More than 300 homologs were found in PanDaTox collection
for query gene Suden_0989 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_0983  methyl-accepting chemotaxis sensory transducer  67.92 
 
 
720 aa  1004    Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0989  methyl-accepting chemotaxis sensory transducer  100 
 
 
720 aa  1455    Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0377  Nitrate and nitrite sensing domain protein  34.75 
 
 
661 aa  306  7e-82  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.000413313  n/a   
 
 
-
 
NC_007575  Suden_0209  methyl-accepting chemotaxis sensory transducer  33.68 
 
 
658 aa  287  4e-76  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.603066  n/a   
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  31.07 
 
 
666 aa  275  2.0000000000000002e-72  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  29.38 
 
 
668 aa  250  5e-65  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  31.59 
 
 
662 aa  248  2e-64  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  33.09 
 
 
662 aa  248  3e-64  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
661 aa  244  3e-63  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_0763  methyl-accepting chemotaxis protein  31.5 
 
 
661 aa  240  5.999999999999999e-62  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0975  methyl-accepting chemotaxis protein  44.55 
 
 
365 aa  237  5.0000000000000005e-61  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.245078  n/a   
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  32.27 
 
 
664 aa  234  6e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_008322  Shewmr7_1760  methyl-accepting chemotaxis sensory transducer  30.31 
 
 
664 aa  232  2e-59  Shewanella sp. MR-7  Bacteria  normal  0.106787  normal  0.536367 
 
 
-
 
NC_009438  Sputcn32_1813  methyl-accepting chemotaxis sensory transducer  30.1 
 
 
664 aa  229  1e-58  Shewanella putrefaciens CN-32  Bacteria  normal  0.280908  n/a   
 
 
-
 
NC_008577  Shewana3_1790  methyl-accepting chemotaxis sensory transducer  30.63 
 
 
664 aa  229  1e-58  Shewanella sp. ANA-3  Bacteria  normal  0.119789  normal  0.182995 
 
 
-
 
NC_008321  Shewmr4_1685  methyl-accepting chemotaxis sensory transducer  30.15 
 
 
664 aa  227  5.0000000000000005e-58  Shewanella sp. MR-4  Bacteria  normal  0.0832618  normal  0.158688 
 
 
-
 
NC_011663  Sbal223_2369  methyl-accepting chemotaxis sensory transducer  31.74 
 
 
664 aa  225  2e-57  Shewanella baltica OS223  Bacteria  normal  0.0315396  normal  0.0961625 
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  29.89 
 
 
664 aa  224  4.9999999999999996e-57  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1957  methyl-accepting chemotaxis sensory transducer  31.56 
 
 
664 aa  223  9.999999999999999e-57  Shewanella baltica OS195  Bacteria  normal  0.257458  normal  0.211978 
 
 
-
 
NC_009665  Shew185_1950  methyl-accepting chemotaxis sensory transducer  31.56 
 
 
664 aa  222  1.9999999999999999e-56  Shewanella baltica OS185  Bacteria  normal  0.0377955  n/a   
 
 
-
 
NC_012039  Cla_1032  MCP-domain signal transduction protein  40.99 
 
 
375 aa  221  3e-56  Campylobacter lari RM2100  Bacteria  normal  0.60166  n/a   
 
 
-
 
NC_013512  Sdel_0157  chemotaxis sensory transducer  42.11 
 
 
447 aa  218  2e-55  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.0930636  n/a   
 
 
-
 
NC_003912  CJE0498  methyl-accepting chemotaxis protein  42.49 
 
 
365 aa  215  1.9999999999999998e-54  Campylobacter jejuni RM1221  Bacteria  normal  0.654005  n/a   
 
 
-
 
NC_008787  CJJ81176_0473  methyl-accepting chemotaxis protein  42.49 
 
 
365 aa  214  4.9999999999999996e-54  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.614165  n/a   
 
 
-
 
NC_012917  PC1_0413  methyl-accepting chemotaxis sensory transducer  28.52 
 
 
653 aa  211  4e-53  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0492  methyl-accepting chemotaxis sensory transducer  29.14 
 
 
649 aa  209  2e-52  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0043  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
421 aa  206  9e-52  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  29.83 
 
 
664 aa  206  1e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_008599  CFF8240_0511  methyl-accepting chemotaxis protein  41.64 
 
 
361 aa  205  2e-51  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.737393  n/a   
 
 
-
 
NC_009715  CCV52592_0520  GntT protein  42.67 
 
 
306 aa  203  7e-51  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1496  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
632 aa  203  9.999999999999999e-51  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0988  methyl-accepting chemotaxis sensory transducer  31.58 
 
