More than 300 homologs were found in PanDaTox collection
for query gene Snas_4479 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  100 
 
 
224 aa  430  1e-120  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  65.77 
 
 
226 aa  278  3e-74  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  68.92 
 
 
226 aa  278  4e-74  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  66.37 
 
 
227 aa  275  4e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009953  Sare_2352  two component LuxR family transcriptional regulator  69.27 
 
 
230 aa  273  1.0000000000000001e-72  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.139824 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  66.67 
 
 
239 aa  271  5.000000000000001e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  63.01 
 
 
218 aa  263  2e-69  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  65.16 
 
 
222 aa  255  4e-67  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_009380  Strop_2235  regulatory protein, LuxR  64.38 
 
 
231 aa  253  2.0000000000000002e-66  Salinispora tropica CNB-440  Bacteria  normal  0.422182  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  61.01 
 
 
221 aa  252  3e-66  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  60.27 
 
 
220 aa  249  3e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  63.55 
 
 
217 aa  246  2e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  58.04 
 
 
234 aa  244  9.999999999999999e-64  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.14 
 
 
229 aa  243  1.9999999999999999e-63  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  60.45 
 
 
225 aa  242  3.9999999999999997e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  57.92 
 
 
234 aa  241  6e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  58.37 
 
 
228 aa  241  7e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  55.98 
 
 
233 aa  241  7.999999999999999e-63  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.44 
 
 
236 aa  239  2e-62  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  56.62 
 
 
225 aa  239  2e-62  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  59.73 
 
 
223 aa  239  2.9999999999999997e-62  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  60.73 
 
 
225 aa  238  8e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  59.26 
 
 
220 aa  237  9e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  56.83 
 
 
229 aa  236  2e-61  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  57.27 
 
 
230 aa  236  2e-61  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  57.21 
 
 
227 aa  234  9e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.82 
 
 
226 aa  233  2.0000000000000002e-60  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  53.6 
 
 
231 aa  233  2.0000000000000002e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  57.41 
 
 
216 aa  232  3e-60  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  55.66 
 
 
221 aa  232  3e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  57.21 
 
 
225 aa  232  4.0000000000000004e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  52.63 
 
 
250 aa  231  5e-60  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  58.33 
 
 
220 aa  230  1e-59  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  57.6 
 
 
226 aa  229  2e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  56.11 
 
 
224 aa  229  2e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  56.22 
 
 
225 aa  229  3e-59  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  55.27 
 
 
239 aa  229  3e-59  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  53.46 
 
 
224 aa  228  5e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  52.84 
 
 
242 aa  227  1e-58  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  55.81 
 
 
213 aa  226  2e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  57.59 
 
 
226 aa  226  2e-58  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  54.79 
 
 
226 aa  226  3e-58  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  56.11 
 
 
225 aa  225  4e-58  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  55.96 
 
 
218 aa  225  4e-58  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  55.5 
 
 
222 aa  225  4e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  52.47 
 
 
241 aa  225  4e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  54.87 
 
 
241 aa  224  6e-58  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  54.34 
 
 
221 aa  224  6e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  57.08 
 
 
225 aa  223  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  54.84 
 
 
221 aa  223  2e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  52.53 
 
 
218 aa  223  2e-57  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.01 
 
 
244 aa  223  2e-57  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  55.76 
 
 
215 aa  223  3e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  56.02 
 
 
217 aa  222  4.9999999999999996e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  55.25 
 
 
224 aa  221  6e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  53.46 
 
 
219 aa  221  7e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  55.14 
 
 
239 aa  221  9e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.377169 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  56.36 
 
 
223 aa  221  9e-57  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  54.59 
 
 
241 aa  221  9e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  54.59 
 
 
220 aa  221  9.999999999999999e-57  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  53.88 
 
 
221 aa  220  9.999999999999999e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  53.3 
 
 
225 aa  220  1.9999999999999999e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  54.87 
 
 
230 aa  218  7e-56  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  54.13 
 
 
224 aa  218  7e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  54.05 
 
 
218 aa  217  8.999999999999998e-56  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  53.42 
 
 
220 aa  217  1e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  54.34 
 
 
230 aa  217  1e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  53.42 
 
 
219 aa  217  1e-55  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  48.39 
 
 
248 aa  217  1e-55  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  54.84 
 
 
215 aa  216  2e-55  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53 
 
 
234 aa  216  2e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  53 
 
 
217 aa  216  2e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  53.27 
 
 
214 aa  216  2.9999999999999998e-55  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.98 
 
 
230 aa  216  2.9999999999999998e-55  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  55.45 
 
 
247 aa  216  2.9999999999999998e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  51.95 
 
 
228 aa  216  2.9999999999999998e-55  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.61 
 
 
230 aa  216  2.9999999999999998e-55  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  53.18 
 
 
225 aa  216  2.9999999999999998e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.56 
 
 
261 aa  215  5e-55  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  52.78 
 
 
226 aa  215  5e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  50.86 
 
 
228 aa  215  5.9999999999999996e-55  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.45 
 
 
239 aa  214  9.999999999999999e-55  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  41.47 
 
 
261 aa  214  9.999999999999999e-55  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  55.5 
 
 
302 aa  214  9.999999999999999e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  53.6 
 
 
227 aa  214  9.999999999999999e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  52.78 
 
 
215 aa  213  1.9999999999999998e-54  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  50.45 
 
 
220 aa  213  1.9999999999999998e-54  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  53.36 
 
 
226 aa  213  1.9999999999999998e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  51.58 
 
 
223 aa  212  2.9999999999999995e-54  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  52 
 
 
230 aa  212  2.9999999999999995e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  51.15 
 
 
219 aa  212  3.9999999999999995e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013131  Caci_5719  two component transcriptional regulator, LuxR family  61.09 
 
 
232 aa  211  5.999999999999999e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  51.29 
 
 
234 aa  211  5.999999999999999e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  54.31 
 
 
235 aa  211  7e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  53.7 
 
 
221 aa  211  7e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  56.16 
 
 
222 aa  211  9e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  51.57 
 
 
232 aa  209  3e-53  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  51.14 
 
 
233 aa  209  3e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  50.45 
 
 
226 aa  209  3e-53  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.21 
 
 
225 aa  209  3e-53  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
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