36 homologs were found in PanDaTox collection
for query gene Spro_3931 on replicon NC_009832
Organism: Serratia proteamaculans 568



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013421  Pecwa_3887  hypothetical protein  88.59 
 
 		 366 aa  651    Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_3690  hypothetical protein  88.32 
 
 		 366 aa  648    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_3931  hypothetical protein  100 
 
 		 366 aa  748    Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008309  HS_0765  ABC-type sugar-binding periplasmic protein  65.01 
 
 		 369 aa  499  1e-140  Haemophilus somnus 129PT  Bacteria  normal  0.234513  n/a   
 
 
-
 
NC_008786  Veis_2711  putative sugar ABC transporter, substrate-binding protein  51.94 
 
 		 369 aa  384  1e-105  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.210601 
 
 
-
 
NC_012791  Vapar_3345  putative sugar ABC transporter, substrate-binding protein  52.34 
 
 		 373 aa  377  1e-103  Variovorax paradoxus S110  Bacteria  normal  0.643163  n/a   
 
 
-
 
NC_011988  Avi_5039  ABC-type sugar transport system, periplasmic component  51.09 
 
 		 364 aa  358  9.999999999999999e-98  Agrobacterium vitis S4  Bacteria  normal  0.797463  n/a   
 
 
-
 
NC_011368  Rleg2_4516  putative sugar ABC transporter, substrate-binding protein  49.73 
 
 		 365 aa  354  1e-96  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.112183  normal  1 
 
 
-
 
NC_012854  Rleg_6409  putative sugar ABC transporter, substrate-binding protein  50 
 
 		 365 aa  351  8.999999999999999e-96  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.000000237151  normal  0.403501 
 
 
-
 
NC_009484  Acry_1595  ABC-type sugar transport system periplasmic component-like protein  45.75 
 
 		 368 aa  301  1e-80  Acidiphilium cryptum JF-5  Bacteria  normal  0.32236  n/a   
 
 
-
 
NC_010623  Bphy_5185  putative signal peptide protein  43.07 
 
 		 377 aa  289  5.0000000000000004e-77  Burkholderia phymatum STM815  Bacteria  normal  0.296404  normal  0.0737238 
 
 
-
 
NC_003296  RS02363  signal peptide protein  41.39 
 
 		 366 aa  280  3e-74  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.0272231 
 
 
-
 
NC_008709  Ping_1312  ABC transporter substrate-binding protein or LacI-type transcriptional regulator  43.03 
 
 		 357 aa  268  1e-70  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_3830  hypothetical protein  38.41 
 
 		 344 aa  211  2e-53  Pseudomonas mendocina ymp  Bacteria  normal  0.985949  normal  1 
 
 
-
 
NC_008699  Noca_0679  ABC-type sugar transport system periplasmic component-like  24.17 
 
 		 387 aa  76.6  0.0000000000006  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_0806  ABC-type sugar transport system periplasmic component-like  24.34 
 
 		 398 aa  70.5  0.00000000004  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_1810  ABC-type sugar transport system periplasmic component-like protein  22.98 
 
 		 388 aa  67  0.0000000005  Arthrobacter sp. FB24  Bacteria  normal  0.0233725  n/a   
 
 
-
 
NC_013739  Cwoe_2342  ABC-type sugar transport system periplasmic component-like protein  23.48 
 
 		 378 aa  63.5  0.000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.759463  normal  0.08592 
 
 
-
 
NC_013739  Cwoe_2362  ABC-type sugar transport system periplasmic component-like protein  22.68 
 
 		 380 aa  60.8  0.00000003  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.0310858 
 
 
-
 
NC_013730  Slin_1047  periplasmic binding protein/LacI transcriptional regulator  25.73 
 
 		 317 aa  57.8  0.0000003  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_50140  Periplasmic substrate-binding protein of sugar ABC transporter  25.47 
 
 		 310 aa  56.6  0.0000007  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_0604  ABC-type sugar transport system periplasmic component-like  24.33 
 
 		 391 aa  55.8  0.000001  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_011881  Achl_4609  periplasmic binding protein/LacI transcriptional regulator  25.87 
 
 		 319 aa  55.1  0.000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013739  Cwoe_4004  ABC-type sugar transport system periplasmic component-like protein  23.3 
 
 		 399 aa  54.7  0.000003  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_3164  Monosaccharide-transporting ATPase  24.82 
 
 		 310 aa  53.9  0.000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_0099  ABC-type sugar transport system periplasmic component-like  22.98 
 
 		 400 aa  53.5  0.000006  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_3490  sugar ABC transporter, periplasmic sugar-binding protein  24.36 
 
 		 309 aa  50.4  0.00005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.70516  n/a   
 
 
-
 
NC_008699  Noca_0588  ABC-type sugar transport system periplasmic component-like  22.49 
 
 		 390 aa  50.4  0.00005  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_50130  Periplasmic substrate-binding protein of sugar ABC transporter  25.37 
 
 		 308 aa  47.4  0.0004  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_50320  ABC transporter substrate binding protein  24.62 
 
 		 315 aa  45.8  0.001  Azotobacter vinelandii DJ  Bacteria  normal  0.193489  n/a   
 
 
-
 
NC_007802  Jann_2406  periplasmic binding protein/LacI transcriptional regulator  23.91 
 
 		 303 aa  45.8  0.001  Jannaschia sp. CCS1  Bacteria  normal  0.362363  normal  0.524454 
 
 
-
 
NC_008786  Veis_2026  periplasmic binding protein/LacI transcriptional regulator  27.71 
 
 		 320 aa  44.7  0.003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_3958  periplasmic binding protein/LacI transcriptional regulator  25 
 
 		 436 aa  43.9  0.004  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000000179604  hitchhiker  0.00000000917586 
 
 
-
 
NC_003295  RSc1241  putative rhizopine-binding precursor signal peptide protein  24.11 
 
 		 309 aa  43.9  0.005  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_2806  transcriptional regulator, periplasmic binding protein of LacI family protein  25.39 
 
 		 313 aa  43.9  0.005  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_3265  periplasmic binding protein/LacI transcriptional regulator  24.35 
 
 		 311 aa  42.7  0.009  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0610984  normal  1 
 
 
-
 
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