More than 300 homologs were found in PanDaTox collection
for query gene Sros_7448 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_7448  ABC-type dipeptide transport system periplasmic component-like protein  100 
 
 
626 aa  1263    Streptosporangium roseum DSM 43021  Bacteria  normal  0.338891  normal 
 
 
-
 
NC_014210  Ndas_0631  extracellular solute-binding protein family 5  38.15 
 
 
631 aa  403  1e-111  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  decreased coverage  0.00116155  normal  0.250691 
 
 
-
 
NC_013093  Amir_3466  extracellular solute-binding protein family 5  41.08 
 
 
596 aa  405  1e-111  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0853012  n/a   
 
 
-
 
NC_013595  Sros_2082  ABC transporter, binding protein component  39.77 
 
 
605 aa  389  1e-107  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.645423 
 
 
-
 
NC_013947  Snas_3196  extracellular solute-binding protein family 5  38.9 
 
 
600 aa  381  1e-104  Stackebrandtia nassauensis DSM 44728  Bacteria  hitchhiker  0.0000171923  unclonable  0.0000000000413572 
 
 
-
 
NC_013131  Caci_5370  extracellular solute-binding protein family 5  40.15 
 
 
629 aa  377  1e-103  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.358498 
 
 
-
 
NC_013159  Svir_19910  ABC-type dipeptide transport system, periplasmic component  40.14 
 
 
589 aa  373  1e-102  Saccharomonospora viridis DSM 43017  Bacteria  hitchhiker  0.000984023  hitchhiker  0.000242655 
 
 
-
 
NC_007355  Mbar_A0930  oligopeptide ABC transporter, solute-binding protein  30.53 
 
 
588 aa  166  9e-40  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.476779  normal 
 
 
-
 
NC_010814  Glov_2097  4-phytase  28.21 
 
 
546 aa  163  8.000000000000001e-39  Geobacter lovleyi SZ  Bacteria  unclonable  0.00000775897  n/a   
 
 
-
 
NC_007484  Noc_2770  extracellular solute-binding protein  26.77 
 
 
618 aa  154  4e-36  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.000172881  n/a   
 
 
-
 
NC_011146  Gbem_2644  extracellular solute-binding protein family 5  25.97 
 
 
533 aa  150  7e-35  Geobacter bemidjiensis Bem  Bacteria  normal  0.0361873  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0207  extracellular solute-binding protein  26.07 
 
 
567 aa  150  9e-35  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0265  oligopeptide-binding protein OppA  25.92 
 
 
566 aa  149  2.0000000000000003e-34  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0247  oligopeptide ABC transporter, substrate-binding protein, putative  25.7 
 
 
567 aa  147  7.0000000000000006e-34  Bacillus cereus ATCC 10987  Bacteria  normal  0.460021  n/a   
 
 
-
 
NC_010718  Nther_0477  extracellular solute-binding protein family 5  26.09 
 
 
573 aa  146  9e-34  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0218  oligopeptide ABC transporter oligopeptide-binding protein  28.48 
 
 
559 aa  145  1e-33  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0245  oligopeptide-binding protein OppA  26.8 
 
 
575 aa  145  2e-33  Bacillus cereus B4264  Bacteria  normal  0.0551474  n/a   
 
 
-
 
NC_011772  BCG9842_B5080  oligopeptide-binding protein OppA  26.8 
 
 
575 aa  145  2e-33  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_0205  oligopeptide ABC transporter, oligopeptide-binding protein  26.74 
 
 
575 aa  144  4e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1234  extracellular solute-binding protein  27.01 
 
 
538 aa  144  5e-33  Geobacter metallireducens GS-15  Bacteria  normal  0.871598  normal  0.318753 
 
 
-
 
NC_012918  GM21_1590  extracellular solute-binding protein family 5  25.75 
 
 
534 aa  144  5e-33  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_0310  extracellular solute-binding protein family 5  28.05 
 
 
509 aa  144  5e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0209  oligopeptide ABC transporter, oligopeptide-binding protein  28.43 
 
 
575 aa  144  6e-33  Bacillus cereus E33L  Bacteria  normal  0.019765  n/a   
 
 
-
 
NC_008609  Ppro_2655  extracellular solute-binding protein  26.65 
 
 
539 aa  144  7e-33  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.0000125789  n/a   
 
