More than 300 homologs were found in PanDaTox collection
for query gene Snas_4693 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_4693  extracellular solute-binding protein family 1  100 
 
 
457 aa  925    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.363745 
 
 
-
 
NC_013521  Sked_27350  ABC-type sugar transport system, periplasmic component  63.29 
 
 
444 aa  587  1e-166  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.404715  normal  0.481515 
 
 
-
 
NC_013530  Xcel_0063  extracellular solute-binding protein family 1  52.04 
 
 
475 aa  454  1.0000000000000001e-126  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0910  extracellular solute-binding protein family 1  39.47 
 
 
466 aa  318  1e-85  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.764586  normal 
 
 
-
 
NC_013525  Tter_1095  extracellular solute-binding protein family 1  33.5 
 
 
530 aa  216  8e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2526  extracellular solute-binding protein family 1  32.21 
 
 
520 aa  207  2e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000430481  n/a   
 
 
-
 
NC_013595  Sros_5409  ABC-type sugar transport system periplasmic component-like protein  34.29 
 
 
457 aa  185  1.0000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3703  extracellular solute-binding protein family 1  34.4 
 
 
466 aa  168  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0104923  normal 
 
 
-
 
NC_011661  Dtur_0175  extracellular solute-binding protein family 1  29.8 
 
 
458 aa  166  5.9999999999999996e-40  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3317  extracellular solute-binding protein  28.35 
 
 
492 aa  163  6e-39  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.0000000142443  n/a   
 
 
-
 
NC_013131  Caci_8464  extracellular solute-binding protein family 1  31.94 
 
 
481 aa  162  2e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.635867  normal  0.0842744 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  28.86 
 
 
444 aa  105  2e-21  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_009620  Smed_4159  extracellular solute-binding protein  26.69 
 
 
421 aa  98.2  3e-19  Sinorhizobium medicae WSM419  Bacteria  normal  0.119299  normal  0.873951 
 
 
-
 
NC_011369  Rleg2_3622  extracellular solute-binding protein family 1  27.16 
 
 
412 aa  97.1  6e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3910  extracellular solute-binding protein family 1  25.72 
 
 
412 aa  95.5  2e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.198843 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  25.24 
 
 
431 aa  90.5  6e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  24.64 
 
 
431 aa  87.8  4e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  30.34 
 
 
415 aa  87  7e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  24.37 
 
 
445 aa  86.3  0.000000000000001  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2146  extracellular solute-binding protein  29.36 
 
 
414 aa  85.5  0.000000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  26.38 
 
 
431 aa  85.1  0.000000000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  25.81 
 
 
439 aa  83.6  0.000000000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  30.13 
 
 
440 aa  82  0.00000000000002  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2659  extracellular solute-binding protein family 1  27.85 
 
 
431 aa  81.6  0.00000000000003  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00136924  n/a   
 
 
-
 
NC_012880  Dd703_3270  extracellular solute-binding protein family 1  29.49 
 
 
435 aa  80.1  0.00000000000008  Dickeya dadantii Ech703  Bacteria  normal  0.543416  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  27.27 
 
 
431 aa  79.7  0.00000000000009  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2846  extracellular solute-binding protein family 1  28.72 
 
 
435 aa  79  0.0000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.687638 
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  26.96 
 
 
425 aa  78.2  0.0000000000003  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_008783  BARBAKC583_0349  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  26.27 
 
 
441 aa  78.2  0.0000000000003  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2834  extracellular solute-binding protein  28.19 
 
 
459 aa  77.8  0.0000000000004  Frankia sp. CcI3  Bacteria  normal  0.873121  normal 
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  26.33 
 
 
436 aa  77.8  0.0000000000004  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_011094  SeSA_A3748  glycerol-3-phosphate transporter periplasmic binding protein  23.96 
 
 
438 aa  77  0.0000000000006  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3826  glycerol-3-phosphate transporter periplasmic binding protein  23.96 
 
 
438 aa  76.6  0.0000000000009  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3869  glycerol-3-phosphate transporter periplasmic binding protein  23.96 
 
 
438 aa  76.6  0.0000000000009  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3759  glycerol-3-phosphate transporter periplasmic binding protein  23.96 
 
 
438 aa  76.6  0.0000000000009  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13140  extracellular solute-binding protein family 1  26.52 
 
 
424 aa  76.3  0.000000000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  28.17 
 
 
415 aa  76.3  0.000000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_011205  SeD_A3928  glycerol-3-phosphate transporter periplasmic binding protein  23.96 
 
 
438 aa  76.3  0.000000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  25.7 
 
 
423 aa  76.3  0.000000000001  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_004311  BRA0655  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  23.66 
 
 
433 aa  75.1  0.000000000002  Brucella suis 1330  Bacteria  normal  0.454035  n/a   
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  27.73 
 
 
407 aa  75.1  0.000000000002  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  29.36 
 
 
464 aa  74.7  0.000000000003  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  28.16 
 
 
447 aa  75.1  0.000000000003  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  27.76 
 
 
441 aa  73.9  0.000000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6631  extracellular solute-binding protein family 1  28.93 
 
 
410 aa  73.9  0.000000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.325237 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  27.44 
 
 
414 aa  73.6  0.000000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  27.5 
 
 
437 aa  73.6  0.000000000007  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_011366  Rleg2_5687  extracellular solute-binding protein family 1  28.03 
 
