More than 300 homologs were found in PanDaTox collection
for query gene Suden_0827 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_0827  response regulator receiver domain-containing protein  100 
 
 
221 aa  432  1e-120  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.914575  n/a   
 
 
-
 
NC_013512  Sdel_2081  response regulator receiver  54.59 
 
 
224 aa  240  1e-62  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0106  response regulator receiver  39.72 
 
 
218 aa  166  2e-40  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1378  response regulator receiver domain-containing protein  28.11 
 
 
219 aa  121  9.999999999999999e-27  Geobacter metallireducens GS-15  Bacteria  normal  0.321431  normal  0.0110306 
 
 
-
 
NC_012918  GM21_1440  response regulator receiver protein  28.37 
 
 
219 aa  116  1.9999999999999998e-25  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013512  Sdel_0363  response regulator receiver  39.29 
 
 
228 aa  90.1  2e-17  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0247  two component transcriptional regulator  35.83 
 
 
226 aa  82.8  0.000000000000004  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2024  multi-sensor signal transduction histidine kinase  25.42 
 
 
517 aa  79.3  0.00000000000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2195  multi-sensor signal transduction histidine kinase  24.29 
 
 
502 aa  77  0.0000000000002  Geobacter sp. M21  Bacteria  n/a    normal  0.067402 
 
 
-
 
NC_012918  GM21_2098  multi-sensor signal transduction histidine kinase  32.03 
 
 
547 aa  76.3  0.0000000000004  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000413163 
 
 
-
 
NC_013512  Sdel_0685  response regulator receiver  36.92 
 
 
236 aa  76.3  0.0000000000004  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2120  multi-sensor signal transduction histidine kinase  28.95 
 
 
547 aa  75.9  0.0000000000005  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4377  multi-sensor signal transduction histidine kinase  28.57 
 
 
636 aa  74.7  0.000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0893  diguanylate cyclase  34.4 
 
 
566 aa  73.6  0.000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0448  response regulator receiver  31.45 
 
 
224 aa  72.4  0.000000000005  Sulfurospirillum deleyianum DSM 6946  Bacteria  unclonable  0.00000000838603  n/a   
 
 
-
 
NC_010814  Glov_1899  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  25.19 
 
 
616 aa  72.4  0.000000000006  Geobacter lovleyi SZ  Bacteria  normal  0.764058  n/a   
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  36.94 
 
 
470 aa  71.6  0.000000000009  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_002939  GSU0280  Fis family transcriptional regulator  31.72 
 
 
450 aa  70.9  0.00000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.928901  n/a   
 
 
-
 
NC_009715  CCV52592_1547  cytochrome c biogenesis protein  33.07 
 
 
220 aa  70.9  0.00000000001  Campylobacter curvus 525.92  Bacteria  normal  0.0873939  n/a   
 
 
-
 
NC_013512  Sdel_2139  response regulator receiver  30.89 
 
 
236 aa  70.1  0.00000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0705  response regulator receiver  31.82 
 
 
231 aa  70.1  0.00000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00025775  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0590  two component, sigma54 specific, transcriptional regulator, Fis family  35.45 
 
 
440 aa  70.1  0.00000000002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0876  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  27.45 
 
 
709 aa  70.5  0.00000000002  Geobacter uraniireducens Rf4  Bacteria  normal  0.0730078  n/a   
 
 
-
 
NC_009715  CCV52592_0851  two component transcriptional regulator  27.13 
 
 
230 aa  68.6  0.00000000006  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1399  response regulator receiver modulated diguanylate cyclase  26.62 
 
 
476 aa  68.9  0.00000000006  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  32.46 
 
 
227 aa  68.6  0.00000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal 
 
 
-
 
NC_002939  GSU1653  sigma-54 dependent DNA-binding response regulator  34.75 
 
 
478 aa  67.8  0.0000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1562  histidine kinase  33.1 
 
 
1296 aa  67.8  0.0000000001  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.655639  n/a   
 
 
-
 
NC_010814  Glov_3210  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  30.09 
 
 
425 aa  67  0.0000000002  Geobacter lovleyi SZ  Bacteria  normal  0.141244  n/a   
 
 
-
 
NC_009802  CCC13826_1869  NAD(P)H-flavin oxidoreductase  31.5 
 
 
229 aa  67  0.0000000002  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0722  response regulator receiver domain-containing protein  33.88 
 
 
227 aa  67  0.0000000002  Campylobacter concisus 13826  Bacteria  normal  0.0554017  n/a   
 
 
-
 
NC_010655  Amuc_1728  two component transcriptional regulator, winged helix family  27.78 
 
 
234 aa  67  0.0000000002  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.541096  normal 
 
 
-
 
NC_013173  Dbac_0628  two component, sigma54 specific, transcriptional regulator, Fis family  31.96 
 
 
446 aa  67  0.0000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1219  response regulator receiver sensor signal transduction histidine kinase  27.54 
 
 
396 aa  66.6  0.0000000003  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.0000364001 
 
