More than 300 homologs were found in PanDaTox collection
for query gene Snas_1903 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  100 
 
 
225 aa  442  1e-123  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  65.44 
 
 
215 aa  260  1e-68  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  63.51 
 
 
221 aa  256  1e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  61.19 
 
 
224 aa  254  9e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  63.3 
 
 
218 aa  254  1.0000000000000001e-66  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  61.16 
 
 
226 aa  248  4e-65  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  62.73 
 
 
221 aa  248  6e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  60.35 
 
 
228 aa  247  8e-65  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  59.65 
 
 
227 aa  247  1e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  61.01 
 
 
225 aa  246  2e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  60.73 
 
 
222 aa  246  2e-64  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  61.75 
 
 
225 aa  246  2e-64  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  60.99 
 
 
225 aa  246  3e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  62.56 
 
 
229 aa  244  6e-64  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  60.09 
 
 
218 aa  243  1.9999999999999999e-63  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  60.44 
 
 
225 aa  242  3e-63  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  63.76 
 
 
220 aa  241  5e-63  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  58.45 
 
 
219 aa  240  1e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  60.09 
 
 
216 aa  240  1e-62  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  58.45 
 
 
234 aa  239  2.9999999999999997e-62  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  60.27 
 
 
228 aa  238  4e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  59.19 
 
 
227 aa  238  5.999999999999999e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  61.64 
 
 
302 aa  237  8e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  57.99 
 
 
219 aa  238  8e-62  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  60.93 
 
 
226 aa  236  1e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  58.45 
 
 
225 aa  236  2e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  59.38 
 
 
226 aa  235  3e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  57.83 
 
 
234 aa  236  3e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  56.62 
 
 
219 aa  235  3e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  58.11 
 
 
224 aa  235  5.0000000000000005e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  57.08 
 
 
220 aa  234  8e-61  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  59.53 
 
 
217 aa  233  1.0000000000000001e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  62.21 
 
 
217 aa  233  2.0000000000000002e-60  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  59.82 
 
 
230 aa  232  4.0000000000000004e-60  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  58.53 
 
 
221 aa  231  8.000000000000001e-60  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  60.83 
 
 
221 aa  229  2e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  56.36 
 
 
228 aa  229  2e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  61.86 
 
 
247 aa  228  6e-59  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  58.04 
 
 
230 aa  228  7e-59  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  57.99 
 
 
224 aa  227  1e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  59.46 
 
 
222 aa  227  1e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  57.99 
 
 
219 aa  227  1e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  56.36 
 
 
218 aa  226  2e-58  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  57.8 
 
 
221 aa  226  2e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  59.38 
 
 
230 aa  225  4e-58  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  61.75 
 
 
220 aa  225  4e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  55.36 
 
 
226 aa  224  6e-58  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  55.86 
 
 
225 aa  224  9e-58  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  59.55 
 
 
225 aa  224  9e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  59.45 
 
 
217 aa  224  1e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  52.67 
 
 
250 aa  223  1e-57  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  53.48 
 
 
242 aa  224  1e-57  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  57.08 
 
 
224 aa  223  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  57.8 
 
 
221 aa  224  1e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  56.31 
 
 
228 aa  223  2e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  55.2 
 
 
241 aa  222  3e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  57.33 
 
 
227 aa  222  4e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  56.94 
 
 
220 aa  222  4e-57  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  55.36 
 
 
239 aa  222  4.9999999999999996e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  56.42 
 
 
215 aa  221  6e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  57.34 
 
 
222 aa  219  1.9999999999999999e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  57.66 
 
 
223 aa  220  1.9999999999999999e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  56.22 
 
 
225 aa  220  1.9999999999999999e-56  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  58.26 
 
 
221 aa  219  3e-56  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  54.71 
 
 
230 aa  219  3e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  56.36 
 
 
225 aa  219  3e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  52.05 
 
 
248 aa  219  3e-56  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  54.84 
 
 
218 aa  219  3.9999999999999997e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  56.36 
 
 
223 aa  218  5e-56  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  57.67 
 
 
215 aa  218  6e-56  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  54.59 
 
 
214 aa  218  6e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  56.68 
 
 
221 aa  218  7e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.81 
 
 
229 aa  218  7.999999999999999e-56  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  49.8 
 
 
258 aa  218  7.999999999999999e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.85 
 
 
261 aa  217  1e-55  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.95 
 
 
230 aa  217  1e-55  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  58.26 
 
 
220 aa  217  1e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  55.16 
 
 
226 aa  217  1e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  54.38 
 
 
220 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  56.88 
 
 
220 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  59.09 
 
 
224 aa  216  2.9999999999999998e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  59.81 
 
 
217 aa  215  4e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  57.21 
 
 
209 aa  215  5e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  56.74 
 
 
217 aa  214  5.9999999999999996e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  52.89 
 
 
230 aa  214  5.9999999999999996e-55  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  56.95 
 
 
241 aa  214  7e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  57.21 
 
 
225 aa  214  9e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  49.57 
 
 
233 aa  214  9.999999999999999e-55  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.85 
 
 
239 aa  213  9.999999999999999e-55  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  58.33 
 
 
211 aa  213  1.9999999999999998e-54  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  56.52 
 
 
234 aa  212  2.9999999999999995e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  53.04 
 
 
234 aa  213  2.9999999999999995e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  55.45 
 
 
211 aa  212  3.9999999999999995e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  55.91 
 
 
232 aa  212  3.9999999999999995e-54  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  55.65 
 
 
249 aa  211  4.9999999999999996e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.85 
 
 
226 aa  211  5.999999999999999e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  55.36 
 
 
244 aa  211  7e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013131  Caci_5878  two component transcriptional regulator, LuxR family  74.66 
 
 
441 aa  210  1e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.464013 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  53.54 
 
 
232 aa  211  1e-53  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  53.64 
 
 
226 aa  210  1e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
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