 
401 aa  73.6  0.000000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.627079  normal 
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  30 
 
 
441 aa  73.2  0.000000000009  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  30 
 
 
441 aa  73.2  0.00000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  30 
 
 
441 aa  73.2  0.00000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  30 
 
 
441 aa  73.2  0.00000000001  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  30 
 
 
441 aa  73.2  0.00000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  30 
 
 
441 aa  73.2  0.00000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  26.23 
 
 
422 aa  72.4  0.00000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  27 
 
 
437 aa  71.6  0.00000000002  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_012669  Bcav_1296  extracellular solute-binding protein family 1  27.13 
 
 
443 aa  72.4  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_007651  BTH_I3021  glycerol-3-phosphate transporter periplasmic binding protein  28.97 
 
 
441 aa  71.2  0.00000000003  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0617  glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein  23.44 
 
 
444 aa  71.6  0.00000000003  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  25.56 
 
 
438 aa  70.9  0.00000000004  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  25.56 
 
 
438 aa  70.9  0.00000000004  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03255  hypothetical protein  25.56 
 
 
438 aa  70.9  0.00000000004  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  25.56 
 
 
438 aa  70.9  0.00000000004  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_010498  EcSMS35_3732  glycerol-3-phosphate transporter periplasmic binding protein  25.56 
 
 
438 aa  70.9  0.00000000004  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3655  glycerol-3-phosphate transporter periplasmic binding protein  25.23 
 
 
439 aa  70.9  0.00000000004  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  25.56 
 
 
438 aa  70.9  0.00000000004  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  25.56 
 
 
438 aa  70.9  0.00000000004  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3962  glycerol-3-phosphate transporter periplasmic binding protein  25.23 
 
 
439 aa  70.9  0.00000000005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  23.84 
 
 
444 aa  70.5  0.00000000005  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0256  glycerol-3-phosphate transporter periplasmic binding protein  25.23 
 
 
439 aa  70.9  0.00000000005  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0374  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
444 aa  70.5  0.00000000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2726  extracellular solute-binding protein  24.11 
 
 
437 aa  70.5  0.00000000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.290956  n/a   
 
 
-
 
NC_008060  Bcen_2712  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
443 aa  70.5  0.00000000006  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290307  n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  25.56 
 
 
438 aa  70.5  0.00000000006  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0395  glycerol-3-phosphate transporter periplasmic binding protein  28.57 
 
 
443 aa  70.5  0.00000000006  Burkholderia cenocepacia HI2424  Bacteria  normal  0.954301  n/a   
 
 
-
 
NC_009668  Oant_3750  extracellular solute-binding protein  23.93 
 
 
433 aa  70.1  0.00000000008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.316129  n/a   
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  25.11 
 
 
438 aa  70.1  0.00000000009  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3755  glycerol-3-phosphate transporter periplasmic binding protein  29.52 
 
 
441 aa  70.1  0.00000000009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_6240  ABC transporter substrate binding protein (maltose)  28.92 
 
 
407 aa  69.7  0.0000000001  Agrobacterium vitis S4  Bacteria  normal  0.0994607  n/a   
 
 
-
 
NC_012917  PC1_0631  extracellular solute-binding protein family 1  29.29 
 
 
435 aa  69.7  0.0000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0845  extracellular solute-binding protein family 1  28.79 
 
 
435 aa  69.7  0.0000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1881  extracellular solute-binding protein family 1  28.18 
 
 
445 aa  69.3  0.0000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000340671  n/a   
 
 
-
 
NC_009620  Smed_4644  extracellular solute-binding protein  30.24 
 
 
409 aa  69.7  0.0000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.0265502  normal  0.0904039 
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  22.26 
 
 
439 aa  68.6  0.0000000002  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1265  extracellular solute-binding protein family 1  25.45 
 
 
446 aa  68.6  0.0000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  21.9 
 
 
439 aa  68.9  0.0000000002  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_011369  Rleg2_3669  extracellular solute-binding protein family 1  26.91 
 
 
492 aa  68.2  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0448  glycerol-3-phosphate transporter periplasmic binding protein  23.8 
 
 
441 aa  68.6  0.0000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  29.02 
 
 
452 aa  68.2  0.0000000003  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  23.77 
 
 
457 aa  68.2  0.0000000003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5274  extracellular solute-binding protein family 1  23.66 
 
 
442 aa  67.8  0.0000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  34.62 
 
 
410 aa  67.8  0.0000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  34.62 
 
 
410 aa  67.8  0.0000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_008390  Bamb_0314  glycerol-3-phosphate transporter periplasmic binding protein  27.83 
 
 
444 aa  67.8  0.0000000004  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  21.61 
 
 
439 aa  67.8  0.0000000004  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_010084  Bmul_0298  glycerol-3-phosphate transporter periplasmic binding protein  27.83 
 
 
444 aa  67.8  0.0000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0323  glycerol-3-phosphate transporter periplasmic binding protein  27.83 
 
 
444 aa  67.8  0.0000000004  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.839712 
 
 
-
 
NC_012848  Rleg_4863  extracellular solute-binding protein family 1  26.51 
 
 
492 aa  67.4  0.0000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.426159 
 
 
-
 
NC_007510  Bcep18194_A3492  glycerol-3-phosphate transporter periplasmic binding protein  27.36 
 
 
444 aa  67.4  0.0000000005  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  23.26 
 
 
444 aa  67.4  0.0000000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
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