More than 300 homologs were found in PanDaTox collection
for query gene Sros_3842 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_3842  extracellular solute-binding protein family 1  100 
 
 
429 aa  880    Streptosporangium roseum DSM 43021  Bacteria  normal  0.0316121  normal  0.0422385 
 
 
-
 
NC_013131  Caci_4993  extracellular solute-binding protein family 1  52.29 
 
 
432 aa  439  9.999999999999999e-123  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0450999  normal  0.012477 
 
 
-
 
NC_013093  Amir_2832  extracellular solute-binding protein family 1  53.47 
 
 
417 aa  430  1e-119  Actinosynnema mirum DSM 43827  Bacteria  normal  0.617934  n/a   
 
 
-
 
NC_009620  Smed_4159  extracellular solute-binding protein  37.28 
 
 
421 aa  258  2e-67  Sinorhizobium medicae WSM419  Bacteria  normal  0.119299  normal  0.873951 
 
 
-
 
NC_012850  Rleg_3910  extracellular solute-binding protein family 1  35.15 
 
 
412 aa  246  4.9999999999999997e-64  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.198843 
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  33.67 
 
 
415 aa  243  3.9999999999999997e-63  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_011369  Rleg2_3622  extracellular solute-binding protein family 1  34.16 
 
 
412 aa  238  1e-61  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2146  extracellular solute-binding protein  31.78 
 
 
414 aa  234  2.0000000000000002e-60  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4147  extracellular solute-binding protein family 1  31.06 
 
 
441 aa  162  8.000000000000001e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.892231  normal 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  29.43 
 
 
423 aa  139  7.999999999999999e-32  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  25.21 
 
 
430 aa  111  2.0000000000000002e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  27.06 
 
 
407 aa  92  2e-17  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  25 
 
 
415 aa  90.9  4e-17  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  24.69 
 
 
414 aa  89.4  1e-16  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  25.93 
 
 
426 aa  85.9  0.000000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  25.43 
 
 
456 aa  85.1  0.000000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  24.47 
 
 
424 aa  84  0.000000000000005  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  26.69 
 
 
410 aa  83.2  0.000000000000007  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  26.69 
 
 
410 aa  83.2  0.000000000000007  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  26.99 
 
 
464 aa  83.2  0.000000000000009  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  23.7 
 
 
454 aa  81.3  0.00000000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_06270  ABC-type sugar transport system, periplasmic component  24.79 
 
 
426 aa  80.5  0.00000000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  25.35 
 
 
410 aa  80.1  0.00000000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_013595  Sros_9091  ABC-type sugar transport system periplasmic component-like protein  26.15 
 
 
422 aa  80.5  0.00000000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.306335  normal 
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  23.64 
 
 
445 aa  80.1  0.00000000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_013947  Snas_3121  extracellular solute-binding protein family 1  25 
 
 
445 aa  79.7  0.00000000000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00116931 
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  24.04 
 
 
426 aa  79.7  0.0000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  24.02 
 
 
447 aa  79.7  0.0000000000001  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  23.02 
 
 
411 aa  79  0.0000000000002  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  25.07 
 
 
424 aa  78.6  0.0000000000002  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  24.04 
 
 
435 aa  78.2  0.0000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_009636  Smed_2315  extracellular solute-binding protein  24.45 
 
 
455 aa  79  0.0000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.271919 
 
 
-
 
NC_013526  Tter_2703  extracellular solute-binding protein family 1  24.7 
 
 
450 aa  78.6  0.0000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000263225  n/a   
 
 
-
 
NC_013521  Sked_21150  carbohydrate-binding protein  23.67 
 
 
428 aa  78.2  0.0000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.396929  normal  0.174783 
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  27.68 
 
 
421 aa  77.8  0.0000000000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  24.79 
 
 
410 aa  78.2  0.0000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_009620  Smed_4557  extracellular solute-binding protein  24.4 
 