 
-
 
NC_002939  GSU1433  peptide ABC transporter, periplasmic peptide-binding protein  26.77 
 
 
538 aa  143  8e-33  Geobacter sulfurreducens PCA  Bacteria  normal  0.948157  n/a   
 
 
-
 
NC_011773  BCAH820_0996  oligopeptide ABC transporter, oligopeptide-binding protein  27.1 
 
 
528 aa  143  8e-33  Bacillus cereus AH820  Bacteria  n/a    unclonable  4.41324e-61 
 
 
-
 
NC_008687  Pden_4285  extracellular solute-binding protein  28.17 
 
 
530 aa  143  8e-33  Paracoccus denitrificans PD1222  Bacteria  normal  0.261799  normal  0.839381 
 
 
-
 
NC_003909  BCE_0248  oligopeptide ABC transporter, oligopeptide-binding protein, putative  28.43 
 
 
575 aa  143  9e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0807  oligopeptide ABC transporter, oligopeptide-binding protein  27.1 
 
 
528 aa  143  9e-33  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000107652  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0803  extracellular solute-binding protein  27.1 
 
 
529 aa  143  9.999999999999999e-33  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.0000165149  n/a   
 
 
-
 
NC_003909  BCE_1000  oligopeptide ABC transporter, oligopeptide-binding protein  26.86 
 
 
529 aa  142  1.9999999999999998e-32  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0858  oligopeptide ABC transporter oligopeptide-binding protein  27.1 
 
 
528 aa  142  1.9999999999999998e-32  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.00000478589  n/a   
 
 
-
 
NC_011658  BCAH187_A0266  extracellular solute-binding protein family 5  26.99 
 
 
575 aa  142  1.9999999999999998e-32  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0231  oligopeptide ABC transporter oligopeptide-binding protein  28.22 
 
 
555 aa  142  1.9999999999999998e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0908  oligopeptide ABC transporter oligopeptide-binding protein  27.1 
 
 
528 aa  142  1.9999999999999998e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.00000813115  n/a   
 
 
-
 
NC_011773  BCAH820_0241  putative oligopeptide ABC transporter, oligopeptide-binding protein  28.22 
 
 
575 aa  141  3e-32  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007498  Pcar_1870  dipeptide transport protein  26.92 
 
 
540 aa  141  3.9999999999999997e-32  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2595  putative extracellular solute-binding protein  28.44 
 
 
507 aa  140  6e-32  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00975919 
 
 
-
 
NC_011772  BCG9842_B4386  oligopeptide ABC transporter, oligopeptide-binding protein  27.1 
 
 
529 aa  140  7e-32  Bacillus cereus G9842  Bacteria  normal  0.775513  hitchhiker  3.14637e-22 
 
 
-
 
NC_010184  BcerKBAB4_0208  extracellular solute-binding protein  26.82 
 
 
575 aa  140  7.999999999999999e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0945  oligopeptide ABC transporter, oligopeptide-binding protein  27.1 
 
 
528 aa  140  1e-31  Bacillus cereus B4264  Bacteria  hitchhiker  0.00751792  n/a   
 
 
-
 
NC_009674  Bcer98_0219  extracellular solute-binding protein  26.34 
 
 
575 aa  139  1e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0106  extracellular solute-binding protein family 5  28.04 
 
 
533 aa  139  1e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0909337  n/a   
 
 
-
 
NC_007355  Mbar_A3566  dipeptide/oligopeptide-binding protein  25.54 
 
 
562 aa  139  1e-31  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.672958  normal  0.0864129 
 
 
-
 
NC_005957  BT9727_0822  oligopeptide ABC transporter, oligopeptide-binding protein  26.86 
 
 
528 aa  138  3.0000000000000003e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00000000000176887  n/a   
 
 
-
 
NC_007778  RPB_0132  extracellular solute-binding protein  26.79 
 
 
532 aa  137  6.0000000000000005e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0599  extracellular solute-binding protein family 5  23.77 
 
