13 homologs were found in PanDaTox collection
for query gene Spea_3852 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009901  Spea_3852  hypothetical protein  100 
 
 
989 aa  1979  Shewanella pealeana ATCC 700345  Bacteria  unclonable  2.34883e-05  n/a   
 
 
-
 
NC_008577  Shewana3_1612  hypothetical protein  26.52 
 
 
622 aa  73.2  2e-11  Shewanella sp. ANA-3  Bacteria  normal  0.0939713  normal  0.0780144 
 
 
-
 
NC_008321  Shewmr4_3141  protease domain-containing protein  26.53 
 
 
1393 aa  57.4  1e-06  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2073  EF hand domain/PKD domain-containing protein  28.19 
 
 
1779 aa  56.6  2e-06  Geobacter sulfurreducens PCA  Bacteria  normal  0.167028  n/a   
 
 
-
 
NC_008577  Shewana3_0797  protease domain-containing protein  26.02 
 
 
1393 aa  56.2  3e-06  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3053  Ig family protein  26.24 
 
 
3244 aa  53.1  2e-05  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1670  PKD domain containing protein  26.69 
 
 
635 aa  52  6e-05  Anaeromyxobacter sp. K  Bacteria  unclonable  0.00387943  n/a   
 
 
-
 
NC_013440  Hoch_0178  hypothetical protein  25.54 
 
 
786 aa  51.6  7e-05  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1197  PKD domain containing protein  26.57 
 
 
2079 aa  51.6  8e-05  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007954  Sden_0152  PKD  25 
 
 
506 aa  50.1  0.0002  Shewanella denitrificans OS217  Bacteria  hitchhiker  5.35415e-05  n/a   
 
 
-
 
NC_011891  A2cp1_1743  PKD domain containing protein  26.69 
 
 
635 aa  48.9  0.0005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.619925  n/a   
 
 
-
 
NC_013440  Hoch_6710  NHL repeat containing protein  38.71 
 
 
692 aa  46.6  0.002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4979  Carbohydrate-binding family 9  21.64 
 
 
1418 aa  45.8  0.005  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.502529  normal 
 
 
-
 
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