266 homologs were found in PanDaTox collection
for query gene Snas_1428 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_1428  large conductance mechanosensitive channel protein  100 
 
 
126 aa  243  8e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.144967  normal 
 
 
-
 
NC_008025  Dgeo_0305  large conductance mechanosensitive channel protein  59.84 
 
 
131 aa  130  7.999999999999999e-30  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.504961 
 
 
-
 
NC_013093  Amir_0624  large conductance mechanosensitive channel protein  48.8 
 
 
176 aa  112  2.0000000000000002e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.29249  n/a   
 
 
-
 
NC_013530  Xcel_2817  large conductance mechanosensitive channel protein  48.41 
 
 
130 aa  106  1e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.234312  n/a   
 
 
-
 
NC_014210  Ndas_4091  large conductance mechanosensitive channel protein  49.57 
 
 
135 aa  104  4e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.845287  normal  0.456703 
 
 
-
 
NC_014212  Mesil_2197  large conductance mechanosensitive channel protein  43.18 
 
 
132 aa  103  7e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  0.270032  normal 
 
 
-
 
NC_013510  Tcur_0902  large conductance mechanosensitive channel protein  47.2 
 
 
134 aa  103  1e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2624  large conductance mechanosensitive channel protein  47.69 
 
 
129 aa  102  2e-21  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.462758 
 
 
-
 
NC_013174  Jden_1972  large conductance mechanosensitive channel protein  40.94 
 
 
132 aa  102  2e-21  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7238  large conductance mechanosensitive channel protein  47.24 
 
 
129 aa  101  3e-21  Frankia sp. EAN1pec  Bacteria  normal  0.0390041  normal  0.160628 
 
 
-
 
NC_007777  Francci3_0070  large conductance mechanosensitive channel protein  47.24 
 
 
131 aa  100  5e-21  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1165  large conductance mechanosensitive channel protein  44.35 
 
 
122 aa  100  6e-21  Meiothermus ruber DSM 1279  Bacteria  normal  0.221389  normal  0.423534 
 
 
-
 
NC_013235  Namu_4648  large conductance mechanosensitive channel protein  44.88 
 
 
146 aa  99.4  1e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  0.508499  normal 
 
 
-
 
NC_013131  Caci_2291  large conductance mechanosensitive channel protein  45.86 
 
 
131 aa  97.4  5e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1383  large conductance mechanosensitive channel protein  44.83 
 
 
145 aa  97.4  6e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.190141  normal 
 
 
-
 
NC_008541  Arth_4049  large conductance mechanosensitive channel protein  46.15 
 
 
152 aa  95.9  1e-19  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1843  large conductance mechanosensitive channel protein  41.54 
 
 
126 aa  95.5  2e-19  Thermoanaerobacter sp. X514  Bacteria  normal  0.130997  n/a   
 
 
-
 
NC_008541  Arth_2915  large conductance mechanosensitive channel protein  44.7 
 
 
130 aa  95.9  2e-19  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_16810  mscL large conductance mechanosensitive channel protein  43.85 
 
 
140 aa  94.7  3e-19  Micrococcus luteus NCTC 2665  Bacteria  normal  0.230846  n/a   
 
 
-
 
NC_008686  Pden_2265  large conductance mechanosensitive channel protein  41.38 
 
 
145 aa  94.7  4e-19  Paracoccus denitrificans PD1222  Bacteria  normal  0.898824  normal  0.534464 
 
 
-
 
NC_014151  Cfla_0832  large conductance mechanosensitive channel protein  36.76 
 
 
201 aa  93.6  9e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.75118  normal 
 
 
-
 
NC_010816  BLD_1924  Large-conductance mechanosensitive channel  36.43 
 
 
168 aa  92.8  1e-18  Bifidobacterium longum DJO10A  Bacteria  normal  0.79206  n/a   
 
 
-
 
NC_013131  Caci_5645  large conductance mechanosensitive channel protein  45.24 
 
 
174 aa  93.2  1e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0366128  normal  0.120344 
 
 
-
 
NC_009921  Franean1_6488  large conductance mechanosensitive channel protein  46.34 
 
 
169 aa  92.4  2e-18  Frankia sp. EAN1pec  Bacteria  normal  0.182707  normal  0.360955 
 
 
-
 
NC_008530  LGAS_1657  large-conductance mechanosensitive channel  40.48 
 
 
125 aa  92  2e-18  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1408  large conductance mechanosensitive channel protein  44.09 
 
