11 homologs were found in PanDaTox collection
for query gene Ssed_1875 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_1875  hypothetical protein  100 
 
 
134 aa  271  2.0000000000000002e-72  Shewanella sediminis HAW-EB3  Bacteria  normal  0.989179  decreased coverage  0.0000000115207 
 
 
-
 
NC_009901  Spea_2545  hypothetical protein  65.41 
 
 
137 aa  166  7e-41  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1553  hypothetical protein  48.12 
 
 
160 aa  133  9e-31  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1173  hypothetical protein  36.26 
 
 
160 aa  48.9  0.00002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0433  hypothetical protein  37.84 
 
 
158 aa  48.5  0.00003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1161  hypothetical protein  37.84 
 
 
158 aa  48.5  0.00003  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0497  hypothetical protein  37.84 
 
 
158 aa  48.5  0.00003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_1714  hypothetical protein  37.5 
 
 
157 aa  47  0.00008  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1686  hypothetical protein  37.5 
 
 
157 aa  46.6  0.0001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.977297  normal 
 
 
-
 
NC_010084  Bmul_1496  hypothetical protein  36.84 
 
 
157 aa  44.7  0.0005  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0264401 
 
 
-
 
NC_007510  Bcep18194_A5073  hypothetical protein  35.23 
 
 
157 aa  44.3  0.0006  Burkholderia sp. 383  Bacteria  normal  0.227505  normal 
 
 
-
 
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