More than 300 homologs were found in PanDaTox collection
for query gene Sros_8653 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_8653  Arabinose efflux permease-like protein  100 
 
 
666 aa  1302    Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3291  drug resistance transporter, EmrB/QacA subfamily  56.25 
 
 
666 aa  627  1e-178  Conexibacter woesei DSM 14684  Bacteria  normal  0.47407  normal 
 
 
-
 
NC_014210  Ndas_4163  drug resistance transporter, EmrB/QacA subfamily  52.07 
 
 
676 aa  602  1.0000000000000001e-171  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8279  drug resistance transporter, EmrB/QacA subfamily  48.63 
 
 
680 aa  580  1e-164  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270413  normal 
 
 
-
 
NC_013124  Afer_1036  drug resistance transporter, EmrB/QacA subfamily  53.65 
 
 
672 aa  543  1e-153  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2786  EmrB/QacA family drug resistance transporter  47.63 
 
 
682 aa  543  1e-153  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2756  EmrB/QacA family drug resistance transporter  47.78 
 
 
682 aa  545  1e-153  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2800  EmrB/QacA family drug resistance transporter  47.78 
 
 
682 aa  545  1e-153  Mycobacterium sp. KMS  Bacteria  normal  0.375758  normal  0.713659 
 
 
-
 
NC_007777  Francci3_0717  EmrB/QacA family drug resistance transporter  59.45 
 
 
558 aa  536  1e-151  Frankia sp. CcI3  Bacteria  normal  normal  0.770491 
 
 
-
 
NC_013947  Snas_2318  drug resistance transporter, EmrB/QacA subfamily  45.04 
 
 
678 aa  530  1e-149  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3321  EmrB/QacA family drug resistance transporter  45.79 
 
 
650 aa  515  1.0000000000000001e-145  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.157992  normal  0.0742968 
 
 
-
 
NC_008726  Mvan_3042  EmrB/QacA family drug resistance transporter  47.22 
 
 
685 aa  512  1e-143  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.141693  normal 
 
 
-
 
NC_013093  Amir_4864  drug resistance transporter, EmrB/QacA subfamily  45.67 
 
 
685 aa  508  9.999999999999999e-143  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3817  drug resistance transporter, EmrB/QacA subfamily  45.55 
 
 
697 aa  498  1e-139  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.00137036  normal  0.060926 
 
 
-
 
NC_008578  Acel_1890  EmrB/QacA family drug resistance transporter  52.6 
 
 
569 aa  469  1.0000000000000001e-131  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3709  EmrB/QacA family drug resistance transporter  48.26 
 
 
522 aa  456  1e-127  Salinispora tropica CNB-440  Bacteria  normal  0.486595  normal 
 
 
-
 
NC_014165  Tbis_1314  EmrB/QacA subfamily drug resistance transporter  51.04 
 
 
535 aa  456  1e-127  Thermobispora bispora DSM 43833  Bacteria  decreased coverage  0.00952843  normal  0.308238 
 
 
-
 
NC_008699  Noca_2169  EmrB/QacA family drug resistance transporter  50.4 
 
 
554 aa  452  1.0000000000000001e-126  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0043  EmrB/QacA family drug resistance transporter  50.95 
 
 
504 aa  449  1e-125  Enterobacter sp. 638  Bacteria  normal  0.258133  normal  0.869121 
 
 
-
 
NC_013947  Snas_5185  drug resistance transporter, EmrB/QacA subfamily  49.26 
 
 
525 aa  446  1.0000000000000001e-124  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.804488  normal  0.490544 
 
 
-
 
NC_007511  Bcep18194_B1157  EmrB/QacA family drug resistance transporter  51.4 
 
 
504 aa  441  9.999999999999999e-123  Burkholderia sp. 383  Bacteria  normal  0.153598  normal  0.545064 
 
 
-
 
NC_008061  Bcen_3702  EmrB/QacA family drug resistance transporter  51.16 
 
 
509 aa  436  1e-121  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2480  EmrB/QacA family drug resistance transporter  48.41 
 
 
504 aa  436  1e-121  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4666  EmrB/QacA family drug resistance transporter  51.16 
 
 
509 aa  436  1e-121  Burkholderia cenocepacia HI2424  Bacteria  normal  0.481677  normal  0.435005 
 
 
-
 
NC_010676  Bphyt_4890  drug resistance transporter, EmrB/QacA subfamily  48.84 
 
 
513 aa  435  1e-120  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0326454  normal  0.212856 
 