 
274 aa  91.3  4e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0090  large conductance mechanosensitive channel protein  40.3 
 
 
151 aa  89.7  1e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.343086  normal  0.118693 
 
 
-
 
NC_013172  Bfae_13070  large conductance mechanosensitive channel protein  41.79 
 
 
151 aa  89.4  1e-17  Brachybacterium faecium DSM 4810  Bacteria  hitchhiker  0.00812185  n/a   
 
 
-
 
NC_010551  BamMC406_1865  large-conductance mechanosensitive channel  35.62 
 
 
143 aa  89.4  2e-17  Burkholderia ambifaria MC40-6  Bacteria  normal  0.568071  hitchhiker  0.00372648 
 
 
-
 
NC_010508  Bcenmc03_1975  large-conductance mechanosensitive channel  35.62 
 
 
143 aa  89.4  2e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0443039 
 
 
-
 
NC_008146  Mmcs_4294  large-conductance mechanosensitive channel  42.86 
 
 
151 aa  89  2e-17  Mycobacterium sp. MCS  Bacteria  normal  0.485783  n/a   
 
 
-
 
NC_008390  Bamb_1938  large-conductance mechanosensitive channel  35.62 
 
 
143 aa  89.4  2e-17  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4380  large-conductance mechanosensitive channel  42.86 
 
 
151 aa  89  2e-17  Mycobacterium sp. KMS  Bacteria  normal  0.443969  normal  0.619354 
 
 
-
 
NC_013521  Sked_30610  large conductance mechanosensitive channel protein  37.9 
 
 
164 aa  88.6  3e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0156749  normal 
 
 
-
 
NC_008062  Bcen_6128  large-conductance mechanosensitive channel  34.93 
 
 
143 aa  88.2  3e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.316261  n/a   
 
 
-
 
NC_008542  Bcen2424_1951  large-conductance mechanosensitive channel  34.93 
 
 
143 aa  88.2  3e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0038  large conductance mechanosensitive channel protein  36.76 
 
 
136 aa  87.8  4e-17  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_3137  large conductance mechanosensitive channel protein  44.8 
 
 
127 aa  87.8  4e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4838  large-conductance mechanosensitive channel  46.36 
 
 
144 aa  87.8  4e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.619813 
 
 
-
 
NC_009513  Lreu_0317  large conductance mechanosensitive channel protein  36.22 
 
 
123 aa  87.4  6e-17  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.209684  n/a   
 
 
-
 
NC_007510  Bcep18194_A5262  large-conductance mechanosensitive channel  34.93 
 
 
143 aa  87  8e-17  Burkholderia sp. 383  Bacteria  normal  0.0455479  normal  0.24364 
 
 
-
 
NC_006348  BMA1501  large-conductance mechanosensitive channel  33.56 
 
 
143 aa  86.3  1e-16  Burkholderia mallei ATCC 23344  Bacteria  normal  0.917907  n/a   
 
 
-
 
NC_007651  BTH_I2079  large-conductance mechanosensitive channel  33.56 
 
 
143 aa  86.3  1e-16  Burkholderia thailandensis E264  Bacteria  normal  0.449669  n/a   
 
 
-
 
NC_008009  Acid345_0006  large conductance mechanosensitive channel protein  40.94 
 
 
138 aa  86.3  1e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0404291  normal  0.33248 
 
 
-
 
NC_008785  BMASAVP1_A2000  large-conductance mechanosensitive channel  33.56 
 
 
143 aa  86.3  1e-16  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3310  large-conductance mechanosensitive channel  33.56 
 
 
143 aa  86.3  1e-16  Burkholderia mallei NCTC 10229  Bacteria  decreased coverage  0.00104042  n/a   
 
 
-
 
NC_009074  BURPS668_2373  large-conductance mechanosensitive channel  33.56 
 
 
143 aa  86.3  1e-16  Burkholderia pseudomallei 668  Bacteria  normal  0.140991  n/a   
 
 
-
 
NC_009076  BURPS1106A_2415  large-conductance mechanosensitive channel  33.56 
 
 
143 aa  86.3  1e-16  Burkholderia pseudomallei 1106a  Bacteria  normal  0.258205  n/a   
 
 
-
 
NC_009080  BMA10247_1272  large-conductance mechanosensitive channel  33.56 
 
 
143 aa  86.3  1e-16  Burkholderia mallei NCTC 10247  Bacteria  normal  0.404097  n/a   
 
