7 homologs were found in PanDaTox collection
for query gene Snas_0890 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_0890  LicD family protein  100 
 
 
454 aa  931  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.147531 
 
 
-
 
NC_013947  Snas_1495  LicD family protein  49.67 
 
 
454 aa  426  1e-118  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0889  LicD family protein  32.31 
 
 
373 aa  108  2e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.207748 
 
 
-
 
NC_008688  Pden_5030  hypothetical protein  35.6 
 
 
424 aa  103  5e-21  Paracoccus denitrificans PD1222  Bacteria  normal  0.118348  normal 
 
 
-
 
NC_012039  Cla_0296  hypothetical protein  25.47 
 
 
398 aa  98.2  3e-19  Campylobacter lari RM2100  Bacteria  normal  0.840944  n/a   
 
 
-
 
NC_008699  Noca_1451  methyltransferase type 11  31.14 
 
 
523 aa  53.1  1e-05  Nocardioides sp. JS614  Bacteria  normal  0.182574  n/a   
 
 
-
 
NC_008262  CPR_0463  hypothetical protein  22.28 
 
 
244 aa  45.4  0.002  Clostridium perfringens SM101  Bacteria  decreased coverage  2.02427e-06  n/a   
 
 
-
 
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