77 homologs were found in PanDaTox collection
for query gene Strop_4515 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_4515  hypothetical protein  100 
 
 
176 aa  344  3e-94  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5025  putative signal transduction histidine kinase  72.78 
 
 
166 aa  219  1.9999999999999999e-56  Salinispora arenicola CNS-205  Bacteria  normal  0.239464  normal  0.0584008 
 
 
-
 
NC_013947  Snas_6464  ATP-binding region ATPase domain-containing protein  44.8 
 
 
164 aa  92.4  3e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.675812 
 
 
-
 
NC_013510  Tcur_0095  putative anti-sigma regulatory factor, serine/threonine protein kinase  42.06 
 
 
174 aa  80.9  0.00000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0038  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.7 
 
 
151 aa  77.4  0.00000000000009  Thermobispora bispora DSM 43833  Bacteria  normal  0.536506  normal 
 
 
-
 
NC_009664  Krad_0168  putative anti-sigma regulatory factor, serine/threonine protein kinase  42.86 
 
 
149 aa  74.3  0.0000000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.129671  normal 
 
 
-
 
NC_013131  Caci_0238  putative anti-sigma regulatory factor, serine/threonine protein kinase  40.31 
 
 
295 aa  68.6  0.00000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.112494 
 
 
-
 
NC_008578  Acel_2108  putative anti-sigma regulatory factor, serine/threonine protein kinase  40.16 
 
 
151 aa  67  0.0000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.262944 
 
 
-
 
NC_014211  Ndas_5266  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.39 
 
 
204 aa  64.3  0.0000000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8367  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.16 
 
 
251 aa  59.7  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_3056  putative regulatory protein  35.77 
 
 
160 aa  59.3  0.00000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8587  putative signal transduction histidine kinase  44.9 
 
 
158 aa  57.8  0.00000008  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00197112  normal  0.613164 
 
 
-
 
NC_013595  Sros_7843  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.24 
 
 
137 aa  57.4  0.00000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.5414  normal 
 
 
-
 
NC_009664  Krad_1570  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.54 
 
 
135 aa  56.2  0.0000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.196284  normal  0.153025 
 
 
-
 
NC_009664  Krad_0346  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.29 
 
 
122 aa  55.8  0.0000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.108962  normal 
 
 
-
 
NC_009664  Krad_4080  protein serine phosphatase with GAF(s) sensor(s)  38.05 
 
 
738 aa  55.5  0.0000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.32388  normal 
 
 
-
 
NC_013595  Sros_5629  putative signal transduction histidine kinase  39.68 
 
 
167 aa  55.1  0.0000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.56187 
 
 
-
 
NC_013595  Sros_2074  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.78 
 
 
136 aa  54.3  0.0000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.148055  normal  0.91426 
 
 
-
 
NC_013131  Caci_0014  putative signal transduction histidine kinase  43.3 
 
 
160 aa  53.9  0.000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2744  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.91 
 
 
155 aa  53.5  0.000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.813583  normal 
 
 
-
 
NC_013131  Caci_6003  protein serine phosphatase with GAF(s) sensor(s)  31.91 
 
 
616 aa  52.4  0.000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.697266  normal  0.4865 
 
 
-
 
NC_007333  Tfu_0979  hypothetical protein  31.39 
 
 
201 aa  52  0.000005  Thermobifida fusca YX  Bacteria  normal  0.454512  n/a   
 
 
-
 
NC_013595  Sros_7294  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.3 
 
 
161 aa  52  0.000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0519  putative signal transduction histidine kinase  36.59 
 
 
165 aa  51.6  0.000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4531  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.15 
 
 
135 aa  51.2  0.000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.556785  normal  0.468222 
 
 
-
 
NC_009664  Krad_4276  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.71 
 
 
180 aa  50.4  0.00001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0915518  normal  0.326932 
 
 
-
 
NC_007777  Francci3_2138  putative serine/threonine kinase anti-sigma factor  36.89 
 
 
155 aa  50.8  0.00001  Frankia sp. CcI3  Bacteria  normal  0.0220396  normal 
 
 
-
 
NC_013131  Caci_2800  putative signal transduction histidine kinase  34.04 
 
 
135 aa  49.7  0.00002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.366639  normal  0.788147 
 
 
-
 
NC_013131  Caci_6631  putative signal transduction histidine kinase  33.88 
 
 
135 aa  50.1  0.00002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0674873 
 
 
-
 
NC_009664  Krad_3741  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.4 
 
 
133 aa  49.3  0.00003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.217317  normal  0.012325 
 
 
-
 
NC_013131  Caci_0019  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.35 
 
 
255 aa  49.3  0.00003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0586  signal transduction histidine kinase, LytS  36.67 
 
 
123 aa  48.9  0.00004  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0183303  hitchhiker  0.00998812 
 
 
-
 
NC_013131  Caci_2880  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.08 
 
 
142 aa  48.5  0.00005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0493061  normal  0.177095 
 
 
-
 
NC_013510  Tcur_1945  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.08 
 
 
142 aa  48.5  0.00005  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00291504  n/a   
 
 
-
 
NC_007333  Tfu_2295  hypothetical protein  33.61 
 
 
200 aa  48.1  0.00006  Thermobifida fusca YX  Bacteria  normal  0.147419  n/a   
 
 
-
 
NC_014165  Tbis_0025  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.93 
 
 
226 aa  48.1  0.00007  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8758  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.78 
 
