17 homologs were found in PanDaTox collection
for query gene Ssed_0768 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009831  Ssed_0768  phage shock protein C, PspC  100 
 
 		 72 aa  146  1.0000000000000001e-34  Shewanella sediminis HAW-EB3  Bacteria  normal  1  unclonable  0.0000000000435177 
 
 
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NC_010506  Swoo_4201  phage shock protein C, PspC  69.01 
 
 		 73 aa  109  2.0000000000000002e-23  Shewanella woodyi ATCC 51908  Bacteria  normal  0.150458  hitchhiker  0.000256968 
 
 
-
 
NC_009092  Shew_0538  phage shock protein C, PspC  68.66 
 
 		 68 aa  100  8e-21  Shewanella loihica PV-4  Bacteria  normal  0.035155  normal  0.595075 
 
 
-
 
NC_009901  Spea_3568  phage shock protein C, PspC  63.64 
 
 		 66 aa  90.1  8e-18  Shewanella pealeana ATCC 700345  Bacteria  normal  0.389795  n/a   
 
 
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NC_008700  Sama_3053  hypothetical protein  63.16 
 
 		 65 aa  79  0.00000000000002  Shewanella amazonensis SB2B  Bacteria  normal  0.575267  normal  0.411862 
 
 
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NC_009052  Sbal_3583  phage shock protein C, PspC  53.12 
 
 		 66 aa  75.1  0.0000000000003  Shewanella baltica OS155  Bacteria  hitchhiker  0.00109903  n/a   
 
 
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NC_011663  Sbal223_0801  phage shock protein C, PspC  53.12 
 
 		 66 aa  74.7  0.0000000000004  Shewanella baltica OS223  Bacteria  normal  0.0620019  hitchhiker  0.000000297579 
 
 
-
 
NC_009997  Sbal195_0808  phage shock protein C, PspC  53.12 
 
 		 66 aa  74.7  0.0000000000004  Shewanella baltica OS195  Bacteria  normal  0.0603929  normal  0.618648 
 
 
-
 
NC_009665  Shew185_0776  phage shock protein C, PspC  53.12 
 
 		 66 aa  74.7  0.0000000000004  Shewanella baltica OS185  Bacteria  normal  0.0944967  n/a   
 
 
-
 
NC_007954  Sden_3230  hypothetical protein  50 
 
 		 66 aa  73.6  0.0000000000008  Shewanella denitrificans OS217  Bacteria  normal  0.315878  n/a   
 
 
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NC_008577  Shewana3_0720  phage shock protein C, PspC  50 
 
 		 66 aa  70.5  0.000000000008  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0000310188  hitchhiker  0.00124649 
 
 
-
 
NC_008321  Shewmr4_3241  phage shock protein C, PspC  50 
 
 		 66 aa  70.5  0.000000000008  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00824101  hitchhiker  0.00000791404 
 
 
-
 
NC_004347  SO_3909  hypothetical protein  51.56 
 
 		 66 aa  70.1  0.000000000009  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0763  phage shock protein C, PspC  46.15 
 
 		 66 aa  68.9  0.00000000002  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.000474411  n/a   
 
 
-
 
NC_008345  Sfri_3337  hypothetical protein  46.97 
 
 		 66 aa  68.9  0.00000000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.765416  n/a   
 
 
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NC_008322  Shewmr7_0748  phage shock protein C, PspC  48.44 
 
 		 66 aa  69.3  0.00000000002  Shewanella sp. MR-7  Bacteria  normal  0.522095  normal  0.0927188 
 
 
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NC_004116  SAG0734  phage shock protein C, putative  49.02 
 
 		 87 aa  45.4  0.0002  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
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