sbal223_3213  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
495 aa  127  4.0000000000000003e-28  Shewanella baltica OS223  Bacteria  normal  0.023485  normal 
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  31.74 
 
 
554 aa  127  4.0000000000000003e-28  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  31.88 
 
 
554 aa  127  5e-28  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  31.88 
 
 
554 aa  127  5e-28  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>