More than 300 homologs were found in PanDaTox collection
for query gene Snas_5595 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  100 
 
 
215 aa  418  1e-116  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  66.36 
 
 
226 aa  276  1e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  64.19 
 
 
218 aa  268  2.9999999999999997e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  62.44 
 
 
219 aa  253  2.0000000000000002e-66  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  63.55 
 
 
220 aa  246  2e-64  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  60.28 
 
 
217 aa  238  5e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  55.09 
 
 
225 aa  227  1e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013510  Tcur_4551  two component transcriptional regulator, LuxR family  62.15 
 
 
220 aa  220  9.999999999999999e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  54.88 
 
 
218 aa  211  7e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  50.7 
 
 
219 aa  197  1.0000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  44.02 
 
 
219 aa  196  3e-49  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  49.77 
 
 
230 aa  196  3e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  51.64 
 
 
218 aa  194  9e-49  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  51.17 
 
 
225 aa  194  1e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  49.77 
 
 
225 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.39 
 
 
239 aa  193  2e-48  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  44.02 
 
 
218 aa  192  3e-48  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.44 
 
 
222 aa  192  3e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  52.34 
 
 
220 aa  191  6e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  47.91 
 
 
225 aa  189  2e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  49.3 
 
 
215 aa  189  2.9999999999999997e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  49.09 
 
 
225 aa  189  4e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  52.53 
 
 
221 aa  187  9e-47  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  49.3 
 
 
228 aa  187  1e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  45.79 
 
 
213 aa  187  1e-46  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  50.47 
 
 
215 aa  186  3e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  44.23 
 
 
211 aa  184  9e-46  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  46.12 
 
 
222 aa  184  1.0000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  47.47 
 
 
218 aa  183  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  46.73 
 
 
224 aa  184  1.0000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  49.07 
 
 
215 aa  183  2.0000000000000003e-45  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  47.71 
 
 
227 aa  182  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  45.54 
 
 
226 aa  183  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  47.66 
 
 
225 aa  182  2.0000000000000003e-45  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  48.15 
 
 
224 aa  183  2.0000000000000003e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  50.23 
 
 
214 aa  182  3e-45  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  48.13 
 
 
224 aa  182  3e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  47.47 
 
 
217 aa  182  3e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  42.52 
 
 
216 aa  181  5.0000000000000004e-45  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  48.85 
 
 
222 aa  181  5.0000000000000004e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  47.62 
 
 
234 aa  181  6e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  50.93 
 
 
221 aa  181  8.000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  44.86 
 
 
215 aa  181  8.000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  47.2 
 
 
239 aa  181  9.000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.377169 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  47.47 
 
 
220 aa  180  1e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014158  Tpau_2414  two component transcriptional regulator, LuxR family  48.6 
 
 
215 aa  179  2e-44  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  48.61 
 
 
222 aa  179  2.9999999999999997e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  50.68 
 
 
229 aa  179  2.9999999999999997e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  47.22 
 
 
224 aa  179  4e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  49.3 
 
 
220 aa  178  4e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  45.79 
 
 
213 aa  178  4.999999999999999e-44  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  47.66 
 
 
220 aa  178  5.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3519  response regulator receiver protein  46.51 
 
 
220 aa  178  7e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  45.54 
 
 
220 aa  177  7e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  47.89 
 
 
213 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  46.95 
 
 
230 aa  176  2e-43  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  44.75 
 
 
223 aa  176  2e-43  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  45.87 
 
 
241 aa  176  3e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  42.25 
 
 
221 aa  176  3e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  45.58 
 
 
234 aa  176  3e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  48.86 
 
 
219 aa  176  3e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  45.29 
 
 
230 aa  175  4e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  45.33 
 
 
216 aa  175  5e-43  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  44.34 
 
 
216 aa  175  5e-43  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  46.54 
 
 
221 aa  175  6e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  48.13 
 
 
241 aa  174  7e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  48.61 
 
 
221 aa  174  7e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013159  Svir_32780  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.69 
 
 
216 aa  174  9e-43  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  45.58 
 
 
215 aa  174  9e-43  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  47.47 
 
 
227 aa  173  9.999999999999999e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  46.08 
 
 
219 aa  174  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  47.2 
 
 
225 aa  173  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  48.13 
 
 
215 aa  174  9.999999999999999e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  47.44 
 
 
221 aa  174  9.999999999999999e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  42.47 
 
 
224 aa  173  1.9999999999999998e-42  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  45.58 
 
 
220 aa  172  2.9999999999999996e-42  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  48.87 
 
 
225 aa  172  2.9999999999999996e-42  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  45.41 
 
 
224 aa  172  2.9999999999999996e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  50.23 
 
 
232 aa  172  3.9999999999999995e-42  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  44.39 
 
 
213 aa  172  3.9999999999999995e-42  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  46.79 
 
 
221 aa  171  5e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  46.19 
 
 
230 aa  171  5.999999999999999e-42  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  46.26 
 
 
225 aa  171  6.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  51.2 
 
 
215 aa  171  6.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  42.33 
 
 
231 aa  170  1e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  48.17 
 
 
247 aa  170  1e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  47.47 
 
 
211 aa  170  1e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  45.41 
 
 
215 aa  170  1e-41  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  46.12 
 
 
220 aa  170  2e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  45.66 
 
 
226 aa  170  2e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  46.26 
 
 
216 aa  169  2e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.4 
 
 
218 aa  170  2e-41  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.2 
 
 
225 aa  169  2e-41  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  44.19 
 
 
225 aa  170  2e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  40.19 
 
 
218 aa  170  2e-41  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  48.13 
 
 
214 aa  169  2e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  47.89 
 
 
229 aa  169  2e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  39.44 
 
 
216 aa  169  2e-41  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  45.87 
 
 
230 aa  169  3e-41  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  45.12 
 
 
219 aa  169  3e-41  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
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