More than 300 homologs were found in PanDaTox collection
for query gene Spro_3183 on replicon NC_009832
Organism: Serratia proteamaculans 568



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  100 
 
 
260 aa  521  1e-147  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  83.08 
 
 
260 aa  438  9.999999999999999e-123  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  77.43 
 
 
262 aa  411  1e-114  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  77.65 
 
 
262 aa  407  1.0000000000000001e-112  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  75.29 
 
 
260 aa  397  1e-109  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  74.9 
 
 
261 aa  394  1e-108  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  71.6 
 
 
264 aa  388  1e-107  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  71.98 
 
 
264 aa  389  1e-107  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  73.93 
 
 
262 aa  386  1e-106  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  71.71 
 
 
262 aa  385  1e-106  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  71.81 
 
 
262 aa  382  1e-105  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  72.59 
 
 
262 aa  363  1e-99  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  62.16 
 
 
287 aa  327  1.0000000000000001e-88  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  56.52 
 
 
265 aa  267  1e-70  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  55.38 
 
 
264 aa  265  4e-70  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  55.73 
 
 
265 aa  265  4e-70  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  54.65 
 
 
269 aa  256  3e-67  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  51.55 
 
 
271 aa  256  4e-67  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  49.42 
 
 
266 aa  254  1.0000000000000001e-66  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  49.81 
 
 
266 aa  252  5.000000000000001e-66  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  49.42 
 
 
281 aa  249  4e-65  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  49.42 
 
 
281 aa  249  4e-65  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  50.19 
 
 
270 aa  248  5e-65  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  49.42 
 
 
266 aa  248  6e-65  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  49.42 
 
 
266 aa  248  7e-65  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  50 
 
 
257 aa  248  7e-65  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  48.64 
 
 
266 aa  247  2e-64  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  48.64 
 
 
266 aa  244  9.999999999999999e-64  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  49.03 
 
 
267 aa  243  1.9999999999999999e-63  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  49.61 
 
 
265 aa  243  3e-63  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  49.81 
 
 
270 aa  242  6e-63  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  51.76 
 
 
266 aa  240  1e-62  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  52.12 
 
 
264 aa  239  4e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  50.39 
 
 
266 aa  239  5e-62  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  47.69 
 
 
264 aa  235  5.0000000000000005e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  49.62 
 
 
262 aa  233  2.0000000000000002e-60  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  47.13 
 
 
269 aa  231  1e-59  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  48.24 
 
 
265 aa  229  3e-59  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  49.04 
 
 
263 aa  229  3e-59  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  45 
 
 
271 aa  229  3e-59  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  48.85 
 
 
262 aa  228  9e-59  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  45.74 
 
 
265 aa  226  3e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  46.67 
 
 
270 aa  222  6e-57  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  44.57 
 
 
265 aa  221  9.999999999999999e-57  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  47.69 
 
 
271 aa  220  1.9999999999999999e-56  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  44.75 
 
 
269 aa  218  6e-56  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  46.33 
 
 
285 aa  218  7.999999999999999e-56  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  47.08 
 
 
270 aa  213  3.9999999999999995e-54  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  43.98 
 
 
266 aa  212  5.999999999999999e-54  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  45.08 
 
 
266 aa  212  5.999999999999999e-54  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  43.41 
 
 
269 aa  211  9e-54  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  44.31 
 
 
264 aa  211  1e-53  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  42.25 
 
 
266 aa  207  1e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  48.83 
 
 
269 aa  206  2e-52  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  42.42 
 
 
266 aa  202  4e-51  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  40.16 
 
 
269 aa  174  9.999999999999999e-43  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  37.4 
 
 
267 aa  172  5e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  49.41 
 
 
264 aa  171  9e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  43.59 
 
 
199 aa  169  5e-41  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  41.13 
 
 
259 aa  160  3e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  37.16 
 
 
263 aa  159  4e-38  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  42.42 
 
 
258 aa  156  2e-37  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  42.42 
 
 
258 aa  156  2e-37  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  42.42 
 
 
258 aa  155  7e-37  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  37.73 
 
 
283 aa  152  5e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  37.74 
 
 
268 aa  151  8e-36  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  38.59 
 
 
266 aa  148  8e-35  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  43.72 
 
 
255 aa  148  9e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  39 
 
 
266 aa  148  1.0000000000000001e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  39.38 
 
 
252 aa  146  3e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  37.83 
 
 
296 aa  146  3e-34  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  39.83 
 
 
258 aa  145  5e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  34.82 
 
 
255 aa  142  5e-33  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  36.11 
 
 
269 aa  142  6e-33  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  39.22 
 
 
249 aa  142  6e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  39.04 
 
 
269 aa  142  7e-33  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  38.16 
 
 
253 aa  142  8e-33  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  41 
 
 
263 aa  141  9e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  40.54 
 
 
253 aa  141  9.999999999999999e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  40.36 
 
 
267 aa  140  1.9999999999999998e-32  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  39.83 
 
 
258 aa  139  4.999999999999999e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  36.84 
 
 
250 aa  138  7.999999999999999e-32  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  40.39 
 
 
264 aa  138  8.999999999999999e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  35.96 
 
 
262 aa  138  1e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  37.39 
 
 
269 aa  137  2e-31  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2686  short-chain dehydrogenase/reductase SDR  39.56 
 
 
258 aa  135  5e-31  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00673203  n/a   
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  37.07 
 
 
258 aa  135  9e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  37.72 
 
 
269 aa  135  9e-31  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2814  short-chain dehydrogenase/reductase SDR  41.27 
 
 
260 aa  134  9.999999999999999e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.563613  normal 
 
 
-
 
NC_007512  Plut_1969  short chain dehydrogenase/reductase family oxidoreductase  36.09 
 
 
260 aa  134  9.999999999999999e-31  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  40.79 
 
 
254 aa  134  1.9999999999999998e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  36.44 
 
 
258 aa  133  3e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  40.72 
 
 
261 aa  133  3e-30  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  38.26 
 
 
259 aa  132  3.9999999999999996e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  35.78 
 
 
321 aa  132  3.9999999999999996e-30  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  35.78 
 
 
262 aa  132  5e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  40.21 
 
 
261 aa  132  7.999999999999999e-30  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  35.34 
 
 
263 aa  131  1.0000000000000001e-29  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  41.85 
 
 
258 aa  130  1.0000000000000001e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  38.6 
 
 
250 aa  129  3e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>