More than 300 homologs were found in PanDaTox collection
for query gene Strop_4132 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_4132  response regulator receiver  100 
 
 
235 aa  459  1e-128  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  58.72 
 
 
241 aa  238  6e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  56.36 
 
 
225 aa  234  6e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  57.4 
 
 
226 aa  229  2e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  56.68 
 
 
222 aa  218  9e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  57.08 
 
 
228 aa  216  3e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  57.47 
 
 
226 aa  214  8e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  55.35 
 
 
214 aa  211  6e-54  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  51.39 
 
 
221 aa  210  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  53.92 
 
 
220 aa  210  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  51.83 
 
 
222 aa  209  3e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  51.63 
 
 
224 aa  208  7e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.4 
 
 
261 aa  207  1e-52  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  52.53 
 
 
221 aa  207  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  54.63 
 
 
247 aa  206  2e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  50.9 
 
 
226 aa  204  1e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  53.05 
 
 
215 aa  204  1e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  50.23 
 
 
225 aa  203  2e-51  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  52.8 
 
 
224 aa  202  4e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  50 
 
 
225 aa  202  4e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  52.8 
 
 
217 aa  199  4e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  50.23 
 
 
223 aa  198  5e-50  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  50.69 
 
 
225 aa  198  5e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.23 
 
 
229 aa  198  6e-50  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  50.23 
 
 
220 aa  198  7e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  52.34 
 
 
217 aa  197  1e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  49.77 
 
 
225 aa  197  1e-49  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  48.66 
 
 
231 aa  197  1e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  51.16 
 
 
221 aa  197  2e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  51.87 
 
 
302 aa  197  2e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  52.53 
 
 
221 aa  196  2e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  50 
 
 
227 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  50.92 
 
 
222 aa  196  3e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  50 
 
 
226 aa  196  3e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  48.18 
 
 
223 aa  195  4e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  49.77 
 
 
226 aa  194  8e-49  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  50.47 
 
 
220 aa  194  8e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  48.36 
 
 
215 aa  194  9e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  48.37 
 
 
214 aa  194  1e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  48.86 
 
 
223 aa  194  1e-48  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  3.86408e-05  hitchhiker  0.000570848 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  50 
 
 
228 aa  194  1e-48  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  50.93 
 
 
213 aa  194  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  49.53 
 
 
225 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47.95 
 
 
224 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  50 
 
 
230 aa  193  2e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  49.32 
 
 
228 aa  191  6e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  50 
 
 
224 aa  191  7e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  47.14 
 
 
225 aa  191  7e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  49.09 
 
 
222 aa  191  9e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  44.81 
 
 
248 aa  190  1e-47  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  48.84 
 
 
215 aa  190  1e-47  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  47.51 
 
 
230 aa  190  1e-47  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  49.77 
 
 
230 aa  191  1e-47  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  50.7 
 
 
225 aa  191  1e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.45 
 
 
222 aa  189  2e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  50.47 
 
 
215 aa  189  2e-47  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  49.3 
 
 
230 aa  190  2e-47  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  47.89 
 
 
218 aa  189  2e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  47.71 
 
 
227 aa  190  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  48.84 
 
 
236 aa  189  3e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  49.07 
 
 
221 aa  189  4e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  49.56 
 
 
226 aa  189  4e-47  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  49.3 
 
 
239 aa  189  4e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  46.55 
 
 
234 aa  188  5e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  48.4 
 
 
226 aa  188  5e-47  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  48.89 
 
 
232 aa  188  6e-47  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  47.66 
 
 
218 aa  187  9e-47  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  50.46 
 
 
218 aa  187  1e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  51.14 
 
 
225 aa  187  1e-46  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  52.09 
 
 
220 aa  187  2e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.09 
 
 
226 aa  186  2e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  49.08 
 
 
227 aa  186  2e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  49.07 
 
 
241 aa  186  2e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  44.92 
 
 
250 aa  186  2e-46  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  50 
 
 
217 aa  187  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  53.42 
 
 
224 aa  187  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  49.3 
 
 
216 aa  186  2e-46  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  48.4 
 
 
225 aa  186  3e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  48.89 
 
 
232 aa  185  5e-46  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  48.39 
 
 
221 aa  185  5e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  44.14 
 
 
233 aa  185  6e-46  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  48.61 
 
 
230 aa  185  6e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.61 
 
 
239 aa  184  7e-46  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  49.77 
 
 
230 aa  185  7e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  46.05 
 
 
221 aa  184  7e-46  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  46.93 
 
 
235 aa  184  7e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  51.15 
 
 
217 aa  185  7e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  7.94288e-08  unclonable  3.32591e-08 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  48.11 
 
 
226 aa  184  7e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  50 
 
 
220 aa  184  8e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  50.93 
 
 
218 aa  184  9e-46  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.95 
 
 
230 aa  184  1e-45  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  47.62 
 
 
229 aa  183  2e-45  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  45.45 
 
 
223 aa  183  2e-45  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  47.27 
 
 
234 aa  183  2e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  48.15 
 
 
224 aa  183  2e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  46.05 
 
 
228 aa  182  3e-45  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  46.61 
 
 
233 aa  182  3e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  46.26 
 
 
221 aa  182  3e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  49.54 
 
 
221 aa  182  5e-45  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  47.98 
 
 
214 aa  182  5e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
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