10 homologs were found in PanDaTox collection
for query gene Ssol_0005 on replicon CP001800
Organism: Sulfolobus solfataricus 98/2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001800  Ssol_0005  Conserved TM helix repeat-containing protein  100 
 
 
281 aa  527  1e-149  Sulfolobus solfataricus 98/2  Archaea  normal  0.152576  n/a   
 
 
-
 
NC_009440  Msed_1227  TM helix repeat-containing protein  51.01 
 
 
254 aa  194  1e-48  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_009954  Cmaq_0481  TM helix repeat-containing protein  44.75 
 
 
266 aa  169  5e-41  Caldivirga maquilingensis IC-167  Archaea  normal  0.087662  hitchhiker  0.00285155 
 
 
-
 
NC_010525  Tneu_0752  TM helix repeat-containing protein  32.75 
 
 
279 aa  108  1e-22  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
NC_009073  Pcal_0558  TM helix repeat-containing protein  32.75 
 
 
281 aa  107  2e-22  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_009376  Pars_0737  TM helix repeat-containing protein  32.35 
 
 
279 aa  105  1e-21  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.36808  normal  0.444649 
 
 
-
 
NC_008701  Pisl_1736  TM helix repeat-containing protein  31.88 
 
 
279 aa  104  2e-21  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1056  TM helix repeat-containing protein  25.57 
 
 
229 aa  53.5  0.000004  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0376279  normal  0.186599 
 
 
-
 
NC_009712  Mboo_1704  TM helix repeat-containing protein  26.79 
 
 
228 aa  51.2  0.00002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.35242  normal 
 
 
-
 
NC_009712  Mboo_0334  TM helix repeat-containing protein  22.88 
 
 
228 aa  50.1  0.00004  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.172175  normal 
 
 
-
 
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