More than 300 homologs were found in PanDaTox collection
for query gene Snas_6386 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  100 
 
 
382 aa  780    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  47.15 
 
 
414 aa  289  5.0000000000000004e-77  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  46.02 
 
 
420 aa  285  8e-76  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  37.12 
 
 
390 aa  193  4e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  36.54 
 
 
349 aa  189  8e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  33.33 
 
 
362 aa  186  4e-46  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  34.2 
 
 
497 aa  171  1e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  35.06 
 
 
509 aa  170  5e-41  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  34.27 
 
 
377 aa  159  9e-38  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  34.01 
 
 
480 aa  157  3e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_009953  Sare_4011  cell envelope-related transcriptional attenuator  31.64 
 
 
380 aa  156  5.0000000000000005e-37  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000201414 
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  33.33 
 
 
358 aa  156  7e-37  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  34.7 
 
 
336 aa  152  8.999999999999999e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  34.38 
 
 
381 aa  152  1e-35  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  33.74 
 
 
326 aa  150  5e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  33.44 
 
 
504 aa  149  6e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  30.68 
 
 
512 aa  149  6e-35  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  32.93 
 
 
486 aa  148  2.0000000000000003e-34  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  34.27 
 
 
320 aa  147  4.0000000000000006e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  33.43 
 
 
478 aa  146  5e-34  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  34.24 
 
 
584 aa  146  6e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  30.56 
 
 
530 aa  145  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_009380  Strop_3629  transcription attenuator LytR  30.23 
 
 
378 aa  143  5e-33  Salinispora tropica CNB-440  Bacteria  normal  0.142384  normal 
 
 
-
 
NC_009953  Sare_5021  cell envelope-related transcriptional attenuator  30.23 
 
 
312 aa  141  1.9999999999999998e-32  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00237783 
 
 
-
 
NC_011886  Achl_3034  cell envelope-related transcriptional attenuator  31.51 
 
 
379 aa  141  1.9999999999999998e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.63975 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  32.11 
 
 
625 aa  141  1.9999999999999998e-32  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  34.63 
 
 
466 aa  140  3e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  29.39 
 
 
453 aa  139  7.999999999999999e-32  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  32.93 
 
 
409 aa  139  8.999999999999999e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  31.6 
 
 
468 aa  138  2e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  33.68 
 
 
395 aa  138  2e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  34.68 
 
 
393 aa  137  3.0000000000000003e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  36.76 
 
 
307 aa  137  3.0000000000000003e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  34.96 
 
 
434 aa  136  5e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  30.49 
 
 
505 aa  137  5e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  30.4 
 
 
481 aa  134  3e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  33.09 
 
 
520 aa  133  5e-30  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  33.44 
 
 
306 aa  133  5e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  35.25 
 
 
303 aa  133  6e-30  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  32.58 
 
 
573 aa  133  6e-30  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  32.79 
 
 
311 aa  133  6e-30  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  32.79 
 
 
311 aa  133  6e-30  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  35.57 
 
 
307 aa  132  7.999999999999999e-30  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  35.27 
 
 
491 aa  132  9e-30  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  32.79 
 
 
311 aa  132  9e-30  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  27.94 
 
 
410 aa  131  2.0000000000000002e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  31.51 
 
 
465 aa  130  3e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  32.04 
 
 
516 aa  130  4.0000000000000003e-29  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  32.44 
 
 
296 aa  130  6e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  30.13 
 
 
313 aa  128  1.0000000000000001e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  26.69 
 
 
521 aa  129  1.0000000000000001e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  30.45 
 
 
434 aa  128  2.0000000000000002e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  30.07 
 
 
374 aa  128  2.0000000000000002e-28  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  32.93 
 
 
394 aa  127  3e-28  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  32.71 
 
 
407 aa  127  3e-28  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  32.17 
 
 
468 aa  126  5e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  32.33 
 
 
551 aa  126  8.000000000000001e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  33.59 
 
 
407 aa  125  1e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013947  Snas_6384  cell envelope-related transcriptional attenuator  27.9 
 
 
352 aa  124  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  28.57 
 
 
618 aa  124  3e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  30.56 
 
 
506 aa  124  4e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  32.2 
 
 
395 aa  123  5e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  29.43 
 
 
400 aa  123  5e-27  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  35.37 
 
 
404 aa  122  8e-27  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  34.84 
 
 
481 aa  122  9e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  34.68 
 
 
560 aa  121  3e-26  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  35.83 
 
 
424 aa  119  9e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  27.99 
 
 
619 aa  119  9.999999999999999e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  28.57 
 
 
676 aa  118  1.9999999999999998e-25  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  32.6 
 
 
356 aa  117  3.9999999999999997e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  29.23 
 
 
489 aa  117  3.9999999999999997e-25  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  27.36 
 
 
522 aa  116  6e-25  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  27 
 
 
496 aa  116  6.9999999999999995e-25  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  27 
 
 
567 aa  116  6.9999999999999995e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  30.3 
 
 
406 aa  116  6.9999999999999995e-25  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  28.21 
 
 
545 aa  116  7.999999999999999e-25  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  29.38 
 
 
442 aa  115  8.999999999999998e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  33.04 
 
 
353 aa  115  1.0000000000000001e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  26.8 
 
 
732 aa  115  1.0000000000000001e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  31.5 
 
 
335 aa  114  2.0000000000000002e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  29.38 
 
 
1336 aa  114  2.0000000000000002e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  30.94 
 
 
389 aa  115  2.0000000000000002e-24  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  27.1 
 
 
549 aa  115  2.0000000000000002e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  33.76 
 
 
363 aa  114  4.0000000000000004e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  30.34 
 
 
643 aa  114  4.0000000000000004e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  32.58 
 
 
377 aa  113  6e-24  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  32.96 
 
 
375 aa  112  7.000000000000001e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  32.96 
 
 
375 aa  113  7.000000000000001e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  32.96 
 
 
375 aa  113  7.000000000000001e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  32.96 
 
 
375 aa  112  7.000000000000001e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  30.48 
 
 
365 aa  112  8.000000000000001e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  30.71 
 
 
383 aa  112  8.000000000000001e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  27.67 
 
 
684 aa  112  9e-24  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  28.12 
 
 
379 aa  112  9e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  27.65 
 
 
493 aa  112  9e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  32.58 
 
 
377 aa  112  1.0000000000000001e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  31.84 
 
 
372 aa  112  1.0000000000000001e-23  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  32.65 
 
 
405 aa  112  1.0000000000000001e-23  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  29.41 
 
 
414 aa  112  1.0000000000000001e-23  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  32.96 
 
 
375 aa  112  1.0000000000000001e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
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