 
-
 
NC_007575  Suden_1991  two component transcriptional regulator  32.76 
 
 
229 aa  66.2  0.0000000003  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.656084  n/a   
 
 
-
 
NC_009784  VIBHAR_06763  transcriptional regulatory protein CpxR  29.29 
 
 
221 aa  66.6  0.0000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013061  Phep_2824  ATP-binding region ATPase domain protein  30 
 
 
1374 aa  65.5  0.0000000006  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7488  two component response regulator  28.57 
 
 
228 aa  65.1  0.0000000007  Agrobacterium vitis S4  Bacteria  normal  0.461205  n/a   
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  33.62 
 
 
463 aa  65.1  0.0000000008  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_013512  Sdel_1920  response regulator receiver  31.54 
 
 
226 aa  65.1  0.0000000008  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2056  AraC family DNA-binding response regulator  32.54 
 
 
507 aa  65.1  0.0000000009  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3153  response regulator receiver sensor signal transduction histidine kinase  31.86 
 
 
366 aa  64.7  0.000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1649  two component, sigma54 specific, Fis family transcriptional regulator  27.89 
 
 
479 aa  64.7  0.000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2141  two component AraC family transcriptional regulator  28.65 
 
 
260 aa  64.3  0.000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1534  two component, sigma-54 specific, Fis family transcriptional regulator  32.14 
 
 
463 aa  64.7  0.000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2242  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
464 aa  64.3  0.000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.719582 
 
 
-
 
NC_007575  Suden_0987  response regulator receiver domain-containing protein  30.95 
 
 
420 aa  64.7  0.000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1832  two component transcriptional regulator  26.21 
 
 
245 aa  64.7  0.000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.366424  normal  0.561636 
 
 
-
 
NC_002939  GSU2506  sensory box protein/sigma-54 dependent DNA-binding response regulator  34.51 
 
 
564 aa  63.9  0.000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.92979  n/a   
 
 
-
 
NC_009719  Plav_0080  two component transcriptional regulator  24.66 
 
 
257 aa  63.9  0.000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.479264  normal 
 
 
-
 
NC_010320  Teth514_2061  response regulator receiver modulated diguanylate cyclase  29.49 
 
 
318 aa  64.3  0.000000002  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.0000000365539  n/a   
 
 
-
 
NC_009972  Haur_2161  adenylate/guanylate cyclase with GAF sensor(s)  30.82 
 
 
1020 aa  63.5  0.000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0428251  n/a   
 
 
-
 
NC_008261  CPF_2344  AraC family DNA-binding response regulator  34.07 
 
 
507 aa  63.9  0.000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.627636  n/a   
 
 
-
 
NC_011883  Ddes_0324  response regulator receiver protein  31.73 
 
 
126 aa  63.5  0.000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.336165  n/a   
 
 
-
 
NC_008687  Pden_4008  two component, sigma54 specific, Fis family transcriptional regulator  26.09 
 
 
456 aa  63.9  0.000000002  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.704595 
 
 
-
 
NC_002977  MCA2848  nitrogen regulation protein NtrX, putative  27.93 
 
 
455 aa  63.2  0.000000003  Methylococcus capsulatus str. Bath  Bacteria  normal  0.754871  n/a   
 
 
-
 
NC_013457  VEA_000851  probable transcriptional regulator SyrB  29.63 
 
 
221 aa  63.2  0.000000003  Vibrio sp. Ex25  Bacteria  decreased coverage  0.00675785  n/a   
 
 
-
 
NC_011146  Gbem_2122  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  26.57 
 
 
953 aa  63.5  0.000000003  Geobacter bemidjiensis Bem  Bacteria  normal  0.0111685  n/a   
 
 
-
 
NC_008751  Dvul_0836  two component, sigma54 specific, Fis family transcriptional regulator  28.79 
 
 
469 aa  63.2  0.000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.0464248 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  31.76 
 
 
122 aa  62.8  0.000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1874  two component transcriptional regulator  24.86 
 
 
235 aa  62.8  0.000000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.418938  normal 
 
 
-
 
NC_013037  Dfer_0559  histidine kinase  26.96 
 
 
1327 aa  62.8  0.000000004  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.00477073  normal 
 
 
-
 
NC_013512  Sdel_0892  response regulator receiver  30.08 
 
 
233 aa  62.4  0.000000005  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_006692  CNG02240  protein-histidine kinase, putative  30.09 
 
 
1816 aa  62  0.000000006  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_007404  Tbd_0904  two component Fis family transcriptional regulator  30.28 
 
 
454 aa  62  0.000000006  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.629928  normal 
 
 
-
 
NC_011146  Gbem_2407  response regulator receiver modulated metal dependent phosphohydrolase  30.63 
 
 
347 aa  62  0.000000006  Geobacter bemidjiensis Bem  Bacteria  normal  0.21688  n/a   
 
 
-
 
NC_008346  Swol_1041  response regulator receiver protein  31.58 
 
 
365 aa  62  0.000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1811  response regulator receiver modulated metal dependent phosphohydrolase  30.63 
 