 
619 aa  137  9e-31  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.300607 
 
 
-
 
NC_010718  Nther_2798  extracellular solute-binding protein family 5  26.42 
 
 
557 aa  136  9.999999999999999e-31  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2270  extracellular solute-binding protein family 5  26.76 
 
 
580 aa  136  9.999999999999999e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2321  extracellular solute-binding protein family 5  26.76 
 
 
580 aa  136  9.999999999999999e-31  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.815964 
 
 
-
 
NC_002967  TDE0398  oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein  28.91 
 
 
527 aa  134  3.9999999999999996e-30  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5416  extracellular solute-binding protein  26.16 
 
 
534 aa  134  5e-30  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.604179 
 
 
-
 
NC_007512  Plut_1621  peptide ABC transporter, periplasmic peptide-binding protein  25.1 
 
 
594 aa  134  6.999999999999999e-30  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_0328  extracellular solute-binding protein family 5  27.75 
 
 
540 aa  134  6.999999999999999e-30  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1886  periplasmic dipeptide transport protein precursor  25.87 
 
 
525 aa  133  7.999999999999999e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  0.105927  normal  0.91526 
 
 
-
 
NC_012880  Dd703_1440  extracellular solute-binding protein family 5  27.02 
 
 
514 aa  133  7.999999999999999e-30  Dickeya dadantii Ech703  Bacteria  normal  0.136539  n/a   
 
 
-
 
NC_007802  Jann_3294  extracellular solute-binding protein  28.74 
 
 
573 aa  133  1.0000000000000001e-29  Jannaschia sp. CCS1  Bacteria  normal  normal  0.207016 
 
 
-
 
NC_011831  Cagg_1749  extracellular solute-binding protein family 5  26.84 
 
 
538 aa  132  2.0000000000000002e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.483604  normal 
 
 
-
 
NC_009380  Strop_1669  extracellular solute-binding protein  25.79 
 
 
510 aa  131  3e-29  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2906  extracellular solute-binding protein family 5  24.9 
 
 
574 aa  131  3e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1483  extracellular solute-binding protein  25.64 
 
 
551 aa  132  3e-29  Methylobacillus flagellatus KT  Bacteria  normal  0.228319  normal  0.152124 
 
 
-
 
NC_010505  Mrad2831_4764  extracellular solute-binding protein  26.5 
 
 
539 aa  131  4.0000000000000003e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2857  extracellular solute-binding protein  29.14 
 
 
593 aa  131  4.0000000000000003e-29  Serratia proteamaculans 568  Bacteria  normal  normal  0.358002 
 
 
-
 
NC_009483  Gura_2049  extracellular solute-binding protein  26.34 
 
 
540 aa  131  4.0000000000000003e-29  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5662  extracellular solute-binding protein  25.7 
 
 
544 aa  130  5.0000000000000004e-29  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.76313 
 
 
-
 
NC_011729  PCC7424_0337  extracellular solute-binding protein family 5  26.16 
 
 
581 aa  131  5.0000000000000004e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009620  Smed_5037  extracellular solute-binding protein  25.9 
 
 
534 aa  130  6e-29  Sinorhizobium medicae WSM419  Bacteria  normal  0.4089  normal  0.963466 
 
 
-
 
NC_011989  Avi_3875  ABC transporter substrate binding protein (oligopeptide)  27.44 
 
 
568 aa  130  8.000000000000001e-29  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0910  extracellular solute-binding protein  24.8 
 
 
555 aa  130  9.000000000000001e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.463169  n/a   
 
 
-
 
NC_011366  Rleg2_5668  extracellular solute-binding protein family 5  27.17 
 
 
557 aa  129  1.0000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5299  ABC transporter substrate binding protein (oligopeptide)  25.97 
 
 
556 aa  130  1.0000000000000001e-28  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1837  extracellular solute-binding protein family 5  27.58 
 
 
532 aa  130  1.0000000000000001e-28  Ralstonia pickettii 12D  Bacteria  normal  0.350378  normal  0.136519 
 
 
-
 
NC_011883  Ddes_1538  extracellular solute-binding protein family 5  23.78 
 
 
563 aa  129  1.0000000000000001e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  hitchhiker  0.000498479  n/a   
 
