More than 300 homologs were found in PanDaTox collection
for query gene Snas_3639 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  100 
 
 
215 aa  427  1e-119  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  91.63 
 
 
215 aa  389  1e-107  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  71.76 
 
 
218 aa  316  2e-85  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  71.03 
 
 
249 aa  297  7e-80  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  69.77 
 
 
218 aa  292  3e-78  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  70.09 
 
 
215 aa  291  4e-78  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  63.03 
 
 
232 aa  253  2.0000000000000002e-66  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  60.56 
 
 
215 aa  251  5.000000000000001e-66  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  60.19 
 
 
218 aa  250  9.000000000000001e-66  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_013947  Snas_0607  two component transcriptional regulator, LuxR family  57.94 
 
 
216 aa  244  4.9999999999999997e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7377  response regulator receiver protein  61.4 
 
 
216 aa  240  1e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.92051  normal 
 
 
-
 
NC_009664  Krad_2518  two component transcriptional regulator, LuxR family  58.6 
 
 
225 aa  239  2e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5550  two component transcriptional regulator, LuxR family  58.96 
 
 
213 aa  237  1e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159917  normal  0.0692801 
 
 
-
 
NC_013093  Amir_3004  two component transcriptional regulator, LuxR family  57.99 
 
 
223 aa  236  2e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0522265  n/a   
 
 
-
 
NC_013093  Amir_4001  two component transcriptional regulator, LuxR family  58.8 
 
 
217 aa  230  1e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.380782  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  54.88 
 
 
218 aa  224  5.0000000000000005e-58  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  54.21 
 
 
234 aa  224  7e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  54.13 
 
 
226 aa  220  9.999999999999999e-57  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  52.27 
 
 
225 aa  219  1.9999999999999999e-56  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  51.61 
 
 
225 aa  219  3e-56  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  50.94 
 
 
225 aa  216  2e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.64 
 
 
222 aa  216  2e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  53.74 
 
 
221 aa  216  2.9999999999999998e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  50.93 
 
 
223 aa  214  7e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  52.51 
 
 
226 aa  214  9.999999999999999e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  51.4 
 
 
219 aa  212  2.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  51.39 
 
 
215 aa  211  9e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  52.73 
 
 
226 aa  210  1e-53  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  51.6 
 
 
227 aa  209  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  50.93 
 
 
219 aa  206  2e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  51.61 
 
 
220 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  50.23 
 
 
219 aa  206  2e-52  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  49.77 
 
 
228 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  50.7 
 
 
218 aa  205  3e-52  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  51.61 
 
 
225 aa  205  4e-52  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  49.53 
 
 
219 aa  204  9e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  50.92 
 
 
224 aa  203  1e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  48.39 
 
 
225 aa  202  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  49.07 
 
 
217 aa  203  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  49.31 
 
 
220 aa  202  3e-51  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  50.24 
 
 
213 aa  202  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  47.37 
 
 
231 aa  201  6e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013595  Sros_6306  response regulator receiver protein  50.93 
 
 
209 aa  200  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0259699  normal  0.0492304 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  49.3 
 
 
221 aa  201  9.999999999999999e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  49.07 
 
 
220 aa  200  9.999999999999999e-51  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  52.58 
 
 
216 aa  200  9.999999999999999e-51  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  50.68 
 
 
241 aa  200  1.9999999999999998e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  50.23 
 
 
214 aa  199  1.9999999999999998e-50  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  52.47 
 
 
225 aa  199  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  50.23 
 
 
220 aa  198  3.9999999999999996e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  50 
 
 
229 aa  198  3.9999999999999996e-50  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  49.76 
 
 
211 aa  198  5e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  48.13 
 
 
224 aa  198  5e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  49.53 
 
 
222 aa  197  7e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  50.69 
 
 
226 aa  197  7.999999999999999e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  50.93 
 
 
221 aa  197  1.0000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  48.84 
 
 
220 aa  197  1.0000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  52.29 
 
 
224 aa  197  1.0000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  51.16 
 
 
215 aa  197  1.0000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  49.55 
 
 
224 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.78 
 
 
244 aa  196  3e-49  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  47.91 
 
 
218 aa  195  4.0000000000000005e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  50.45 
 
 
241 aa  195  5.000000000000001e-49  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  51.16 
 
 
215 aa  195  6e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  49.54 
 
 
215 aa  194  7e-49  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  50.47 
 
 
247 aa  194  7e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  50 
 
 
225 aa  194  9e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  49.3 
 
 
217 aa  194  9e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  52.07 
 
 
221 aa  193  2e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  50.92 
 
 
225 aa  193  2e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  48.84 
 
 
228 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  49.55 
 
 
224 aa  192  3e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  48.84 
 
 
220 aa  192  3e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  48.4 
 
 
228 aa  192  4e-48  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  46.48 
 
 
219 aa  191  6e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  48.67 
 
 
223 aa  191  6e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  47.95 
 
 
227 aa  191  7e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  50 
 
 
234 aa  190  1e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  47.71 
 
 
221 aa  189  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  47.47 
 
 
218 aa  189  2e-47  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  47.22 
 
 
224 aa  189  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.17 
 
 
258 aa  189  2.9999999999999997e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  50 
 
 
231 aa  189  2.9999999999999997e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  47.93 
 
 
239 aa  188  5e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.48 
 
 
222 aa  188  5e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  46.79 
 
 
221 aa  188  5e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  48.61 
 
 
226 aa  188  5.999999999999999e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  47.93 
 
 
230 aa  188  5.999999999999999e-47  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  46.12 
 
 
223 aa  188  5.999999999999999e-47  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  49.1 
 
 
216 aa  188  7e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  44.69 
 
 
228 aa  187  7e-47  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  49.54 
 
 
230 aa  188  7e-47  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013093  Amir_3219  two component transcriptional regulator, LuxR family  51.69 
 
 
208 aa  187  1e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  48.82 
 
 
220 aa  187  1e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  49.08 
 
 
221 aa  187  1e-46  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  47.25 
 
 
225 aa  187  1e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  47.35 
 
 
242 aa  187  1e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  49.08 
 
 
219 aa  187  1e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  41.2 
 
 
261 aa  186  2e-46  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  45.66 
 
 
224 aa  186  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
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