55 homologs were found in PanDaTox collection
for query gene Spro_2468 on replicon NC_009832
Organism: Serratia proteamaculans 568



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009832  Spro_2468  formaldehyde-activating protein  100 
 
 
167 aa  347  5e-95  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1651  formaldehyde-activating enzyme  77.25 
 
 
167 aa  257  6e-68  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1542  hypothetical protein  77.25 
 
 
167 aa  257  6e-68  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1721  hypothetical protein  76.65 
 
 
167 aa  253  1.0000000000000001e-66  Yersinia pestis Angola  Bacteria  normal  0.054067  hitchhiker  0.00446803 
 
 
-
 
NC_007511  Bcep18194_B2825  hypothetical protein  64.24 
 
 
174 aa  234  5.0000000000000005e-61  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6933  formaldehyde-activating enzyme  62.42 
 
 
190 aa  233  8e-61  Burkholderia phytofirmans PsJN  Bacteria  normal  0.587797  normal 
 
 
-
 
NC_007955  Mbur_1994  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  36.55 
 
 
396 aa  119  3e-26  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2060  formaldehyde-activating enzyme  39.46 
 
 
178 aa  115  1.9999999999999998e-25  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.189028  normal  0.41416 
 
 
-
 
NC_009712  Mboo_0772  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  34 
 
 
393 aa  108  3e-23  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.58783 
 
 
-
 
NC_007955  Mbur_0367  formaldehyde-activating enzyme  35.44 
 
 
160 aa  105  4e-22  Methanococcoides burtonii DSM 6242  Archaea  normal  0.203725  n/a   
 
 
-
 
NC_009051  Memar_1085  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  38 
 
 
393 aa  105  4e-22  Methanoculleus marisnigri JR1  Archaea  normal  0.136979  n/a   
 
 
-
 
NC_014148  Plim_1285  formaldehyde-activating enzyme  32.72 
 
 
165 aa  104  6e-22  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0996  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  32.21 
 
 
403 aa  103  1e-21  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.566431 
 
 
-
 
NC_011832  Mpal_1036  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  33.79 
 
 
393 aa  98.6  3e-20  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_012791  Vapar_3079  formaldehyde-activating enzyme  31.06 
 
 
170 aa  95.9  2e-19  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0935  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  35.66 
 
 
392 aa  93.6  1e-18  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.0033619  normal 
 
 
-
 
NC_007952  Bxe_B2436  formaldehyde-activating protein  29.81 
 
 
169 aa  93.2  1e-18  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.397979 
 
 
-
 
NC_008553  Mthe_0988  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  35.66 
 
 
392 aa  92  3e-18  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_011894  Mnod_6007  formaldehyde-activating enzyme  31.06 
 
 
171 aa  92  4e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.100814  n/a   
 
 
-
 
NC_010511  M446_5783  formaldehyde-activating enzyme  29.81 
 
 
171 aa  89.7  1e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.0971644  normal 
 
 
-
 
NC_008825  Mpe_A2612  formaldehyde-activating enzyme  28.57 
 
 
169 aa  89.4  2e-17  Methylibium petroleiphilum PM1  Bacteria  normal  0.0416881  normal 
 
 
-
 
NC_007796  Mhun_1628  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  34.52 
 
 
393 aa  89.4  2e-17  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0533  formaldehyde-activating enzyme  29.81 
 
 
170 aa  89  3e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3147  formaldehyde-activating enzyme  30.06 
 
 
169 aa  88.2  4e-17  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007947  Mfla_2524  putative formaldehyde-activating enzyme  35.33 
 
 
183 aa  88.2  5e-17  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_0975  formaldehyde-activating enzyme  33.54 
 
 
167 aa  87.4  7e-17  Methanoculleus marisnigri JR1  Archaea  normal  0.0927434  n/a   
 
 
-
 
NC_010725  Mpop_1785  formaldehyde-activating enzyme  28.57 
 
 
170 aa  87  1e-16  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2169  formaldehyde-activating enzyme  28.57 
 
 
170 aa  86.3  2e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.783809  normal  0.178175 
 
 
-
 
NC_010172  Mext_1834  formaldehyde-activating enzyme  28.57 
 
 
170 aa  86.3  2e-16  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0032  formaldehyde-activating protein  29.19 
 