 
192 aa  47.8  0.00008  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4605  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.42 
 
 
155 aa  47  0.0001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1448  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.1 
 
 
164 aa  47  0.0001  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0047791  n/a   
 
 
-
 
NC_009664  Krad_0233  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.5 
 
 
347 aa  47  0.0001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.211721  hitchhiker  0.0066599 
 
 
-
 
NC_013757  Gobs_4668  ATP-binding region ATPase domain protein  31.85 
 
 
148 aa  46.2  0.0002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1739  PAS/protein phosphatase 2C-like  28.93 
 
 
817 aa  46.2  0.0002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2582  putative signal transduction histidine kinase  36.29 
 
 
150 aa  47  0.0002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0114014 
 
 
-
 
NC_013131  Caci_4098  protein serine phosphatase with GAF(s) sensor(s)  31.58 
 
 
1045 aa  46.2  0.0003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.108116 
 
 
-
 
NC_013595  Sros_6480  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.23 
 
 
134 aa  45.4  0.0004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.903724  normal  0.217215 
 
 
-
 
NC_009664  Krad_0104  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.71 
 
 
141 aa  45.4  0.0004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.141556  normal  0.0323603 
 
 
-
 
NC_007333  Tfu_0976  hypothetical protein  41.51 
 
 
158 aa  45.4  0.0004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1263  response regulator receiver  25.76 
 
 
282 aa  45.1  0.0005  Nocardioides sp. JS614  Bacteria  normal  0.0593741  n/a   
 
 
-
 
NC_009664  Krad_1542  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.1 
 
 
355 aa  45.1  0.0005  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0477003  hitchhiker  0.00647646 
 
 
-
 
NC_014165  Tbis_0857  hypothetical protein  27.94 
 
 
152 aa  45.1  0.0006  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.079747 
 
 
-
 
NC_013510  Tcur_1416  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.31 
 
 
151 aa  44.7  0.0007  Thermomonospora curvata DSM 43183  Bacteria  normal  0.034656  n/a   
 
 
-
 
NC_009664  Krad_4348  putative anti-sigma regulatory factor, serine/threonine protein kinase  30 
 
 
119 aa  44.3  0.0008  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00391365  normal 
 
 
-
 
NC_013510  Tcur_0874  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.93 
 
 
205 aa  44.7  0.0008  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1919  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.2 
 
 
150 aa  44.7  0.0008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0400  putative signal transduction histidine kinase  37 
 
 
203 aa  43.5  0.001  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2770  putative signal transduction histidine kinase  35.05 
 
 
150 aa  43.5  0.001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.416371  normal 
 
 
-
 
NC_014210  Ndas_1650  putative signal transduction histidine kinase  33.88 
 
 
150 aa  44.3  0.001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0223546  normal 
 
 
-
 
NC_014165  Tbis_2480  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.96 
 
 
159 aa  44.3  0.001  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.252056 
 
 
-
 
NC_009921  Franean1_5624  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.76 
 
 
143 aa  43.9  0.001  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.000415643  normal 
 
 
-
 
NC_007777  Francci3_0918  putative serine/threonine kinase anti-sigma factor  31.82 
 
 
142 aa  44.3  0.001  Frankia sp. CcI3  Bacteria  normal  0.283269  normal 
 
 
-
 
NC_013159  Svir_32040  histidine kinase  32.14 
 
 
156 aa  43.5  0.001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.3856  normal  0.302354 
 
 
-
 
NC_013510  Tcur_1968  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
216 aa  44.3  0.001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.075139  n/a   
 
 
-
 
NC_013510  Tcur_4525  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.71 
 
 
130 aa  43.9  0.001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0713  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.59 
 
 
133 aa  43.1  0.002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1873  putative signal transduction histidine kinase  31.93 
 
 
149 aa  42.7  0.003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0156  putative signal transduction histidine kinase  36.73 
 
 
132 aa  42.4  0.003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.888783  normal  0.296506 
 
 
-
 
NC_014210  Ndas_4246  putative signal transduction histidine kinase  38.28 
 
 
164 aa  42.7  0.003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.103074 
 
 
-
 
NC_009921  Franean1_0664  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.17 
 
 
147 aa  42  0.004  Frankia sp. EAN1pec  Bacteria  normal  normal  0.535186 
 
 
-
 
NC_013595  Sros_3148  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.58 
 
 
146 aa  41.6  0.005  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00947281  normal 
 
 
-
 
NC_014165  Tbis_1173  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.38 
 
 
180 aa  41.6  0.005  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0374  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.85 
 
 
248 aa  41.2  0.007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7320  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.41 
 
 
288 aa  41.2  0.007  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.000252308  decreased coverage  0.00000000279842 
 
 
-
 
NC_007333  Tfu_2967  hypothetical protein  38.89 
 
 
166 aa  41.2  0.007  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3110  putative PAS/PAC sensor protein  28.03 
 
 
697 aa  41.6  0.007  Thermomonospora curvata DSM 43183  Bacteria  normal  0.63551  n/a   
 
 
-
 
NC_013510  Tcur_3632  ATP-binding region ATPase domain protein  36.27 
 
 
161 aa  41.2  0.008  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1752  protein phosphatase 2C-like  32.65 
 
 
591 aa  41.2  0.008  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1306  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.64 
 
 
202 aa  41.2  0.008  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00486516  n/a   
 
 
-
 
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