 
-
 
NC_007435  BURPS1710b_A2533  EmrB/QacA family drug resistance transporter  52.43 
 
 
519 aa  433  1e-120  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1465  EmrB/QacA family drug resistance transporter  51.8 
 
 
504 aa  435  1e-120  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1779  major facilitator superfamily multidrug efflux transporter  48.81 
 
 
520 aa  435  1e-120  Burkholderia xenovorans LB400  Bacteria  normal  0.38448  unclonable  0.00000000116602 
 
 
-
 
NC_010515  Bcenmc03_5634  EmrB/QacA family drug resistance transporter  50.85 
 
 
504 aa  432  1e-120  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.327669 
 
 
-
 
NC_008391  Bamb_4056  EmrB/QacA family drug resistance transporter  52.06 
 
 
509 aa  435  1e-120  Burkholderia ambifaria AMMD  Bacteria  normal  0.010273  normal  0.647251 
 
 
-
 
NC_009079  BMA10247_A1016  EmrB/QacA family drug resistance transporter  52.01 
 
 
504 aa  429  1e-119  Burkholderia mallei NCTC 10247  Bacteria  normal  0.80336  n/a   
 
 
-
 
NC_006349  BMAA1299  EmrB/QacA family drug resistance transporter  52.22 
 
 
504 aa  431  1e-119  Burkholderia mallei ATCC 23344  Bacteria  normal  0.144452  n/a   
 
 
-
 
NC_010623  Bphy_3357  EmrB/QacA family drug resistance transporter  50 
 
 
505 aa  432  1e-119  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.000000299723 
 
 
-
 
NC_009075  BURPS668_A1356  EmrB/QacA family drug resistance transporter  52.22 
 
 
504 aa  430  1e-119  Burkholderia pseudomallei 668  Bacteria  normal  0.991135  n/a   
 
 
-
 
NC_010552  BamMC406_4512  EmrB/QacA family drug resistance transporter  51.65 
 
 
504 aa  432  1e-119  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008784  BMASAVP1_0279  EmrB/QacA family drug resistance transporter  52.22 
 
 
504 aa  431  1e-119  Burkholderia mallei SAVP1  Bacteria  normal  0.2584  n/a   
 
 
-
 
NC_008835  BMA10229_0550  EmrB/QacA family drug resistance transporter  52.01 
 
 
504 aa  429  1e-119  Burkholderia mallei NCTC 10229  Bacteria  normal  0.976745  n/a   
 
 
-
 
NC_013131  Caci_0662  drug resistance transporter, EmrB/QacA subfamily  48.24 
 
 
525 aa  427  1e-118  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A1278  EmrB/QacA family drug resistance transporter  52.22 
 
 
504 aa  428  1e-118  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3285  EmrB/QacA family drug resistance transporter  51.26 
 
 
501 aa  428  1e-118  Pseudomonas putida GB-1  Bacteria  normal  normal  0.791434 
 
 
-
 
NC_013595  Sros_3945  EmrB/QacA family drug resistance transporter  45.47 
 
 
528 aa  425  1e-117  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00181565  hitchhiker  0.00620132 
 
 
-
 
NC_009953  Sare_4090  EmrB/QacA family drug resistance transporter  48.48 
 
 
523 aa  422  1e-116  Salinispora arenicola CNS-205  Bacteria  normal  0.588022  normal  0.0353646 
 
 
-
 
NC_013521  Sked_05770  drug resistance transporter, EmrB/QacA subfamily  47.14 
 
 
528 aa  422  1e-116  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.148276  normal 
 
 
-
 
NC_010086  Bmul_4024  EmrB/QacA family drug resistance transporter  49.25 
 
 
509 aa  417  9.999999999999999e-116  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.179138  normal  0.623334 
 
 
-
 
NC_013947  Snas_6232  drug resistance transporter, EmrB/QacA subfamily  48.28 
 
 
535 aa  418  9.999999999999999e-116  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0275  drug resistance transporter, EmrB/QacA subfamily  45.17 
 
 
539 aa  414  1e-114  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.269312  normal  0.0148555 
 
 
-
 
NC_013595  Sros_6564  EmrB/QacA family drug resistance transporter  45.82 
 
 
526 aa  411  1e-113  Streptosporangium roseum DSM 43021  Bacteria  normal  0.569718  normal  0.0165949 
 
 
-
 
NC_009565  TBFG_11905  integral membrane protein  41.05 
 
 
687 aa  404  1e-111  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2050  EmrB/QacA family drug resistance transporter  45.19 
 