 
412 aa  78.2  0.0000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.302395  normal 
 
 
-
 
NC_012669  Bcav_3982  extracellular solute-binding protein family 1  24.85 
 
 
435 aa  77.4  0.0000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.71759  normal 
 
 
-
 
NC_010320  Teth514_0397  extracellular solute-binding protein  24.45 
 
 
428 aa  77.4  0.0000000000004  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  26.83 
 
 
420 aa  77  0.0000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  24.93 
 
 
410 aa  76.6  0.0000000000008  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_013093  Amir_4241  extracellular solute-binding protein family 1  24.93 
 
 
422 aa  76.6  0.0000000000008  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  26.42 
 
 
411 aa  76.3  0.000000000001  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  23.44 
 
 
366 aa  75.1  0.000000000002  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  23.17 
 
 
429 aa  75.5  0.000000000002  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  24.01 
 
 
427 aa  74.3  0.000000000003  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011366  Rleg2_5687  extracellular solute-binding protein family 1  27.49 
 
 
401 aa  73.9  0.000000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.627079  normal 
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  23.12 
 
 
431 aa  73.9  0.000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_013526  Tter_2524  extracellular solute-binding protein family 1  24.93 
 
 
483 aa  73.6  0.000000000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000000331289  n/a   
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  24.23 
 
 
445 aa  73.6  0.000000000007  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6631  extracellular solute-binding protein family 1  27.67 
 
 
410 aa  73.6  0.000000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.325237 
 
 
-
 
NC_011368  Rleg2_5349  extracellular solute-binding protein family 1  25.98 
 
 
406 aa  73.2  0.000000000009  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.535832 
 
 
-
 
NC_009972  Haur_1150  extracellular solute-binding protein  28.99 
 
 
441 aa  73.2  0.000000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.344094  n/a   
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  22.93 
 
 
411 aa  73.2  0.00000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  21.89 
 
 
399 aa  72.4  0.00000000001  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_013525  Tter_1095  extracellular solute-binding protein family 1  30 
 
 
530 aa  72.4  0.00000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011988  Avi_6240  ABC transporter substrate binding protein (maltose)  29.86 
 
 
407 aa  72  0.00000000002  Agrobacterium vitis S4  Bacteria  normal  0.0994607  n/a   
 
 
-
 
NC_009664  Krad_2164  extracellular solute-binding protein family 1  25.21 
 
 
435 aa  71.6  0.00000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6584  ABC transporter sugar binding protein  24.52 
 
 
437 aa  71.6  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2758  extracellular solute-binding protein family 1  24.5 
 
 
423 aa  72.4  0.00000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.736779  normal 
 
 
-
 
NC_010003  Pmob_1492  extracellular solute-binding protein  24.46 
 
 
421 aa  72  0.00000000002  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  25.07 
 
 
457 aa  72  0.00000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2733  extracellular solute-binding protein family 1  24.73 
 
 
434 aa  71.2  0.00000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0602915  normal  0.13145 
 
 
-
 
NC_007777  Francci3_2834  extracellular solute-binding protein  26.94 
 
 
459 aa  71.6  0.00000000003  Frankia sp. CcI3  Bacteria  normal  0.873121  normal 
 
 
-
 
NC_012669  Bcav_4059  extracellular solute-binding protein family 1  26.02 
 
 
440 aa  71.2  0.00000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2297  extracellular solute-binding protein  25.42 
 
 
416 aa  71.6  0.00000000003  Serratia proteamaculans 568  Bacteria  normal  0.33558  normal 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  22.92 
 
 
414 aa  70.9  0.00000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  23.08 
 
 
461 aa  70.9  0.00000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_008541  Arth_3895  extracellular solute-binding protein  26.52 
 
 
433 aa  71.2  0.00000000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2013  extracellular solute-binding protein family 1  25.29 
 
 
423 aa  70.9  0.00000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.991542  normal  0.0817819 
 