 
-
 
NC_007434  BURPS1710b_2521  large-conductance mechanosensitive channel  33.56 
 
 
199 aa  85.9  2e-16  Burkholderia pseudomallei 1710b  Bacteria  normal  0.334793  n/a   
 
 
-
 
NC_009077  Mjls_4672  large-conductance mechanosensitive channel  41.27 
 
 
151 aa  85.9  2e-16  Mycobacterium sp. JLS  Bacteria  normal  0.419542  normal  0.906592 
 
 
-
 
NC_013595  Sros_8656  large conductance mechanosensitive channel protein  44.54 
 
 
134 aa  84.3  4e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0457  large-conductance mechanosensitive channel  36.3 
 
 
163 aa  82  0.000000000000002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0992  large-conductance mechanosensitive channel  36.11 
 
 
140 aa  82.4  0.000000000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.158656  normal 
 
 
-
 
NC_008578  Acel_0156  large conductance mechanosensitive channel protein  51.43 
 
 
138 aa  82  0.000000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  0.024147  normal 
 
 
-
 
NC_013411  GYMC61_2162  large-conductance mechanosensitive channel  38.58 
 
 
126 aa  81.6  0.000000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013552  DhcVS_1168  large conductance mechanosensitive channel, MscL family  37.21 
 
 
157 aa  81.3  0.000000000000004  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00000144587  n/a   
 
 
-
 
NC_013169  Ksed_23920  large conductance mechanosensitive channel protein  42.19 
 
 
125 aa  81.3  0.000000000000004  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.814868 
 
 
-
 
NC_008527  LACR_2403  large-conductance mechanosensitive channel  38.1 
 
 
121 aa  81.6  0.000000000000004  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.000520108  n/a   
 
 
-
 
NC_014158  Tpau_3277  large conductance mechanosensitive channel protein  48.46 
 
 
148 aa  80.9  0.000000000000005  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.422663  n/a   
 
 
-
 
NC_007493  RSP_0724  large-conductance mechanosensitive channel  38.3 
 
 
146 aa  80.5  0.000000000000007  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4693  large-conductance mechanosensitive channel  34.53 
 
 
138 aa  79.3  0.00000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0941617 
 
 
-
 
NC_007406  Nwi_1928  large-conductance mechanosensitive channel  35.66 
 
 
139 aa  79.3  0.00000000000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.425698 
 
 
-
 
NC_007947  Mfla_0647  large conductance mechanosensitive channel protein  34.72 
 
 
139 aa  79.3  0.00000000000002  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_0712  large-conductance mechanosensitive channel  36.81 
 
 
142 aa  79.3  0.00000000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.23692 
 
 
-
 
NC_009455  DehaBAV1_1197  large-conductance mechanosensitive channel  36.92 
 
 
154 aa  79.3  0.00000000000002  Dehalococcoides sp. BAV1  Bacteria  normal  0.932903  n/a   
 
 
-
 
NC_012793  GWCH70_1285  large-conductance mechanosensitive channel  39.06 
 
 
131 aa  78.6  0.00000000000003  Geobacillus sp. WCH70  Bacteria  unclonable  0.00000000000347005  n/a   
 
 
-
 
NC_009049  Rsph17029_2379  large-conductance mechanosensitive channel  37.59 
 
 
146 aa  78.6  0.00000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.567154 
 
 
-
 
NC_012669  Bcav_0900  large conductance mechanosensitive channel protein  35.34 
 
 
166 aa  77.8  0.00000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.117504  normal 
 
 
-
 
NC_013165  Shel_09820  large conductance mechanosensitive channel protein  39.62 
 
 
132 aa  78.2  0.00000000000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.390629 
 
 
-
 
NC_007958  RPD_2641  large-conductance mechanosensitive channel  35.21 
 
 
143 aa  77.8  0.00000000000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.00276841 
 
 
-
 
NC_009505  BOV_0334  large-conductance mechanosensitive channel  36.17 
 
 
138 aa  77.8  0.00000000000005  Brucella ovis ATCC 25840  Bacteria  normal  0.0803754  n/a   
 
 
-
 
NC_009511  Swit_3455  large conductance mechanosensitive channel protein  37.67 
 
 
142 aa  77.4  0.00000000000005  Sphingomonas wittichii RW1  Bacteria  normal  0.0277457  normal  0.0882552 
 
 
-
 
NC_008531  LEUM_0618  large-conductance mechanosensitive channel  36.43 
 
 
127 aa  77.4  0.00000000000006  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0318  large-conductance mechanosensitive channel  36.17 
 
