More than 300 homologs were found in PanDaTox collection
for query gene Strop_3686 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_3686  response regulator receiver  100 
 
 
233 aa  468  1.0000000000000001e-131  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4064  two component transcriptional regulator  96.57 
 
 
233 aa  457  9.999999999999999e-129  Salinispora arenicola CNS-205  Bacteria  normal  0.98903  normal  0.0666639 
 
 
-
 
NC_013595  Sros_8879  response regulator receiver protein  76.21 
 
 
235 aa  348  3e-95  Streptosporangium roseum DSM 43021  Bacteria  normal  0.103439  normal 
 
 
-
 
NC_013510  Tcur_0578  two component transcriptional regulator, winged helix family  74.22 
 
 
244 aa  343  1e-93  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5144  two component transcriptional regulator, winged helix family  72.03 
 
 
236 aa  343  2e-93  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.204078  normal  0.858106 
 
 
-
 
NC_013757  Gobs_4657  two component transcriptional regulator, winged helix family  73.71 
 
 
240 aa  341  5e-93  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3276  winged helix family two component transcriptional regulator  70.09 
 
 
234 aa  328  4e-89  Thermobispora bispora DSM 43833  Bacteria  normal  0.208422  normal  0.192837 
 
 
-
 
NC_009664  Krad_3620  two component transcriptional regulator, winged helix family  70.26 
 
 
239 aa  310  1e-83  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0253056  normal  0.477246 
 
 
-
 
NC_013530  Xcel_2937  two component transcriptional regulator, winged helix family  67.22 
 
 
243 aa  309  2e-83  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0840  two component transcriptional regulator, winged helix family  67.8 
 
 
241 aa  309  2.9999999999999997e-83  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.214337  normal  0.533835 
 
 
-
 
NC_013595  Sros_8872  response regulator receiver protein  70.04 
 
 
234 aa  309  2.9999999999999997e-83  Streptosporangium roseum DSM 43021  Bacteria  normal  0.347509  normal 
 
 
-
 
NC_009565  TBFG_10772  two component system response transcriptional positive regulator phoP  65.22 
 
 
247 aa  308  5e-83  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.864575 
 
 
-
 
NC_012803  Mlut_04130  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  67.97 
 
 
236 aa  307  1.0000000000000001e-82  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118973  n/a   
 
 
-
 
NC_014151  Cfla_0717  two component transcriptional regulator, winged helix family  67.24 
 
 
242 aa  304  8.000000000000001e-82  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00000387016 
 
 
-
 
NC_013169  Ksed_21620  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  67.1 
 
 
238 aa  303  1.0000000000000001e-81  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.019443  normal  0.0473518 
 
 
-
 
NC_013521  Sked_31480  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  67.23 
 
 
239 aa  303  1.0000000000000001e-81  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00376265  normal  0.556858 
 
 
-
 
NC_008726  Mvan_5175  two component transcriptional regulator  64.76 
 
 
236 aa  302  3.0000000000000004e-81  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_07910  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  65.2 
 
 
239 aa  301  4.0000000000000003e-81  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4973  two component transcriptional regulator  62.23 
 
 
239 aa  301  8.000000000000001e-81  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4590  two component transcriptional regulator  62.23 
 
 
239 aa  301  8.000000000000001e-81  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4678  two component transcriptional regulator  62.23 
 
 
239 aa  301  8.000000000000001e-81  Mycobacterium sp. KMS  Bacteria  normal  0.337028  normal  0.895878 
 
 
-
 
NC_009338  Mflv_1581  two component transcriptional regulator  64.76 
 
 
238 aa  300  1e-80  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2051  two component transcriptional regulator, winged helix family  65.81 
 
 
236 aa  298  4e-80  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0784  two component transcriptional regulator  66.67 
 
 
239 aa  298  4e-80  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0822  response regulator receiver  60.18 
 
 
241 aa  288  7e-77  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0530683  n/a   
 
 
-
 
NC_014158  Tpau_3631  two component transcriptional regulator, winged helix family  61.47 
 
 
235 aa  288  7e-77  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4508  two component transcriptional regulator, winged helix family  60.44 
 
 
231 aa  286  2e-76  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3267  winged helix family two component transcriptional regulator  65.18 
 
 
229 aa  285  4e-76  Thermobispora bispora DSM 43833  Bacteria  normal  0.0891778  normal  0.213955 
 
 
-
 
NC_008578  Acel_1449  two component transcriptional regulator  59.65 
 
 
246 aa  283  1.0000000000000001e-75  Acidothermus cellulolyticus 11B  Bacteria  normal  0.566781  normal 
 
 
-
 
NC_010816  BLD_0005  response regulator  60.17 
 
 
243 aa  280  1e-74  Bifidobacterium longum DJO10A  Bacteria  normal  0.201532  n/a   
 
 
-
 
NC_011886  Achl_0899  two component transcriptional regulator, winged helix family  66.67 
 