 
516 aa  386  1e-106  Streptosporangium roseum DSM 43021  Bacteria  normal  0.851205  normal 
 
 
-
 
NC_008148  Rxyl_0614  EmrB/QacA family drug resistance transporter  41.55 
 
 
607 aa  387  1e-106  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.222069  n/a   
 
 
-
 
NC_007333  Tfu_2988  EmrB/QacA family drug resistance transporter  47.37 
 
 
514 aa  382  1e-105  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1250  drug resistance transporter, EmrB/QacA subfamily  42.35 
 
 
567 aa  380  1e-104  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000544425 
 
 
-
 
NC_013174  Jden_0388  drug resistance transporter, EmrB/QacA subfamily  44.38 
 
 
532 aa  373  1e-102  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_1179  EmrB/QacA family drug resistance transporter  41.6 
 
 
538 aa  374  1e-102  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00903391  n/a   
 
 
-
 
NC_012669  Bcav_2560  drug resistance transporter, EmrB/QacA subfamily  41.95 
 
 
557 aa  367  1e-100  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.577395  normal  0.137403 
 
 
-
 
NC_013174  Jden_0391  drug resistance transporter, EmrB/QacA subfamily  42.04 
 
 
530 aa  364  2e-99  Jonesia denitrificans DSM 20603  Bacteria  normal  0.979828  normal 
 
 
-
 
NC_013521  Sked_23860  drug resistance transporter, EmrB/QacA subfamily  42.51 
 
 
572 aa  364  3e-99  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0809765  normal 
 
 
-
 
NC_013526  Tter_2612  drug resistance transporter, EmrB/QacA subfamily  41.33 
 
 
565 aa  363  4e-99  Thermobaculum terrenum ATCC BAA-798  Bacteria  unclonable  0.000000000331464  n/a   
 
 
-
 
NC_013093  Amir_0306  drug resistance transporter, EmrB/QacA subfamily  42.77 
 
 
555 aa  360  6e-98  Actinosynnema mirum DSM 43827  Bacteria  normal  0.509937  n/a   
 
 
-
 
NC_009664  Krad_2535  drug resistance transporter, EmrB/QacA subfamily  42.26 
 
 
575 aa  358  1.9999999999999998e-97  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4394  major facilitator superfamily MFS_1  42.58 
 
 
538 aa  358  2.9999999999999997e-97  Thermomonospora curvata DSM 43183  Bacteria  normal  0.497016  n/a   
 
 
-
 
NC_013169  Ksed_14720  drug resistance transporter, EmrB/QacA subfamily  44.37 
 
 
524 aa  356  8.999999999999999e-97  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.584953  normal  0.369508 
 
 
-
 
NC_013235  Namu_0763  drug resistance transporter, EmrB/QacA subfamily  40.71 
 
 
641 aa  355  2e-96  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_08840  drug resistance transporter, EmrB/QacA subfamily  41.03 
 
 
592 aa  354  2e-96  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0241  EmrB/QacA family drug resistance transporter  41.75 
 
 
523 aa  352  1e-95  Caulobacter sp. K31  Bacteria  normal  0.232516  normal 
 
 
-
 
NC_013131  Caci_5139  drug resistance transporter, EmrB/QacA subfamily  43.91 
 
 
519 aa  352  1e-95  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.306727  normal 
 
 
-
 
NC_014158  Tpau_0550  tRNA-guanine transglycosylase, various specificities  40.31 
 
 
1062 aa  350  4e-95  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5285  major facilitator superfamily MFS_1  45.06 
 
 
491 aa  350  4e-95  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_1424  major facilitator family transporter  38.48 
 
 
537 aa  350  5e-95  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000410629  n/a   
 
 
-
 
NC_013530  Xcel_2111  drug resistance transporter, EmrB/QacA subfamily  41.63 
 
 
528 aa  350  6e-95  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.534364  n/a   
 
 
-
 
NC_013441  Gbro_4024  drug resistance transporter, EmrB/QacA subfamily  39.39 
 
 
562 aa  348  1e-94  Gordonia bronchialis DSM 43247  Bacteria  normal  0.736768  n/a   
 
 
-
 
NC_013204  Elen_0210  drug resistance transporter, EmrB/QacA subfamily  41.92 
 
 
592 aa  348  1e-94  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.852197 
 
 
-
 
NC_009253  Dred_0326  EmrB/QacA family drug resistance transporter  43.64 
 
 
539 aa  346  6e-94  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4795  drug resistance transporter, EmrB/QacA subfamily  41.91 
 