 
347 aa  62  0.000000007  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00843757 
 
 
-
 
NC_013216  Dtox_1013  two component, sigma54 specific, transcriptional regulator, Fis family  32.17 
 
 
456 aa  62  0.000000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0616674 
 
 
-
 
NC_008048  Sala_0758  two component transcriptional regulator  25 
 
 
244 aa  61.6  0.000000008  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.885545  normal 
 
 
-
 
NC_003912  CJE1664  DNA-binding response regulator  28.83 
 
 
226 aa  61.6  0.000000009  Campylobacter jejuni RM1221  Bacteria  normal  0.690265  n/a   
 
 
-
 
NC_009441  Fjoh_0638  two component, sigma54 specific, Fis family transcriptional regulator  30.5 
 
 
453 aa  61.6  0.000000009  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0332  two component, sigma54 specific, transcriptional regulator, Fis family  27.7 
 
 
469 aa  61.2  0.00000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.465248 
 
 
-
 
NC_011729  PCC7424_1458  GAF sensor hybrid histidine kinase  27.87 
 
 
585 aa  60.8  0.00000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010501  PputW619_3696  two component, sigma54 specific, Fis family transcriptional regulator  31.19 
 
 
458 aa  60.8  0.00000001  Pseudomonas putida W619  Bacteria  normal  0.12736  normal 
 
 
-
 
NC_011832  Mpal_1331  multi-sensor signal transduction histidine kinase  32.2 
 
 
576 aa  61.2  0.00000001  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_010002  Daci_2057  two component, sigma54 specific, Fis family transcriptional regulator  28.93 
 
 
448 aa  61.6  0.00000001  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0887  response regulator receiver modulated metal dependent phosphohydrolase  28.36 
 
 
496 aa  61.2  0.00000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.384329  normal 
 
 
-
 
NC_011146  Gbem_0681  response regulator receiver protein  25.78 
 
 
639 aa  61.6  0.00000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.657626  n/a   
 
 
-
 
NC_010001  Cphy_1722  two component AraC family transcriptional regulator  35.25 
 
 
508 aa  61.2  0.00000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3932  two component, sigma54 specific, Fis family transcriptional regulator  30.63 
 
 
451 aa  61.2  0.00000001  Pseudomonas putida GB-1  Bacteria  normal  0.215439  normal 
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  32.43 
 
 
151 aa  60.8  0.00000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2105  two component transcriptional regulator  31.01 
 
 
253 aa  60.8  0.00000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2096  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  26.57 
 
 
953 aa  61.6  0.00000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000903564 
 
 
-
 
NC_008787  CJJ81176_1483  DNA-binding response regulator  28.7 
 
 
226 aa  61.2  0.00000001  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4371  two component, sigma54 specific, transcriptional regulator, Fis family  31.53 
 
 
451 aa  60.8  0.00000002  Pseudomonas putida KT2440  Bacteria  normal  0.109269  normal  0.91149 
 
 
-
 
NC_007435  BURPS1710b_A1382  putative sigma-54 interacting response regulator  30.63 
 
 
456 aa  60.1  0.00000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.134405  n/a   
 
 
-
 
NC_007498  Pcar_2017  response regulator CheY  30.71 
 
 
129 aa  60.1  0.00000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1558  response regulator receiver protein  30.08 
 
 
566 aa  60.5  0.00000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3034  sigma-54 dependent DNA-binding response regulator  30.63 
 
 
456 aa  60.1  0.00000002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1492  PAS/PAC sensor hybrid histidine kinase  28.79 
 
 
606 aa  60.5  0.00000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.0216645  n/a   
 
 
-
 
NC_008835  BMA10229_1293  sigma-54 dependent DNA-binding response regulator  30.63 
 
 
456 aa  60.1  0.00000002  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0783  two component transcriptional regulator  31.03 
 
 
231 aa  60.8  0.00000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0853  two component transcriptional regulator, AraC family  28.8 
 
 
509 aa  60.8  0.00000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2943  response regulator receiver modulated diguanylate cyclase  29.23 
 
 
438 aa  60.8  0.00000002  Magnetococcus sp. MC-1  Bacteria  normal  0.641955  normal 
 
 
-
 
NC_008599  CFF8240_0377  DNA-binding response regulator  28.33 
 
 
226 aa  60.1  0.00000002  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.306284  n/a   
 
 
-
 
NC_009079  BMA10247_A2268  sigma-54 dependent DNA-binding response regulator  30.63 
 
 
456 aa  60.1  0.00000002  Burkholderia mallei NCTC 10247  Bacteria  normal  0.071991  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  21.65 
 
 
374 aa  60.1  0.00000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_011899  Hore_19910  response regulator receiver protein  29.77 
 
 
386 aa  60.8  0.00000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1004  sigma-54 dependent DNA-binding response regulator  30.63 
 
 
456 aa  60.1  0.00000002  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
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