 
-
 
NC_010816  BLD_0923  MalE-type ABC sugar transport system periplasmic component  25.43 
 
 
450 aa  70.9  0.00000000004  Bifidobacterium longum DJO10A  Bacteria  normal  0.293658  n/a   
 
 
-
 
NC_013172  Bfae_28390  ABC-type sugar transport system, periplasmic component  26.39 
 
 
453 aa  70.5  0.00000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4320  extracellular solute-binding protein family 1  23.85 
 
 
425 aa  70.5  0.00000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.811375  hitchhiker  0.00841489 
 
 
-
 
NC_011661  Dtur_0508  extracellular solute-binding protein family 1  25.66 
 
 
421 aa  70.5  0.00000000006  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.0000506303  n/a   
 
 
-
 
NC_007413  Ava_3685  extracellular solute-binding protein  23.08 
 
 
432 aa  70.1  0.00000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0482  extracellular solute-binding protein  25.4 
 
 
443 aa  70.1  0.00000000007  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00268905  n/a   
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  22.74 
 
 
427 aa  70.1  0.00000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_004311  BRA0304  sugar ABC transporter, periplasmic sugar-binding protein  25.53 
 
 
421 aa  69.3  0.0000000001  Brucella suis 1330  Bacteria  normal  0.367443  n/a   
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  25.07 
 
 
416 aa  68.9  0.0000000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011366  Rleg2_5852  extracellular solute-binding protein family 1  22.7 
 
 
419 aa  69.7  0.0000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_3812  extracellular solute-binding protein  28.47 
 
 
423 aa  68.9  0.0000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.353807  normal 
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  25.32 
 
 
419 aa  68.9  0.0000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_012669  Bcav_2274  extracellular solute-binding protein family 1  24.93 
 
 
428 aa  69.3  0.0000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.837023  normal 
 
 
-
 
NC_013131  Caci_4697  extracellular solute-binding protein family 1  22.62 
 
 
442 aa  68.9  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00367387  normal 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  23.77 
 
 
466 aa  68.9  0.0000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_00380  extracellular solute-binding protein family 1  24.04 
 
 
422 aa  68.9  0.0000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  25.28 
 
 
406 aa  68.9  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_011886  Achl_2094  extracellular solute-binding protein family 1  25.58 
 
 
441 aa  68.6  0.0000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000152964 
 
 
-
 
NC_012669  Bcav_1296  extracellular solute-binding protein family 1  22.76 
 
 
443 aa  68.9  0.0000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_010001  Cphy_0494  extracellular solute-binding protein  29.3 
 
 
465 aa  68.6  0.0000000002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6765  extracellular solute-binding protein family 1  22.77 
 
 
419 aa  68.2  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.979933  normal 
 
 
-
 
NC_012850  Rleg_3393  extracellular solute-binding protein family 1  23.82 
 
 
412 aa  67.8  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.205631 
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  24.78 
 
 
416 aa  67.4  0.0000000004  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  23.23 
 
 
444 aa  67.8  0.0000000004  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_011661  Dtur_0378  extracellular solute-binding protein family 1  25.27 
 
 
420 aa  67.8  0.0000000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1020  extracellular solute-binding protein  23.59 
 
 
459 aa  67.4  0.0000000004  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000000124434  n/a   
 
 
-
 
NC_010571  Oter_4148  extracellular solute-binding protein  23.25 
 
 
426 aa  67.8  0.0000000004  Opitutus terrae PB90-1  Bacteria  normal  0.0472509  normal  0.106363 
 
 
-
 
NC_008025  Dgeo_0751  extracellular solute-binding protein  26.23 
 
 
411 aa  67.4  0.0000000005  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0314212  normal 
 
 
-
 
NC_012848  Rleg_4863  extracellular solute-binding protein family 1  27.31 
 
 
492 aa  67.4  0.0000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.426159 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  24.23 
 
 
439 aa  67.4  0.0000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
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