 
138 aa  77.4  0.00000000000007  Brucella suis 1330  Bacteria  normal  0.384644  n/a   
 
 
-
 
NC_006368  lpp2606  hypothetical protein  36.59 
 
 
127 aa  77  0.00000000000007  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_2342  large conductance mechanosensitive channel protein  40.48 
 
 
126 aa  77.4  0.00000000000007  Roseiflexus sp. RS-1  Bacteria  normal  0.998505  normal 
 
 
-
 
NC_010084  Bmul_1318  large-conductance mechanosensitive channel  34.25 
 
 
143 aa  76.3  0.0000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.212571  hitchhiker  0.00243459 
 
 
-
 
NC_009565  TBFG_11003  large-conductance mechanosensitive channel  42.06 
 
 
151 aa  76.3  0.0000000000001  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  5.00405e-34  normal  0.629119 
 
 
-
 
NC_007948  Bpro_0820  large-conductance mechanosensitive channel  33.79 
 
 
151 aa  76.3  0.0000000000001  Polaromonas sp. JS666  Bacteria  normal  0.577469  normal 
 
 
-
 
NC_012856  Rpic12D_2860  large-conductance mechanosensitive channel  33.33 
 
 
142 aa  76.3  0.0000000000001  Ralstonia pickettii 12D  Bacteria  normal  normal  0.219386 
 
 
-
 
NC_008528  OEOE_0850  large-conductance mechanosensitive channel  35.16 
 
 
129 aa  76.3  0.0000000000001  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0410  large-conductance mechanosensitive channel  34.75 
 
 
137 aa  76.3  0.0000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1956  large conductance mechanosensitive channel protein  37.5 
 
 
127 aa  76.3  0.0000000000001  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0941  large conductance mechanosensitive channel protein  35.21 
 
 
137 aa  75.9  0.0000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.954406  normal 
 
 
-
 
NC_009428  Rsph17025_2443  large-conductance mechanosensitive channel  37.5 
 
 
146 aa  75.5  0.0000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.954561  normal  0.582665 
 
 
-
 
NC_008254  Meso_0089  large conductance mechanosensitive channel protein  37.06 
 
 
142 aa  75.1  0.0000000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2607  large conductance mechanosensitive channel protein  34.93 
 
 
142 aa  75.1  0.0000000000003  Methylobacterium populi BJ001  Bacteria  normal  0.526175  normal  0.681771 
 
 
-
 
NC_012917  PC1_3793  large-conductance mechanosensitive channel  35.07 
 
 
137 aa  74.7  0.0000000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.832034  n/a   
 
 
-
 
NC_010682  Rpic_3207  large-conductance mechanosensitive channel  33.33 
 
 
142 aa  74.7  0.0000000000004  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0292  large-conductance mechanosensitive channel  33.1 
 
 
138 aa  73.9  0.0000000000007  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl2461  hypothetical protein  35.77 
 
 
127 aa  73.6  0.0000000000009  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007925  RPC_2630  large conductance mechanosensitive channel protein  35.21 
 
 
138 aa  73.6  0.0000000000009  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.425108  normal  0.108359 
 
 
-
 
NC_009720  Xaut_0055  large conductance mechanosensitive channel protein  34.04 
 
 
140 aa  73.6  0.0000000000009  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.153997 
 
 
-
 
NC_014230  CA2559_02405  large conductance mechanosensitive channel protein  33.8 
 
 
140 aa  73.6  0.000000000001  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.914683  n/a   
 
 
-
 
CP001637  EcDH1_0423  large conductance mechanosensitive channel protein  36.03 
 
 
136 aa  72.4  0.000000000002  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1409  large-conductance mechanosensitive channel  36.51 
 
 
120 aa  72.8  0.000000000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  decreased coverage  0.0000000924927  n/a   
 
 
-
 
NC_011353  ECH74115_4613  large-conductance mechanosensitive channel  36.03 
 
 
136 aa  72.4  0.000000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.000924287  normal 
 
 
-
 
NC_009632  SaurJH1_1436  large-conductance mechanosensitive channel  36.51 
 
 
120 aa  72.8  0.000000000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.0000000693237  n/a   
 
 
-
 
NC_010498  EcSMS35_3586  large-conductance mechanosensitive channel  36.03 
 
 
136 aa  72.4  0.000000000002  Escherichia coli SMS-3-5  Bacteria  normal  0.515412  normal  0.131611 
 
 
-
 
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