More than 300 homologs were found in PanDaTox collection
for query gene Ssed_3705 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  68.76 
 
 
541 aa  682    Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  61 
 
 
541 aa  655    Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_008577  Shewana3_3173  methyl-accepting chemotaxis sensory transducer  68.39 
 
 
541 aa  685    Shewanella sp. ANA-3  Bacteria  normal  0.0131988  normal 
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  66.17 
 
 
541 aa  663    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  72.64 
 
 
541 aa  764    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1015  methyl-accepting chemotaxis sensory transducer  66.91 
 
 
541 aa  664    Shewanella baltica OS155  Bacteria  unclonable  0.0000000434326  n/a   
 
 
-
 
NC_011663  Sbal223_3274  methyl-accepting chemotaxis sensory transducer  66.91 
 
 
541 aa  664    Shewanella baltica OS223  Bacteria  normal  0.0175031  normal  0.083895 
 
 
-
 
NC_009665  Shew185_1084  methyl-accepting chemotaxis sensory transducer  66.91 
 
 
541 aa  664    Shewanella baltica OS185  Bacteria  hitchhiker  0.000100295  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  100 
 
 
541 aa  1083    Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  66.85 
 
 
541 aa  716    Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  67.28 
 
 
541 aa  671    Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  66.91 
 
 
541 aa  690    Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  67.28 
 
 
541 aa  671    Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_009997  Sbal195_1117  methyl-accepting chemotaxis sensory transducer  66.73 
 
 
541 aa  662    Shewanella baltica OS195  Bacteria  normal  0.0100073  normal  0.0339889 
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  62.48 
 
 
542 aa  636    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  36.8 
 
 
543 aa  306  5.0000000000000004e-82  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  35.82 
 
 
541 aa  295  1e-78  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.58 
 
 
636 aa  271  2e-71  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  43.52 
 
 
640 aa  268  2.9999999999999995e-70  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  43.06 
 
 
541 aa  267  4e-70  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  43.82 
 
 
773 aa  263  4.999999999999999e-69  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
620 aa  262  1e-68  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
637 aa  261  2e-68  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  43.32 
 
 
716 aa  259  1e-67  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  37.83 
 
 
541 aa  258  3e-67  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
522 aa  256  7e-67  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  44.85 
 
 
552 aa  255  1.0000000000000001e-66  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  39.32 
 
 
712 aa  254  2.0000000000000002e-66  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  44.31 
 
 
624 aa  254  3e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  43.87 
 
 
552 aa  254  3e-66  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  39.56 
 
 
712 aa  254  3e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  43.42 
 
 
650 aa  253  4.0000000000000004e-66  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  42.09 
 
 
564 aa  253  4.0000000000000004e-66  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  40.67 
 
 
713 aa  253  6e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  40.58 
 
 
642 aa  253  8.000000000000001e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  40.48 
 
 
642 aa  251  3e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  38.44 
 
 
541 aa  248  2e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  41.5 
 
 
541 aa  248  2e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_010002  Daci_3750  methyl-accepting chemotaxis sensory transducer  32.42 
 
 
533 aa  248  2e-64  Delftia acidovorans SPH-1  Bacteria  normal  0.13147  normal  0.360613 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  37.37 
 
 
541 aa  248  3e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  42.2 
 
 
647 aa  247  4e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  44.01 
 
 
638 aa  247  4.9999999999999997e-64  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  37.67 
 
 
621 aa  246  4.9999999999999997e-64  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  43.75 
 
 
637 aa  246  6e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
560 aa  246  8e-64  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
638 aa  245  9.999999999999999e-64  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
638 aa  246  9.999999999999999e-64  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.69 
 
 
523 aa  246  9.999999999999999e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  38.25 
 
 
620 aa  244  3e-63  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
544 aa  244  3e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
620 aa  243  3.9999999999999997e-63  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  40.47 
 
 
674 aa  244  3.9999999999999997e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  41.89 
 
 
681 aa  244  3.9999999999999997e-63  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
647 aa  243  5e-63  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  43.41 
 
 
638 aa  243  7e-63  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
620 aa  242  1e-62  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
411 aa  242  1e-62  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  38.74 
 
 
640 aa  241  2e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  40 
 
 
629 aa  241  2.9999999999999997e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  40.84 
 
 
573 aa  241  2.9999999999999997e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
739 aa  240  4e-62  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  40.39 
 
 
541 aa  240  4e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  35.15 
 
 
573 aa  240  4e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  35.99 
 
 
541 aa  239  5.999999999999999e-62  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  35.99 
 
 
541 aa  239  6.999999999999999e-62  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  42.2 
 
 
647 aa  239  8e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  40.86 
 
 
539 aa  239  9e-62  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
647 aa  239  1e-61  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  39.39 
 
 
541 aa  238  2e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  41.3 
 
 
676 aa  238  2e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
547 aa  236  6e-61  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_010501  PputW619_0444  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
647 aa  236  9e-61  Pseudomonas putida W619  Bacteria  normal  0.414929  normal 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  35.71 
 
 
541 aa  235  1.0000000000000001e-60  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  41.29 
 
 
638 aa  236  1.0000000000000001e-60  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
541 aa  234  2.0000000000000002e-60  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  37.76 
 
 
638 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  34.79 
 
 
546 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  37.75 
 
 
619 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  39.11 
 
 
541 aa  234  2.0000000000000002e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  41.85 
 
 
653 aa  235  2.0000000000000002e-60  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  34.57 
 
 
639 aa  235  2.0000000000000002e-60  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  40.74 
 
 
633 aa  234  3e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  37.5 
 
 
541 aa  234  3e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  40.83 
 
 
553 aa  233  6e-60  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  40 
 
 
548 aa  233  6e-60  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
541 aa  233  7.000000000000001e-60  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  38.66 
 
 
541 aa  232  1e-59  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  38.66 
 
 
541 aa  231  2e-59  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  37.79 
 
 
541 aa  232  2e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
620 aa  231  2e-59  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  36.89 
 
 
546 aa  231  2e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0756  methyl-accepting chemotaxis protein  42.69 
 
 
558 aa  231  2e-59  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  45.51 
 
 
438 aa  232  2e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
568 aa  231  2e-59  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  39.61 
 
 
546 aa  231  2e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  40 
 
 
652 aa  231  2e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  38.6 
 
 
620 aa  231  2e-59  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
640 aa  231  3e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  38.12 
 
 
634 aa  230  4e-59  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  46.13 
 
 
679 aa  230  5e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
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