 
236 aa  280  1e-74  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.383063 
 
 
-
 
NC_009953  Sare_0219  two component transcriptional regulator  62.98 
 
 
237 aa  279  3e-74  Salinispora arenicola CNS-205  Bacteria  normal  0.127265  hitchhiker  0.00333518 
 
 
-
 
NC_013521  Sked_32700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  60.89 
 
 
271 aa  275  3e-73  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.442824  normal  0.485424 
 
 
-
 
NC_007777  Francci3_0234  two component transcriptional regulator  59.64 
 
 
242 aa  275  4e-73  Frankia sp. CcI3  Bacteria  normal  normal  0.925989 
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  59.73 
 
 
237 aa  275  4e-73  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0720  response regulator receiver domain protein  55.37 
 
 
246 aa  275  4e-73  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.351492 
 
 
-
 
NC_009921  Franean1_6588  two component transcriptional regulator  58.74 
 
 
229 aa  274  1.0000000000000001e-72  Frankia sp. EAN1pec  Bacteria  normal  0.13217  normal 
 
 
-
 
NC_009380  Strop_2130  response regulator receiver  62.83 
 
 
252 aa  273  2.0000000000000002e-72  Salinispora tropica CNB-440  Bacteria  normal  0.539517  hitchhiker  0.00279069 
 
 
-
 
NC_009953  Sare_2277  two component transcriptional regulator  62.33 
 
 
248 aa  273  2.0000000000000002e-72  Salinispora arenicola CNS-205  Bacteria  normal  0.113906  normal  0.0109188 
 
 
-
 
NC_008699  Noca_3695  response regulator receiver  60.96 
 
 
236 aa  272  4.0000000000000004e-72  Nocardioides sp. JS614  Bacteria  normal  0.795948  n/a   
 
 
-
 
NC_013595  Sros_4916  response regulator receiver protein  60.35 
 
 
233 aa  271  8.000000000000001e-72  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3036  two component transcriptional regulator, winged helix family  60.7 
 
 
273 aa  269  2e-71  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.106658  normal 
 
 
-
 
NC_007777  Francci3_0308  two component transcriptional regulator  58.97 
 
 
239 aa  270  2e-71  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  58.7 
 
 
406 aa  268  4e-71  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6507  two component transcriptional regulator  59.23 
 
 
270 aa  265  4e-70  Frankia sp. EAN1pec  Bacteria  normal  0.0763131  normal  0.20607 
 
 
-
 
NC_013235  Namu_4408  two component transcriptional regulator, winged helix family  57.33 
 
 
230 aa  258  5.0000000000000005e-68  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0257  response regulator receiver  54.04 
 
 
241 aa  254  6e-67  Thermobifida fusca YX  Bacteria  normal  0.926332  n/a   
 
 
-
 
NC_009380  Strop_1418  response regulator receiver  56.7 
 
 
251 aa  252  4.0000000000000004e-66  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0582944 
 
 
-
 
NC_014151  Cfla_3340  two component transcriptional regulator, winged helix family  56.52 
 
 
258 aa  251  6e-66  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0454745 
 
 
-
 
NC_013947  Snas_5255  two component transcriptional regulator, winged helix family  59.46 
 
 
242 aa  249  2e-65  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0134474  normal 
 
 
-
 
NC_013093  Amir_0379  two component transcriptional regulator, winged helix family  57.27 
 
 
233 aa  248  8e-65  Actinosynnema mirum DSM 43827  Bacteria  normal  0.605912  n/a   
 
 
-
 
NC_009077  Mjls_3941  two component transcriptional regulator  55.41 
 
 
254 aa  246  2e-64  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0990172 
 
 
-
 
NC_008146  Mmcs_3926  two component transcriptional regulator  55.41 
 
 
254 aa  246  2e-64  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4000  two component transcriptional regulator  55.41 
 
 
254 aa  246  2e-64  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6496  two component transcriptional regulator  56.44 
 
 
231 aa  245  4.9999999999999997e-64  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00132974  normal  0.338684 
 
 
-
 
NC_009953  Sare_1384  two component transcriptional regulator  56.7 
 
 
252 aa  244  6e-64  Salinispora arenicola CNS-205  Bacteria  decreased coverage  0.00801111  normal  0.0620226 
 
 
-
 
NC_009565  TBFG_13797  two component transcriptional regulatory protein  57.14 
 
 
286 aa  244  9.999999999999999e-64  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.173423 
 
 
-
 
NC_008541  Arth_0655  two component transcriptional regulator  54.46 
 
 
246 aa  240  1e-62  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0804  two component transcriptional regulator, winged helix family  54.02 
 
 
246 aa  241  1e-62  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008726  Mvan_4429  two component transcriptional regulator  53.68 
 
 
250 aa  237  1e-61  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.133228  normal 
 
 
-
 
NC_013093  Amir_1724  two component transcriptional regulator, winged helix family  57.33 
 
 
243 aa  237  1e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2266  two component transcriptional regulator  54.11 
 
