More than 300 homologs were found in PanDaTox collection
for query gene Snas_3122 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_3122  binding-protein-dependent transport systems inner membrane component  100 
 
 
305 aa  600  1.0000000000000001e-171  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.99861  hitchhiker  0.000381845 
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  51.66 
 
 
315 aa  303  4.0000000000000003e-81  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  51.99 
 
 
310 aa  300  3e-80  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  39.59 
 
 
316 aa  197  1.0000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  40.49 
 
 
300 aa  189  2.9999999999999997e-47  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
305 aa  182  8.000000000000001e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  38.71 
 
 
288 aa  179  4.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  39.11 
 
 
309 aa  176  3e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  35.98 
 
 
307 aa  176  4e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  38.08 
 
 
320 aa  176  4e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  37.54 
 
 
322 aa  176  4e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  35.98 
 
 
307 aa  176  4e-43  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
316 aa  176  5e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
318 aa  172  5e-42  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
292 aa  171  1e-41  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  38.8 
 
 
320 aa  171  1e-41  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
316 aa  170  2e-41  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  38.91 
 
 
310 aa  170  2e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
309 aa  170  3e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  35.08 
 
 
317 aa  170  3e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
319 aa  169  5e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  37.59 
 
 
318 aa  169  7e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_009565  TBFG_12339  sugar-transport integral membrane protein ABC transporter uspA  37.54 
 
 
290 aa  169  7e-41  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
297 aa  168  1e-40  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_4236  binding-protein-dependent transport systems inner membrane component  36.76 
 
 
294 aa  167  2.9999999999999998e-40  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4298  binding-protein-dependent transport systems inner membrane component  36.76 
 
 
294 aa  167  2.9999999999999998e-40  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.200183 
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  37.39 
 
 
319 aa  166  5.9999999999999996e-40  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  37.39 
 
 
319 aa  166  5.9999999999999996e-40  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
299 aa  166  5.9999999999999996e-40  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  38.15 
 
 
275 aa  165  6.9999999999999995e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  38.13 
 
 
309 aa  166  6.9999999999999995e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
310 aa  165  9e-40  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
294 aa  165  9e-40  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  37.02 
 
 
293 aa  165  1.0000000000000001e-39  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  35.36 
 
 
292 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  38.28 
 
 
306 aa  164  2.0000000000000002e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  36.08 
 
 
316 aa  164  2.0000000000000002e-39  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  35.06 
 
 
293 aa  163  4.0000000000000004e-39  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  35.23 
 
 
305 aa  163  4.0000000000000004e-39  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010483  TRQ2_0513  binding-protein-dependent transport systems inner membrane component  37.27 
 
 
285 aa  163  4.0000000000000004e-39  Thermotoga sp. RQ2  Bacteria  normal  0.195932  n/a   
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  35.61 
 
 
287 aa  162  5.0000000000000005e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_013205  Aaci_0796  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
312 aa  162  6e-39  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.633875  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  35.48 
 
 
317 aa  162  6e-39  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
299 aa  162  8.000000000000001e-39  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
309 aa  161  1e-38  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
317 aa  161  1e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
317 aa  161  1e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
314 aa  160  2e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013946  Mrub_0320  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
310 aa  160  2e-38  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
297 aa  160  3e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  34.42 
 
 
310 aa  159  4e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  36.54 
 
 
306 aa  159  4e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  36.19 
 
 
312 aa  159  4e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
294 aa  159  5e-38  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
291 aa  159  5e-38  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
299 aa  159  6e-38  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
319 aa  159  7e-38  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
316 aa  159  7e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  34.69 
 
 
293 aa  159  8e-38  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  39.83 
 
 
314 aa  159  8e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  39.81 
 
 
294 aa  157  1e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
305 aa  157  1e-37  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  36.86 
 
 
287 aa  157  2e-37  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  39.92 
 
 
315 aa  157  2e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  32.45 
 
 
300 aa  157  2e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_4197  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
326 aa  157  2e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.979447  normal 
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
317 aa  157  2e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  32.88 
 
 
308 aa  156  3e-37  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  33.67 
 
 
321 aa  156  4e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
307 aa  156  4e-37  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_008025  Dgeo_1168  binding-protein-dependent transport systems inner membrane component  39.18 
 
 
310 aa  155  6e-37  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.155614  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
309 aa  155  7e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  34.81 
 
 
292 aa  155  7e-37  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
315 aa  155  7e-37  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  30.07 
 
 
321 aa  155  7e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
279 aa  155  9e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
305 aa  154  1e-36  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_008820  P9303_15561  putative lactose transporter  36.59 
 
 
302 aa  154  2e-36  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.334934 
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  37.02 
 
 
311 aa  154  2e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
314 aa  154  2e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_010001  Cphy_0593  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
308 aa  154  2e-36  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000379306  n/a   
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  39.19 
 
 
306 aa  154  2e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
306 aa  153  4e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
305 aa  153  4e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_012854  Rleg_6527  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
307 aa  153  4e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0292278 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  34.7 
 
 
283 aa  152  5e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
420 aa  152  5e-36  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
296 aa  152  5e-36  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
296 aa  152  5.9999999999999996e-36  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_007513  Syncc9902_1051  lactose transport system permease protein  34.2 
 
 
306 aa  152  5.9999999999999996e-36  Synechococcus sp. CC9902  Bacteria  normal  0.390377  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  34.28 
 
 
313 aa  152  5.9999999999999996e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
319 aa  152  8e-36  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_008010  Dgeo_2820  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
305 aa  152  8.999999999999999e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  30.74 
 
 
315 aa  152  8.999999999999999e-36  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
290 aa  152  8.999999999999999e-36  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
317 aa  151  1e-35  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  36.46 
 
 
301 aa  151  1e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_007516  Syncc9605_1449  lactose transport system permease protein  35.19 
 
 
290 aa  151  1e-35  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0650773 
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
293 aa  151  1e-35  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4992  binding-protein-dependent transport systems inner membrane component  39.57 
 
 
291 aa  151  1e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.367922  normal  0.0195903 
 
 
-
 
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