 
-
 
NC_007413  Ava_1563  extracellular solute-binding protein  26.34 
 
 
588 aa  129  2.0000000000000002e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  0.176735  normal  0.279007 
 
 
-
 
NC_010505  Mrad2831_0655  extracellular solute-binding protein  26.54 
 
 
540 aa  129  2.0000000000000002e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2087  extracellular solute-binding protein family 5  24.63 
 
 
522 aa  128  2.0000000000000002e-28  Ralstonia pickettii 12J  Bacteria  normal  0.159106  normal  0.621098 
 
 
-
 
NC_010682  Rpic_2161  extracellular solute-binding protein family 5  27.58 
 
 
532 aa  128  3e-28  Ralstonia pickettii 12J  Bacteria  normal  normal  0.283164 
 
 
-
 
NC_013595  Sros_1571  4-phytase  26.28 
 
 
510 aa  128  4.0000000000000003e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.624152  normal 
 
 
-
 
NC_008751  Dvul_1145  extracellular solute-binding protein  24.21 
 
 
565 aa  128  4.0000000000000003e-28  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.00838015  normal  0.546746 
 
 
-
 
NC_011894  Mnod_1769  extracellular solute-binding protein family 5  25.1 
 
 
589 aa  128  4.0000000000000003e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4290  extracellular solute-binding protein  26.04 
 
 
530 aa  127  6e-28  Verminephrobacter eiseniae EF01-2  Bacteria  hitchhiker  0.00787986  normal 
 
 
-
 
NC_011898  Ccel_0608  extracellular solute-binding protein family 5  24.06 
 
 
549 aa  127  8.000000000000001e-28  Clostridium cellulolyticum H10  Bacteria  normal  0.995783  n/a   
 
 
-
 
NC_009972  Haur_2397  extracellular solute-binding protein  28.41 
 
 
597 aa  127  9e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1439  extracellular solute-binding protein family 5  25.72 
 
 
540 aa  127  9e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3267  extracellular solute-binding protein family 5  27.77 
 
 
534 aa  126  9e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.485271  n/a   
 
 
-
 
NC_010001  Cphy_2000  extracellular solute-binding protein  24.51 
 
 
550 aa  126  1e-27  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1277  extracellular solute-binding protein  25.51 
 
 
598 aa  126  1e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0520  extracellular solute-binding protein family 5  26.03 
 
 
545 aa  126  1e-27  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1411  extracellular solute-binding protein  25.71 
 
 
559 aa  126  1e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0725  extracellular solute-binding protein  25.05 
 
 
556 aa  125  2e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1169  oligopeptide-binding protein of oligopeptide ABC transporter  25.51 
 
 
587 aa  125  2e-27  Synechococcus elongatus PCC 7942  Bacteria  normal  0.317639  normal 
 
 
-
 
NC_011901  Tgr7_0947  extracellular solute-binding protein family 5  24.17 
 
 
622 aa  125  2e-27  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_16530  ABC-type dipeptide transport system, periplasmic component  26.29 
 
 
510 aa  125  2e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.564688 
 
 
-
 
NC_011769  DvMF_0788  extracellular solute-binding protein family 5  24.81 
 
 
576 aa  125  2e-27  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.301156 
 
 
-
 
NC_013946  Mrub_1660  extracellular solute-binding protein family 5  26.15 
 
 
589 aa  125  2e-27  Meiothermus ruber DSM 1279  Bacteria  normal  0.299882  normal  0.183706 
 
 
-
 
NC_011371  Rleg2_6559  extracellular solute-binding protein family 5  27.71 
 
 
536 aa  125  3e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.67626  normal  0.403463 
 
 
-
 
NC_003295  RSc2006  transport binding transmembrane protein  26.91 
 
 
528 aa  124  4e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0304834 
 
 
-
 
NC_010002  Daci_5671  extracellular solute-binding protein  26.46 
 
 
531 aa  124  4e-27  Delftia acidovorans SPH-1  Bacteria  normal  0.880059  normal  0.0905991 
 
 
-
 
NC_011989  Avi_3874  ABC transporter substrate binding protein (oligopeptide)  27.54 
 
 
585 aa  124  4e-27  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0195  extracellular solute-binding protein  25.05 
 
 
526 aa  124  5e-27  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
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