 
249 aa  235  3e-61  Mycobacterium gilvum PYR-GCK  Bacteria  decreased coverage  0.00896474  normal 
 
 
-
 
NC_009565  TBFG_11051  two component system transcriptional regulator trcR  50.87 
 
 
257 aa  230  1e-59  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4688  two component transcriptional regulator, winged helix family  56.89 
 
 
252 aa  230  1e-59  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2095  two component transcriptional regulator, winged helix family  53.33 
 
 
256 aa  229  2e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1823  two component transcriptional regulator, winged helix family  55.95 
 
 
241 aa  223  2e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.506413  normal 
 
 
-
 
NC_013131  Caci_6147  two component transcriptional regulator, winged helix family  49.36 
 
 
244 aa  222  3e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.200947 
 
 
-
 
NC_011729  PCC7424_2242  two component transcriptional regulator, winged helix family  46.43 
 
 
224 aa  218  6e-56  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.415885 
 
 
-
 
NC_012803  Mlut_22060  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  47.51 
 
 
254 aa  217  1e-55  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0729677  n/a   
 
 
-
 
NC_008726  Mvan_2296  two component transcriptional regulator  49.57 
 
 
255 aa  217  1e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.398969  normal  0.240289 
 
 
-
 
NC_009921  Franean1_5311  two component transcriptional regulator  46.69 
 
 
246 aa  216  2.9999999999999998e-55  Frankia sp. EAN1pec  Bacteria  normal  0.554395  normal  0.310406 
 
 
-
 
NC_008578  Acel_1595  two component transcriptional regulator  49.78 
 
 
227 aa  215  4e-55  Acidothermus cellulolyticus 11B  Bacteria  normal  0.526383  normal  0.570373 
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  52.91 
 
 
225 aa  215  5e-55  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0759  two component transcriptional regulator  46.19 
 
 
223 aa  213  1.9999999999999998e-54  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00128917  n/a   
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  50.67 
 
 
230 aa  212  4.9999999999999996e-54  Mycobacterium sp. JLS  Bacteria  normal  normal  0.354926 
 
 
-
 
NC_008146  Mmcs_4301  two component transcriptional regulator  50.67 
 
 
230 aa  212  4.9999999999999996e-54  Mycobacterium sp. MCS  Bacteria  normal  0.681825  n/a   
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  50.67 
 
 
230 aa  212  4.9999999999999996e-54  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal 
 
 
-
 
NC_007644  Moth_1478  two component transcriptional regulator  48.02 
 
 
240 aa  211  7.999999999999999e-54  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000111909  normal 
 
 
-
 
NC_007604  Synpcc7942_1873  two component transcriptional regulator  47.06 
 
 
226 aa  211  1e-53  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1887  two component transcriptional regulator  49.33 
 
 
231 aa  210  2e-53  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.882564  normal  0.344123 
 
 
-
 
NC_008726  Mvan_4844  two component transcriptional regulator  49.78 
 
 
231 aa  209  3e-53  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.312171 
 
 
-
 
NC_009972  Haur_2799  two component transcriptional regulator  45.89 
 
 
236 aa  209  4e-53  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000368356  n/a   
 
 
-
 
NC_011830  Dhaf_1005  two component transcriptional regulator, winged helix family  47.51 
 
 
227 aa  208  7e-53  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000255449  n/a   
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  45.57 
 
 
239 aa  207  1e-52  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  45.57 
 
 
239 aa  207  1e-52  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  45.57 
 
 
239 aa  207  1e-52  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  45.57 
 
 
239 aa  207  1e-52  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  45.57 
 
 
239 aa  207  1e-52  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  45.57 
 
 
239 aa  207  1e-52  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_014158  Tpau_3286  two component transcriptional regulator, winged helix family  49.55 
 
 
228 aa  207  1e-52  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.167791  n/a   
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  45.73 
 
 
239 aa  207  1e-52  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000130788 
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  45.73 
 
 
239 aa  207  1e-52  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  44.87 
 
 
239 aa  206  2e-52  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0737  two component transcriptional regulator, winged helix family  44.64 
 
 
224 aa  206  3e-52  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_0280  two component transcriptional regulator, winged helix family  45.95 
 
 
225 aa  206  3e-52  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10999  two component response transcriptional regulatory protein MprA  48.66 
 
 
230 aa  206  4e-52  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000188235  normal  0.671639 
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  44.83 
 
 
239 aa  204  1e-51  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  45.06 
 
 
238 aa  204  1e-51  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2194  DNA-binding response regulator  45.74 
 
 
227 aa  203  2e-51  Bacillus cereus B4264  Bacteria  hitchhiker  0.00702475  n/a   
 
 
-
 
NC_005945  BAS2056  DNA-binding response regulator  45.74 
 
 
227 aa  202  3e-51  Bacillus anthracis str. Sterne  Bacteria  normal  0.413172  n/a   
 
 
-
 
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