More than 300 homologs were found in PanDaTox collection
for query gene Suden_0080 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_0080  carbamoyl phosphate synthase small subunit  100 
 
 
381 aa  789    Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0555876  n/a   
 
 
-
 
NC_013512  Sdel_1923  carbamoyl-phosphate synthase, small subunit  65.86 
 
 
376 aa  516  1.0000000000000001e-145  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1365  carbamoyl phosphate synthase small subunit  56.87 
 
 
370 aa  457  9.999999999999999e-129  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0372  carbamoyl phosphate synthase small subunit  57.68 
 
 
372 aa  453  1.0000000000000001e-126  Campylobacter lari RM2100  Bacteria  normal  0.710371  n/a   
 
 
-
 
NC_003912  CJE1667  carbamoyl phosphate synthase small subunit  57.14 
 
 
372 aa  450  1e-125  Campylobacter jejuni RM1221  Bacteria  normal  0.764273  n/a   
 
 
-
 
NC_009715  CCV52592_0898  carbamoyl phosphate synthase small subunit  55.68 
 
 
372 aa  448  1e-125  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1842  carbamoyl phosphate synthase small subunit  57.14 
 
 
372 aa  450  1e-125  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1486  carbamoyl phosphate synthase small subunit  57.14 
 
 
372 aa  450  1e-125  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0374  carbamoyl phosphate synthase small subunit  55.26 
 
 
372 aa  433  1e-120  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.259236  n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  44.15 
 
 
377 aa  348  1e-94  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  44.3 
 
 
376 aa  325  8.000000000000001e-88  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  43.35 
 
 
391 aa  325  9e-88  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  44.71 
 
 
389 aa  324  2e-87  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  42.42 
 
 
384 aa  320  1.9999999999999998e-86  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  45.24 
 
 
374 aa  320  3e-86  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  44.15 
 
 
379 aa  320  3.9999999999999996e-86  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  42.52 
 
 
384 aa  319  6e-86  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  45.65 
 
 
364 aa  318  7e-86  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  43.97 
 
 
372 aa  318  7e-86  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0435  carbamoyl phosphate synthase small subunit  41.6 
 
 
392 aa  315  7e-85  Sphingomonas wittichii RW1  Bacteria  normal  0.29183  normal 
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  43.2 
 
 
376 aa  315  9e-85  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  42.82 
 
 
391 aa  315  9.999999999999999e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  44.53 
 
 
373 aa  315  9.999999999999999e-85  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  42.41 
 
 
382 aa  313  1.9999999999999998e-84  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  42.89 
 
 
382 aa  313  1.9999999999999998e-84  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_009832  Spro_0713  carbamoyl phosphate synthase small subunit  42.33 
 
 
382 aa  313  2.9999999999999996e-84  Serratia proteamaculans 568  Bacteria  normal  normal  0.123455 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  44.3 
 
 
380 aa  313  2.9999999999999996e-84  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  44.3 
 
 
380 aa  313  2.9999999999999996e-84  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  42.63 
 
 
367 aa  313  3.9999999999999997e-84  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  43.5 
 
 
373 aa  313  3.9999999999999997e-84  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  42.97 
 
 
372 aa  313  3.9999999999999997e-84  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  44.18 
 
 
374 aa  312  4.999999999999999e-84  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  41.82 
 
 
385 aa  312  5.999999999999999e-84  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  42.59 
 
 
369 aa  312  6.999999999999999e-84  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  42.63 
 
 
382 aa  312  6.999999999999999e-84  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  42.37 
 
 
382 aa  311  7.999999999999999e-84  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  43.97 
 
 
356 aa  311  9e-84  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  42.86 
 
 
386 aa  311  1e-83  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  42.37 
 
 
382 aa  311  1e-83  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  43.09 
 
 
366 aa  311  1e-83  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  41.97 
 
 
379 aa  310  2e-83  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  42.71 
 
 
383 aa  311  2e-83  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  43.16 
 
 
373 aa  310  4e-83  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  44.74 
 
 
379 aa  310  4e-83  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0878  carbamoyl-phosphate synthase, small subunit  42.25 
 
 
378 aa  310  4e-83  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3841  carbamoyl phosphate synthase small subunit  41.47 
 
 
382 aa  309  5e-83  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3623  carbamoyl phosphate synthase small subunit  42.15 
 
 
382 aa  309  5e-83  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.314254 
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  42.89 
 
 
373 aa  309  5e-83  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  42.74 
 
 
385 aa  309  5e-83  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  41.02 
 
 
398 aa  308  8e-83  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
CP001509  ECD_00036  carbamoyl-phosphate synthase small subunit  41.88 
 
 
382 aa  307  2.0000000000000002e-82  Escherichia coli BL21(DE3)  Bacteria  normal  0.53844  n/a   
 
 
-
 
CP001637  EcDH1_3567  carbamoyl-phosphate synthase, small subunit  41.88 
 
 
382 aa  307  2.0000000000000002e-82  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0033  carbamoyl phosphate synthase small subunit  41.88 
 
 
382 aa  307  2.0000000000000002e-82  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0036  carbamoyl phosphate synthase small subunit  41.88 
 
 
382 aa  307  2.0000000000000002e-82  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  43.72 
 
 
379 aa  307  2.0000000000000002e-82  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  41.71 
 
