More than 300 homologs were found in PanDaTox collection
for query gene Snas_2469 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  100 
 
 
214 aa  414  1e-115  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  66.04 
 
 
213 aa  251  7e-66  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  55.45 
 
 
224 aa  239  3e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  61.01 
 
 
224 aa  238  4e-62  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2190  two component transcriptional regulator, LuxR family  60.87 
 
 
218 aa  236  2e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  6.43495e-08  hitchhiker  0.000215707 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  59.45 
 
 
221 aa  230  1e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  56.62 
 
 
221 aa  228  6e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  54.98 
 
 
244 aa  224  6e-58  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  52.8 
 
 
220 aa  224  6e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  56.94 
 
 
216 aa  223  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  56.28 
 
 
222 aa  222  4e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  56.25 
 
 
229 aa  221  6e-57  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  58.06 
 
 
234 aa  220  1e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  55.5 
 
 
228 aa  219  2e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  57.67 
 
 
219 aa  219  3e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  55.25 
 
 
226 aa  219  3e-56  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  57.14 
 
 
225 aa  219  3e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  54.59 
 
 
225 aa  218  5e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  57.21 
 
 
219 aa  218  6e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  57.67 
 
 
219 aa  218  7e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  57.21 
 
 
219 aa  218  8e-56  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  55.76 
 
 
225 aa  218  8e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  54.26 
 
 
227 aa  217  8e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  56.19 
 
 
232 aa  217  9e-56  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  57.01 
 
 
221 aa  216  1e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  53.95 
 
 
221 aa  217  1e-55  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.74 
 
 
225 aa  217  1e-55  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  54.59 
 
 
218 aa  215  3e-55  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  57.41 
 
 
220 aa  216  3e-55  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  53.27 
 
 
218 aa  215  4e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  55 
 
 
226 aa  215  4e-55  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  55.81 
 
 
224 aa  215  5e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  56.31 
 
 
221 aa  214  1e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  54.88 
 
 
225 aa  213  1e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  57.73 
 
 
227 aa  214  1e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  57.27 
 
 
225 aa  213  2e-54  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  52.47 
 
 
228 aa  213  3e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  51.64 
 
 
215 aa  212  3e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  57.08 
 
 
220 aa  212  4e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.49 
 
 
239 aa  211  6e-54  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  55.09 
 
 
226 aa  211  7e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  52.07 
 
 
221 aa  211  8e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.62 
 
 
229 aa  210  1e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  50 
 
 
225 aa  210  2e-53  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.6 
 
 
230 aa  209  2e-53  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  55.56 
 
 
222 aa  209  3e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  51.6 
 
 
217 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  53.24 
 
 
225 aa  207  9e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  52.04 
 
 
231 aa  207  9e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.18 
 
 
230 aa  206  1e-52  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  52.05 
 
 
219 aa  207  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0533  two component LuxR family transcriptional regulator  57.67 
 
 
219 aa  206  2e-52  Frankia sp. EAN1pec  Bacteria  normal  0.405575  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  51.83 
 
 
223 aa  206  2e-52  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  53.6 
 
 
225 aa  206  3e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  54.21 
 
 
215 aa  206  3e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  56.16 
 
 
223 aa  206  3e-52  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  54.55 
 
 
230 aa  206  3e-52  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  53.95 
 
 
220 aa  206  3e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  55.66 
 
 
211 aa  206  3e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  55.4 
 
 
216 aa  205  4e-52  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  47.96 
 
 
230 aa  204  8e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  52.23 
 
 
227 aa  204  8e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  53.74 
 
 
224 aa  204  1e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  51.15 
 
 
218 aa  204  1e-51  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  53.27 
 
 
219 aa  204  1e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  57.67 
 
 
220 aa  203  1e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  53.95 
 
 
247 aa  203  1e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  51.83 
 
 
217 aa  204  1e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  7.94288e-08  unclonable  3.32591e-08 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  49.34 
 
 
228 aa  203  2e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.64 
 
 
222 aa  202  2e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  52.07 
 
 
225 aa  203  2e-51  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.11 
 
 
236 aa  202  2e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  56.16 
 
 
217 aa  203  2e-51  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  50.67 
 
 
241 aa  202  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  50.22 
 
 
223 aa  202  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  49.54 
 
 
230 aa  202  3e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  55.41 
 
 
224 aa  202  4e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  55 
 
 
223 aa  202  5e-51  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  3.86408e-05  hitchhiker  0.000570848 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  53.52 
 
 
215 aa  200  1e-50  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  49.77 
 
 
239 aa  200  1e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  52.29 
 
 
225 aa  201  1e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  51.58 
 
 
222 aa  200  1e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  51.83 
 
 
220 aa  199  2e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  50.44 
 
 
234 aa  199  2e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  51.17 
 
 
214 aa  199  3e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  52.61 
 
 
216 aa  199  3e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  51.17 
 
 
214 aa  199  4e-50  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  51.32 
 
 
249 aa  198  4e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  46.8 
 
 
258 aa  197  7e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  53.77 
 
 
226 aa  197  8e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  51.82 
 
 
220 aa  197  1e-49  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  50.65 
 
 
231 aa  197  1e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  51.91 
 
 
239 aa  196  2e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  52.97 
 
 
228 aa  196  2e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  50.92 
 
 
224 aa  196  2e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  51.39 
 
 
223 aa  196  2e-49  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  50 
 
 
220 aa  195  5e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  54.88 
 
 
302 aa  194  6e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  50.9 
 
 
234 aa  194  7e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_010816  BLD_0671  putative response regulator  47.52 
 
 
248 aa  194  7e-49  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
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