 
534 aa  340  7e-92  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.29039  n/a   
 
 
-
 
NC_009664  Krad_4278  drug resistance transporter, EmrB/QacA subfamily  41.06 
 
 
685 aa  339  9e-92  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00129972  normal  0.114111 
 
 
-
 
NC_013411  GYMC61_3298  drug resistance transporter, EmrB/QacA subfamily  40.59 
 
 
538 aa  338  1.9999999999999998e-91  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_3147  drug resistance transporter, EmrB/QacA subfamily  37.33 
 
 
541 aa  336  7.999999999999999e-91  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4672  drug resistance transporter, EmrB/QacA subfamily  40.59 
 
 
593 aa  334  3e-90  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.349364  n/a   
 
 
-
 
NC_009664  Krad_3513  drug resistance transporter, EmrB/QacA subfamily  39.92 
 
 
850 aa  333  5e-90  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1015  EmrB/QacA family drug resistance transporter  37.57 
 
 
561 aa  332  1e-89  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1011  drug resistance transporter, EmrB/QacA subfamily  39.79 
 
 
522 aa  328  2.0000000000000001e-88  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0577  EmrB/QacA family drug resistance transporter  39.59 
 
 
537 aa  326  8.000000000000001e-88  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0295  EmrB/QacA family drug resistance transporter  44.61 
 
 
565 aa  326  9e-88  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_23370  arabinose efflux permease family protein  39.26 
 
 
535 aa  324  3e-87  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.517259  normal 
 
 
-
 
NC_012803  Mlut_01490  drug resistance transporter, EmrB/QacA subfamily  39.52 
 
 
624 aa  324  3e-87  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0331  EmrB/QacA subfamily drug resistance transporter  38.22 
 
 
571 aa  322  9.999999999999999e-87  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_19560  arabinose efflux permease family protein  39.54 
 
 
552 aa  320  3.9999999999999996e-86  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.301888  normal  0.424094 
 
 
-
 
NC_011772  BCG9842_B4643  putative multidrug resistance protein  39.38 
 
 
537 aa  321  3.9999999999999996e-86  Bacillus cereus G9842  Bacteria  hitchhiker  0.00119486  unclonable  1.5256899999999999e-25 
 
 
-
 
NC_011725  BCB4264_A0695  putative multidrug resistance protein  39.18 
 
 
537 aa  320  5e-86  Bacillus cereus B4264  Bacteria  normal  0.0299481  n/a   
 
 
-
 
NC_013510  Tcur_4396  drug resistance transporter, EmrB/QacA subfamily  38.57 
 
 
526 aa  318  2e-85  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4211  EmrB/QacA family drug resistance transporter  42.65 
 
 
491 aa  317  4e-85  Streptosporangium roseum DSM 43021  Bacteria  normal  0.539583  hitchhiker  0.00153857 
 
 
-
 
NC_008010  Dgeo_2674  EmrB/QacA family drug resistance transporter  41.4 
 
 
684 aa  317  5e-85  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3829  EmrB/QacA family drug resistance transporter  35.73 
 
 
513 aa  316  9e-85  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.000236934  n/a   
 
 
-
 
NC_014211  Ndas_5486  major facilitator superfamily MFS_1  38.19 
 
 
584 aa  316  9.999999999999999e-85  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0573143  normal 
 
 
-
 
NC_003909  BCE_0731  EmrB/QacA family drug resistance transporter  39.28 
 
 
537 aa  315  9.999999999999999e-85  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4620  drug resistance transporter, EmrB/QacA subfamily  38.67 
 
 
566 aa  315  9.999999999999999e-85  Gordonia bronchialis DSM 43247  Bacteria  normal  0.226241  n/a   
 
 
-
 
NC_011658  BCAH187_A0792  putative multidrug resistance protein  39.7 
 
 
537 aa  316  9.999999999999999e-85  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000149033  n/a   
 
 
-
 
NC_011773  BCAH820_0720  putative multidrug resistance protein  39.7 
 
 
537 aa  315  1.9999999999999998e-84  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  3.55065e-20 
 
 
-
 
NC_005957  BT9727_0574  multidrug resistance protein B; sugar (and other) transporter  39.7 
 
 
537 aa  315  1.9999999999999998e-84  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0573  multidrug-efflux transporter  39.7 
 
 
537 aa  315  1.9999999999999998e-84  Bacillus cereus E33L  Bacteria  normal  0.0295676  n/a   
 
 
-
 
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