 
376 aa  307  2.0000000000000002e-82  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_012892  B21_00035  hypothetical protein  41.88 
 
 
382 aa  307  2.0000000000000002e-82  Escherichia coli BL21  Bacteria  normal  0.457385  n/a   
 
 
-
 
NC_009800  EcHS_A0035  carbamoyl phosphate synthase small subunit  41.88 
 
 
382 aa  307  2.0000000000000002e-82  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0035  carbamoyl phosphate synthase small subunit  41.88 
 
 
382 aa  307  2.0000000000000002e-82  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  41.27 
 
 
381 aa  307  2.0000000000000002e-82  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_010159  YpAngola_A0784  carbamoyl phosphate synthase small subunit  41.88 
 
 
391 aa  306  3e-82  Yersinia pestis Angola  Bacteria  normal  0.594963  normal  0.491126 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  43.73 
 
 
388 aa  306  3e-82  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_010498  EcSMS35_0032  carbamoyl phosphate synthase small subunit  41.56 
 
 
391 aa  306  4.0000000000000004e-82  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  41.69 
 
 
416 aa  306  4.0000000000000004e-82  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009708  YpsIP31758_3454  carbamoyl phosphate synthase small subunit  41.47 
 
 
391 aa  306  4.0000000000000004e-82  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  41.3 
 
 
381 aa  306  5.0000000000000004e-82  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_012880  Dd703_0592  carbamoyl-phosphate synthase, small subunit  40.94 
 
 
382 aa  306  6e-82  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0965  carbamoyl phosphate synthase small subunit  41.3 
 
 
386 aa  305  6e-82  Shewanella sp. MR-4  Bacteria  normal  0.0738044  normal 
 
 
-
 
NC_009665  Shew185_3401  carbamoyl phosphate synthase small subunit  41.67 
 
 
391 aa  305  7e-82  Shewanella baltica OS185  Bacteria  hitchhiker  0.00720177  n/a   
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  41.51 
 
 
378 aa  305  7e-82  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_010465  YPK_3583  carbamoyl phosphate synthase small subunit  41.62 
 
 
391 aa  305  8.000000000000001e-82  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3526  carbamoyl phosphate synthase small subunit  41.56 
 
 
386 aa  305  8.000000000000001e-82  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3305  carbamoyl phosphate synthase small subunit  41.78 
 
 
386 aa  305  9.000000000000001e-82  Shewanella baltica OS155  Bacteria  normal  0.314757  n/a   
 
 
-
 
NC_007984  BCI_0559  carbamoyl-phosphate synthase, small subunit  41.88 
 
 
381 aa  305  9.000000000000001e-82  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1141  carbamoyl phosphate synthase small subunit  41.71 
 
 
386 aa  304  1.0000000000000001e-81  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2839  carbamoyl phosphate synthase small subunit  41.41 
 
 
390 aa  305  1.0000000000000001e-81  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00340084  normal  0.0286195 
 
 
-
 
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  42.71 
 
 
375 aa  305  1.0000000000000001e-81  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  41.41 
 
 
387 aa  304  2.0000000000000002e-81  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  43.09 
 
 
367 aa  304  2.0000000000000002e-81  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1003  carbamoyl phosphate synthase small subunit  41.04 
 
 
386 aa  304  2.0000000000000002e-81  Shewanella sp. MR-7  Bacteria  normal  0.0354323  normal 
 
 
-
 
NC_012912  Dd1591_0554  carbamoyl-phosphate synthase, small subunit  40.68 
 
 
381 aa  303  2.0000000000000002e-81  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  42.18 
 
 
373 aa  303  3.0000000000000004e-81  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  43.56 
 
 
380 aa  303  3.0000000000000004e-81  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0975  carbamoyl phosphate synthase small subunit  41.82 
 
 
381 aa  303  3.0000000000000004e-81  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00141878  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  42.55 
 
 
374 aa  303  3.0000000000000004e-81  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  40.46 
 
 
379 aa  303  3.0000000000000004e-81  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  39.07 
 
 
393 aa  303  3.0000000000000004e-81  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  42.55 
 
 
374 aa  303  4.0000000000000003e-81  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  43.47 
 
 
373 aa  303  4.0000000000000003e-81  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  41.71 
 
 
382 aa  302  5.000000000000001e-81  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  42.51 
 
 
373 aa  302  5.000000000000001e-81  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  41.19 
 
 
381 aa  302  6.000000000000001e-81  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_008577  Shewana3_0967  carbamoyl phosphate synthase small subunit  41.04 
 
 
386 aa  302  6.000000000000001e-81  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00370508  normal 
 
 
-
 
NC_009370  OSTLU_28074  Carbamoyl-phosphate synthase S chain  41.78 
 
 
415 aa  302  7.000000000000001e-81  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.210414 
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  41.55 
 
 
359 aa  301  9e-81  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_003910  CPS_3459  carbamoyl phosphate synthase small subunit  41.04 
 
 
383 aa  301  1e-80  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  39.64 
 
 
394 aa  301  1e-80  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  39.52 
 
 
386 aa  300  2e-80  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1982  carbamoyl-phosphate synthase small subunit  40.31 
 
 
386 aa  300  2e-80  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.157941  normal  0.0125598 
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  41.84 
 
 
357 aa  300  3e-80  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
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