 
652 aa  201  5e-50  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0921  methyl-accepting chemotaxis sensory transducer  39.39 
 
 
483 aa  198  3e-49  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0016  chemotaxis sensory transducer  41.12 
 
 
357 aa  196  1e-48  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.760621  n/a   
 
 
-
 
NC_013512  Sdel_0367  chemotaxis sensory transducer  39.8 
 
 
483 aa  194  4e-48  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.124323  n/a   
 
 
-
 
NC_007575  Suden_0981  methyl-accepting chemotaxis sensory transducer  40.3 
 
 
635 aa  187  8e-46  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.779847  n/a   
 
 
-
 
NC_012912  Dd1591_1251  methyl-accepting chemotaxis sensory transducer  27.3 
 
 
646 aa  187  8e-46  Dickeya zeae Ech1591  Bacteria  normal  0.457093  n/a   
 
 
-
 
NC_012880  Dd703_2657  methyl-accepting chemotaxis sensory transducer  26.84 
 
 
646 aa  184  4.0000000000000006e-45  Dickeya dadantii Ech703  Bacteria  normal  0.653915  n/a   
 
 
-
 
NC_007575  Suden_0283  methyl-accepting chemotaxis sensory transducer  41.42 
 
 
442 aa  184  5.0000000000000004e-45  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0447763  n/a   
 
 
-
 
NC_009802  CCC13826_1521  methyl-accepting chemotaxis protein  44.36 
 
 
360 aa  181  2.9999999999999997e-44  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1924  methyl-accepting chemotaxis sensory transducer  31.05 
 
 
531 aa  172  2e-41  Shewanella baltica OS155  Bacteria  normal  0.666083  n/a   
 
 
-
 
NC_011769  DvMF_1114  methyl-accepting chemotaxis sensory transducer  26.32 
 
 
700 aa  172  2e-41  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.655641 
 
 
-
 
NC_013512  Sdel_2026  chemotaxis sensory transducer  41.13 
 
 
440 aa  171  5e-41  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3099  methyl-accepting chemotaxis sensory transducer  26.61 
 
 
672 aa  170  9e-41  Marinobacter aquaeolei VT8  Bacteria  normal  0.500846  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  27.44 
 
 
653 aa  169  1e-40  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_009654  Mmwyl1_0982  methyl-accepting chemotaxis sensory transducer  27.87 
 
 
663 aa  164  5.0000000000000005e-39  Marinomonas sp. MWYL1  Bacteria  normal  0.293812  normal 
 
 
-
 
NC_010725  Mpop_4364  methyl-accepting chemotaxis sensory transducer  27.83 
 
 
694 aa  160  9e-38  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009802  CCC13826_1394  putative 6-pyruvoyl tetrahydrobiopterin synthase (ptps; ptp synthase)  30.54 
 
 
656 aa  158  3e-37  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  26.22 
 
 
653 aa  156  1e-36  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  27.1 
 
 
653 aa  149  1.0000000000000001e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009715  CCV52592_1961  putative DNA-binding response regulator  35.02 
 
 
421 aa  149  2.0000000000000003e-34  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0920  nitrate and nitrite sensing methyl-accepting chemotaxis protein  25.93 
 
 
662 aa  148  4.0000000000000006e-34  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  26.24 
 
 
664 aa  147  9e-34  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  25.88 
 
 
645 aa  144  8e-33  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3522  methyl-accepting chemotaxis sensory transducer  30.1 
 
 
362 aa  143  9.999999999999999e-33  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2497  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
372 aa  143  9.999999999999999e-33  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.854874 
 
 
-
 
NC_009665  Shew185_3397  methyl-accepting chemotaxis sensory transducer  30.1 
 
 
362 aa  143  9.999999999999999e-33  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3301  methyl-accepting chemotaxis sensory transducer  30.1 
 
 
362 aa  142  1.9999999999999998e-32  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1055  methyl-accepting chemotaxis sensory transducer  30.1 
 
 
362 aa  142  3e-32  Shewanella baltica OS223  Bacteria  normal  0.0655525  hitchhiker  0.0000230906 
 
 
-
 
NC_004347  SO_1144  methyl-accepting chemotaxis protein  29.43 
 
 
362 aa  141  4.999999999999999e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0968  methyl-accepting chemotaxis sensory transducer  29.77 
 
 
362 aa  140  7e-32  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009715  CCV52592_1471  DNA processing chain A  28.28 
 
 
651 aa  139  2e-31  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1006  methyl-accepting chemotaxis sensory transducer  29.43 
 
 
362 aa  139  2e-31  Shewanella sp. MR-7  Bacteria  normal  normal  0.963071 
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  26.63 
 