 
169 aa  85.9  3e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.848098 
 
 
-
 
NC_010625  Bphy_6487  formaldehyde-activating enzyme  28.75 
 
 
169 aa  85.5  3e-16  Burkholderia phymatum STM815  Bacteria  normal  0.497311  normal  0.302319 
 
 
-
 
NC_012791  Vapar_3063  formaldehyde-activating enzyme  35.29 
 
 
177 aa  84  9e-16  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2016  formaldehyde-activating enzyme  35.04 
 
 
179 aa  84  9e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.560353  normal  0.585828 
 
 
-
 
NC_009720  Xaut_1365  formaldehyde-activating protein  33.12 
 
 
191 aa  83.2  0.000000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.745489  normal 
 
 
-
 
NC_010623  Bphy_5474  formaldehyde-activating enzyme  36.03 
 
 
177 aa  82.8  0.000000000000002  Burkholderia phymatum STM815  Bacteria  normal  0.0338658  normal  0.0655052 
 
 
-
 
NC_007947  Mfla_1652  formaldehyde-activating enzyme  29.49 
 
 
178 aa  83.2  0.000000000000002  Methylobacillus flagellatus KT  Bacteria  unclonable  0.000000000163018  normal  0.176505 
 
 
-
 
NC_011666  Msil_2390  formaldehyde-activating enzyme  26.71 
 
 
175 aa  82  0.000000000000003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008825  Mpe_A2627  putative formaldehyde-activating enzyme  35.29 
 
 
177 aa  82.4  0.000000000000003  Methylibium petroleiphilum PM1  Bacteria  normal  0.212894  normal 
 
 
-
 
NC_007947  Mfla_2364  putative formaldehyde-activating enzyme  27.98 
 
 
182 aa  81.6  0.000000000000004  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000000204771  normal  0.719365 
 
 
-
 
NC_011757  Mchl_1725  formaldehyde-activating enzyme  33.58 
 
 
179 aa  79.3  0.00000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.393787  normal  0.0143668 
 
 
-
 
NC_010172  Mext_1450  formaldehyde-activating enzyme  33.58 
 
 
179 aa  79.3  0.00000000000002  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.485811 
 
 
-
 
NC_007947  Mfla_2543  formaldehyde-activating enzyme  30.77 
 
 
178 aa  79.3  0.00000000000002  Methylobacillus flagellatus KT  Bacteria  normal  0.234356  normal 
 
 
-
 
NC_010524  Lcho_3132  formaldehyde-activating enzyme  33.82 
 
 
181 aa  78.6  0.00000000000004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010511  M446_4369  formaldehyde-activating enzyme  33.58 
 
 
181 aa  78.2  0.00000000000004  Methylobacterium sp. 4-46  Bacteria  normal  0.279882  normal 
 
 
-
 
NC_011894  Mnod_4915  formaldehyde-activating enzyme  33.58 
 
 
181 aa  77.8  0.00000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.090523  n/a   
 
 
-
 
NC_010725  Mpop_1445  formaldehyde-activating enzyme  32.85 
 
 
179 aa  77.4  0.00000000000008  Methylobacterium populi BJ001  Bacteria  normal  normal  0.318243 
 
 
-
 
NC_002977  MCA2866  formaldehyde-activating enzyme  26.71 
 
 
170 aa  77  0.0000000000001  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1627  formaldehyde-activating protein  31.97 
 
 
179 aa  72.8  0.000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.67854  normal 
 
 
-
 
NC_011666  Msil_1799  formaldehyde-activating enzyme  32.35 
 
 
178 aa  72  0.000000000003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_014148  Plim_3519  formaldehyde-activating enzyme  26.97 
 
 
211 aa  68.2  0.00000000006  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3340  Formaldehyde-activating enzyme (Fae)  24.68 
 
 
182 aa  62.4  0.000000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3465  Formaldehyde-activating enzyme (Fae)  24.03 
 
 
182 aa  60.8  0.000000008  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.719607  normal 
 
 
-
 
NC_010172  Mext_3143  formaldehyde-activating protein  24.03 
 
 
182 aa  60.8  0.000000008  Methylobacterium extorquens PA1  Bacteria  normal  0.389753  normal  0.873661 
 
 
-
 
NC_010505  Mrad2831_4467  formaldehyde-activating protein  24.03 
 
 
182 aa  60.1  0.00000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.164696 
 
 
-
 
NC_011894  Mnod_3403  Formaldehyde-activating enzyme (Fae)  24.03 
 
 
182 aa  58.5  0.00000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
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