 
605 aa  139  2e-31  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_011138  MADE_03785  methyl-accepting chemotaxis protein  32.22 
 
 
360 aa  139  2e-31  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1234  methyl-accepting chemotaxis protein  32.32 
 
 
418 aa  136  9.999999999999999e-31  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0569  methyl-accepting chemotaxis sensory transducer  30.63 
 
 
483 aa  136  1.9999999999999998e-30  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0970  methyl-accepting chemotaxis sensory transducer  27.52 
 
 
362 aa  135  3e-30  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0524  methyl-accepting chemotaxis protein  30.98 
 
 
367 aa  134  7.999999999999999e-30  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008787  CJJ81176_1205  methyl-accepting chemotaxis protein  43.64 
 
 
459 aa  133  1.0000000000000001e-29  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1324  methyl-accepting chemotaxis protein  43.64 
 
 
459 aa  133  1.0000000000000001e-29  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_0539  methyl-accepting chemotaxis protein  43.64 
 
 
459 aa  133  1.0000000000000001e-29  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0416  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
366 aa  130  6e-29  Thauera sp. MZ1T  Bacteria  normal  0.217637  n/a   
 
 
-
 
NC_010814  Glov_3525  methyl-accepting chemotaxis sensory transducer  27.85 
 
 
658 aa  129  2.0000000000000002e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3185  putative methyl-accepting chemotaxis sensory transducer  29.21 
 
 
360 aa  127  6e-28  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_04747  methyl-accepting chemotaxis protein  34.65 
 
 
361 aa  127  7e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2936  methyl-accepting chemotaxis sensory transducer  27.48 
 
 
362 aa  126  1e-27  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2075  methyl-accepting chemotaxis protein  33.6 
 
 
362 aa  124  5e-27  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0962  MCP-domain signal transduction protein  44.03 
 
 
458 aa  123  9.999999999999999e-27  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0869  glutamine ABC transporter, ATP-binding protein  53.85 
 
 
649 aa  123  9.999999999999999e-27  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1957  methyl-accepting chemotaxis protein  53.85 
 
 
654 aa  122  1.9999999999999998e-26  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3981  methyl-accepting chemotaxis sensory transducer  28.9 
 
 
362 aa  122  1.9999999999999998e-26  Marinomonas sp. MWYL1  Bacteria  normal  0.684526  normal  0.542266 
 
 
-
 
NC_008345  Sfri_2964  methyl-accepting chemotaxis sensory transducer  32.64 
 
 
361 aa  122  1.9999999999999998e-26  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  24.12 
 
 
674 aa  122  3e-26  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_011080  SNSL254_A3390  putative methyl-accepting chemotaxis protein  30.04 
 
 
351 aa  122  3e-26  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.927334 
 
 
-
 
NC_011205  SeD_A3483  putative methyl-accepting chemotaxis protein  30.04 
 
 
352 aa  122  3e-26  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3310  putative methyl-accepting chemotaxis protein  30.04 
 
 
352 aa  122  3e-26  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.740696  n/a   
 
 
-
 
NC_013512  Sdel_1205  chemotaxis sensory transducer  30.99 
 
 
713 aa  122  3e-26  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3384  putative methyl-accepting chemotaxis protein  30.04 
 
 
352 aa  122  3e-26  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.644477  normal  0.732859 
 
 
-
 
NC_011094  SeSA_A3320  putative methyl-accepting chemotaxis protein  30.04 
 
 
351 aa  122  3e-26  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.781767  normal 
 
 
-
 
NC_008322  Shewmr7_1501  methyl-accepting chemotaxis sensory transducer  32.79 
 
 
579 aa  121  6e-26  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009715  CCV52592_0397  methyl-accepting chemotaxis protein  57.55 
 
 
655 aa  120  7e-26  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1409  methyl-accepting chemotaxis protein  57.55 
 
 
655 aa  120  7e-26  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1582  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
678 aa  120  7e-26  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.85269 
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  28.88 
 
 
700 aa  119  1.9999999999999998e-25  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_008321  Shewmr4_1436  methyl-accepting chemotaxis sensory transducer  32.46 
 
 
579 aa  118  3e-25  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009715  CCV52592_0395  UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase)  55.86 
 
 
663 aa  118  3.9999999999999997e-25  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1856  acyl-CoA hydrolase  46.62 
 
 
654 aa  117  6.9999999999999995e-25  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0262  chemotaxis sensory transducer  28.92 
 
 
650 aa  117  8.999999999999998e-25  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  31.9 
 
 
565 aa  116  1.0000000000000001e-24  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>